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BioLiP
Download all results in tab-seperated text for 816 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    601 6zng:C (2.72) BS02 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    602 6zng:D (2.72) BS01 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    603 6zng:D (2.72) BS02 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    604 6zng:E (2.72) BS01 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    605 6zng:E (2.72) BS02 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    606 6zng:F (2.72) BS01 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    607 6zng:F (2.72) BS02 ACO 1.1.1.40 GO:0000166 ... Q6MM14
    Q6MM15
    33623032
    608 6znt:A (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    609 6znt:A (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    610 6znt:B (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    611 6znt:B (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    612 6znt:C (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    613 6znt:C (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    614 6znt:D (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    615 6znt:D (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    616 6znt:E (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    617 6znt:E (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    618 6znt:F (1.96) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    619 6znt:F (1.96) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    620 6znu:A (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    621 6znu:A (2.33) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    622 6znu:B (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    623 6znu:B (2.33) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    624 6znu:C (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    625 6znu:D (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    626 6znu:D (2.33) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    627 6znu:E (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    628 6znu:E (2.33) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    629 6znu:G (2.33) BS01 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    630 6znu:G (2.33) BS02 ACO 1.1.1.40 GO:0016746 ... Q6MM15 33623032
    631 7ak7:A (2.14) BS01 ACO ? GO:0016747 ... Q8ZKC6 34556858
    632 7ak7:B (2.14) BS01 ACO ? GO:0016747 ... Q8ZKC6 34556858
    633 7ak8:A (2.5) BS01 ACO ? GO:0016747 ... Q8ZL98 34556858
    634 7ak8:B (2.5) BS01 ACO ? GO:0016747 ... Q8ZL98 34556858
    635 7ak8:C (2.5) BS01 ACO ? GO:0016747 ... Q8ZL98 34556858
    636 7ak8:D (2.5) BS01 ACO ? GO:0016747 ... Q8ZL98 34556858
    637 7ak8:E (2.5) BS01 ACO ? GO:0016747 ... Q8ZL98 34556858
    638 7ak8:F (2.5) BS01 ACO ? GO:0016747 ... Q8ZL98 34556858
    639 7b3a:A (1.34) BS01 ACO ? GO:0016740 ... A0A2L1TND5 35487884
    640 7c3o:A (1.89) BS01 ACO 2.3.1.48 GO:0004402 ... Q5AAJ8 N/A
    641 7civ:A (1.848) BS01 ACO 2.3.1.5 GO:0004059 ... Q9W469 N/A
    642 7cqt:A (2.8) BS01 ACO 2.3.3.10 GO:0004421 ... Q9M6U3 33340324
    643 7cqt:B (2.8) BS01 ACO 2.3.3.10 GO:0004421 ... Q9M6U3 33340324
    644 7daj:A (2.3) BS01 ACO 2.3.1.87 GO:0008080 ... Q5KQI6 33682300
    645 7daj:B (2.3) BS01 ACO 2.3.1.87 GO:0008080 ... Q5KQI6 33682300
    646 7dak:A (2.8) BS01 ACO 2.3.1.87 GO:0008080 ... Q5KQI6 33682300
    647 7dak:B (2.8) BS01 ACO 2.3.1.87 GO:0008080 ... Q5KQI6 33682300
    648 7dal:A (2.5) BS01 ACO 2.3.1.87 GO:0008080 ... Q5KQI6 33682300
    649 7dal:B (2.5) BS01 ACO 2.3.1.87 GO:0008080 ... Q5KQI6 33682300
