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BioLiP
Download all results in tab-seperated text for 11 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 3a0k:E (1.8) BS03 ABA ? GO:0030246 ... D5MNX4 21277932
    2 3a0k:E (1.8) BS04 ABA ? GO:0030246 ... D5MNX4 21277932
    3 3a0k:G (1.8) BS01 ABA ? GO:0030246 ... D5MNX4 21277932
    4 3a0k:G (1.8) BS04 ABA ? GO:0030246 ... D5MNX4 21277932
    5 3vnr:A (1.75) BS02 ABA N/A N/A N