    650 7dqg:A (2.21) BS01 ACO ? GO:0016740 ... G5DEI1 N/A
    651 7jm1:A (2.31) BS01 ACO ? GO:0016740 ... A0A1D0AST6 N/A
    652 7jm1:A (2.31) BS02 ACO ? GO:0016740 ... A0A1D0AST6 N/A
    653 7jm1:B (2.31) BS01 ACO ? GO:0016740 ... A0A1D0AST6 N/A
    654 7jm1:B (2.31) BS02 ACO ? GO:0016740 ... A0A1D0AST6 N/A
    655 7jm1:C (2.31) BS01 ACO ? GO:0016740 ... A0A1D0AST6 N/A
    656 7jm1:C (2.31) BS02 ACO ? GO:0016740 ... A0A1D0AST6 N/A
    657 7k09:A (2.313) BS01 ACO 2.3.-.- GO:0016746 ... P13249 33664348
    658 7k09:B (2.313) BS01 ACO 2.3.-.- GO:0016746 ... P13249 33664348
    659 7k09:C (2.313) BS01 ACO 2.3.-.- GO:0016746 ... P13249 33664348
    660 7k09:D (2.313) BS01 ACO 2.3.-.- GO:0016746 ... P13249 33664348
    661 7k09:E (2.313) BS01 ACO 2.3.-.- GO:0016746 ... P13249 33664348
    662 7k09:F (2.313) BS01 ACO 2.3.-.- GO:0016746 ... P13249 33664348
    663 7kps:B (1.8) BS01 ACO 2.3.1.- GO:0016746 ... Q9HX72 33912589
    664 7kr9:A (1.9) BS01 ACO 2.3.1.157
    2.7.7.23
    GO:0000287 ... Q04KU2 35021083
    665 7l7y:AAA (1.3) BS02 ACO ? GO:0000166 ... Q1QD33 33639157
    666 7lj9:B (3.0) BS02 ACO 2.3.3.8 GO:0003824 ... P53396 34294921
    667 7lj9:D (3.0) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 34294921
    668 7lla:A (2.97) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 34294921
    669 7lla:A (2.97) BS04 ACO 2.3.3.8 GO:0003824 ... P53396 34294921
    670 7lla:B (2.97) BS02 ACO 2.3.3.8 GO:0003824 ... P53396 34294921
    671 7lla:B (2.97) BS04 ACO 2.3.3.8 GO:0003824 ... P53396 34294921
    672 7lla:C (2.97) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 34294921
    673 7lla:C (2.97) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 34294921
    674 7lla:D (2.97) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 34294921
    675 7lla:D (2.97) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 34294921
    676 7ovu:A (1.45) BS01 ACO 2.3.1.48 GO:0005634 ... Q8S8E7 N/A
    677 7q3a:A (2.0) BS03 ACO ? GO:0000166 ... B1MJN9 35470425
    678 7q3a:B (2.0) BS03 ACO ? GO:0000166 ... B1MJN9 35470425
    679 7s45:A (1.2) BS02 ACO N/A GO:0016740 ... N/A 34651380
    680 7txq:A (1.65) BS02 ACO ? GO:0016740 ... A0A334FGR6 35277885
    681 7wtb:A (3.7) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    682 7wtb:A (3.7) BS03 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    683 7wtb:B (3.7) BS01 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    684 7wtb:B (3.7) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    685 7wtc:A (4.0) BS01 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    686 7wtc:A (4.0) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    687 7wtc:B (4.0) BS01 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    688 7wtc:B (4.0) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    689 7wte:C (3.3) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    690 7wte:C (3.3) BS03 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    691 7wte:D (3.3) BS01 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    692 7wte:D (3.3) BS02 ACO 6.4.1.1 GO:0003824 ... P11498 36283412
    693 7wx5:A (2.392) BS01 ACO ? GO:0016747 ... Q5C8M4 36048151
    694 7wx5:A (2.392) BS02 ACO ? GO:0016747 ... Q5C8M4 36048151
    695 7wx7:A (1.781) BS02 ACO ? GO:0016747 ... Q5C8M4 36048151
    696 7xwt:B (1.76) BS01 ACO ? GO:0008300 ... Q8RR28 36521700
    697 7zhc:A (1.819) BS01 ACO ? GO:0008080 ... A0A2K1KKM6 36786691
    698 7zhc:B (1.819) BS01 ACO ? GO:0008080 ... A0A2K1KKM6 36786691
    699 7zyy:A (2.12) BS05 ACO N/A GO:0003824 ... N/A 36261450
    700 7zyy:A (2.12) BS08 ACO N/A GO:0003824 ... N/A 36261450
    701 7zyy:B (2.12) BS05 ACO N/A GO:0003824 ... N/A 36261450
    702 7zyy:B (2.12) BS08 ACO N/A GO:0003824 ... N/A 36261450
    703 7zyy:C (2.12) BS01 ACO N/A GO:0003824 ... N/A 36261450
    704 7zyy:C (2.12) BS06 ACO N/A GO:0003824 ... N/A 36261450
    705 7zyy:D (2.12) BS01 ACO N/A GO:0003824 ... N/A 36261450
    706 7zyy:D (2.12) BS06 ACO N/A GO:0003824 ... N/A 36261450
    707 7zz3:A (2.41) BS06 ACO N/A GO:0003824 ... N/A 36261450
    708 7zz3:A (2.41) BS09 ACO N/A GO:0003824 ... N/A 36261450
    709 7zz3:B (2.41) BS05 ACO N/A GO:0003824 ... N/A 36261450
    710 7zz3:B (2.41) BS07 ACO N/A GO:0003824 ... N/A 36261450
    711 7zz3:C (2.41) BS01 ACO N/A GO:0003824 ... N/A 36261450
    712 7zz3:C (2.41) BS06 ACO N/A GO:0003824 ... N/A 36261450
    713 7zz3:D (2.41) BS01 ACO N/A GO:0003824 ... N/A 36261450
    714 7zz3:D (2.41) BS06 ACO N/A GO:0003824 ... N/A 36261450
    715 7zz4:A (2.63) BS02 ACO N/A GO:0003824 ... N/A 36261450
    716 7zz5:A (2.43) BS01 ACO N/A GO:0003824 ... N/A 36261450
    717 7zz8:A (3.29) BS04 ACO N/A GO:0003824 ... N/A 36261450
    718 7zz8:A (3.29) BS07 ACO N/A GO:0003824 ... N/A 36261450
    719 7zz8:B (3.29) BS04 ACO N/A GO:0003824 ... N/A 36261450
    720 7zz8:B (3.29) BS07 ACO N/A GO:0003824 ... N/A 36261450
    721 7zz8:C (3.29) BS01 ACO N/A GO:0003824 ... N/A 36261450
    722 7zz8:C (3.29) BS07 ACO N/A GO:0003824 ... N/A 36261450
    723 7zz8:D (3.29) BS02 ACO N/A GO:0003824 ... N/A 36261450
    724 7zz8:D (3.29) BS06 ACO N/A GO:0003824 ... N/A 36261450
    725 8a9o:B (1.587) BS01 ACO ? GO:0016020 ... V5VBK4 37316480
    726 8g1e:A (2.8) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    727 8g1e:A (2.8) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    728 8g1e:B (2.8) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    729 8g1e:B (2.8) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    730 8g1e:C (2.8) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    731 8g1e:C (2.8) BS05 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    732 8g1e:D (2.8) BS02 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    733 8g1f:A (2.4) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    734 8g1f:A (2.4) BS05 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    735 8g1f:B (2.4) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    736 8g1f:B (2.4) BS04 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    737 8g1f:C (2.4) BS02 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    738 8g1f:C (2.4) BS06 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    739 8g1f:D (2.4) BS02 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    740 8g1f:D (2.4) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    741 8g5d:A (2.5) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    742 8g5d:A (2.5) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    743 8g5d:B (2.5) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    744 8g5d:B (2.5) BS02 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    745 8g5d:C (2.5) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    746 8g5d:C (2.5) BS03 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    747 8g5d:D (2.5) BS01 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    748 8g5d:D (2.5) BS02 ACO 2.3.3.8 GO:0003824 ... P53396 37076498
    749 8gk8:A (2.68) BS03 ACO 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    750 8gk8:C (2.68) BS04 ACO 6.4.1.1 GO:0003824 ... A0A3A5LTU8 37603581
    751 8gqm:A (1.45) BS01 ACO ? GO:0003988 ... Q9HZQ7 N/A
    752 8i4r:A (2.51) BS02 ACO 6.2.1.5 GO:0003995 ... A0A4D5XMK4 N/A
    753 8iyo:A (2.4) BS01 ACO ? GO:0008080 ... O25589 N/A
    754 8iyo:B (2.4) BS01 ACO ? GO:0008080 ... O25589 N/A
    755 8iyo:C (2.4) BS01 ACO ? GO:0008080 ... O25589 N/A
    756 8iyo:D (2.4) BS01 ACO ? GO:0008080 ... O25589 N/A
    757 8jl1:A (2.8) BS01 ACO 2.3.1.78 GO:0005764 ... Q68CP4 N/A
    758 8jl1:B (2.8) BS01 ACO 2.3.1.78 GO:0005764 ... Q68CP4 N/A
    759 8jl3:A (2.59) BS01 ACO 2.3.1.78 GO:0005764 ... Q68CP4 N/A
    760 8jl3:B (2.59) BS01 ACO 2.3.1.78 GO:0005764 ... Q68CP4 N/A
    761 8k2v:G (3.52) BS02 ACO N/A GO:0002169 ... Q9HCC0 N/A
    762 8k2v:H (3.52) BS02 ACO N/A GO:0002169 ... Q9HCC0 N/A
    763 8k2v:I (3.52) BS03 ACO N/A GO:0002169 ... Q9HCC0 N/A
    764 8k2v:J (3.52) BS02 ACO N/A GO:0002169 ... Q9HCC0 N/A
    765 8k2v:K (3.52) BS01 ACO N/A GO:0002169 ... Q9HCC0 N/A
    766 8k2v:L (3.52) BS01 ACO N/A GO:0002169 ... Q9HCC0 N/A
    767 8p5s:A (2.459) BS02 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    768 8p5t:A (2.17) BS02 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    769 8p5t:B (2.17) BS03 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    770 8p5t:C (2.17) BS02 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    771 8p5t:D (2.17) BS03 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    772 8p5t:E (2.17) BS02 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    773 8p5t:F (2.17) BS03 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    774 8p5u:A (2.17) BS03 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    775 8p5u:B (2.17) BS04 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    776 8p5u:C (2.17) BS03 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    777 8p5u:D (2.17) BS04 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    778 8p5u:E (2.17) BS03 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    779 8p5u:F (2.17) BS04 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    780 8p5v:A (2.07) BS02 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    781 8p5v:B (2.07) BS03 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    782 8p5v:C (2.07) BS02 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    783 8p5v:D (2.07) BS04 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    784 8p5v:E (2.07) BS03 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    785 8p5v:F (2.07) BS04 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    786 8p5w:A (2.26) BS02 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    787 8p5w:B (2.26) BS03 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    788 8p5w:C (2.26) BS02 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    789 8p5w:D (2.26) BS03 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    790 8p5w:E (2.26) BS02 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    791 8p5w:F (2.26) BS03 ACO 1.2.4.2
    2.3.1.61
    GO:0000287 ... Q8NRC3 37563123
    792 8ptx:C (2.87) BS03 ACO 2.3.1.311 GO:0000049 ... Q9H9T3 38750017
    793 8tu9:A (3.26) BS01 ACO 2.3.1.78 GO:0003674 ... P42212
    Q68CP4
    39196614
    794 8tu9:B (3.26) BS01 ACO 2.3.1.78 GO:0003674 ... P42212
    Q68CP4
    39196614
    795 8vkj:A (2.92) BS01 ACO N/A GO:0005764 ... Q68CP4 N/A
    796 8vkj:B (2.92) BS01 ACO N/A GO:0005764 ... Q68CP4 N/A
    797 8vlg:A (3.15) BS01 ACO N/A GO:0005764 ... Q68CP4 N/A
    798 8vlg:B (3.15) BS01 ACO N/A GO:0005764 ... Q68CP4 N/A
    799 8vr7:A (1.9) BS01 ACO ? GO:0016740 ... Q1QD51 N/A
    800 8vr7:A (1.9) BS02 ACO ? GO:0016740 ... Q1QD51 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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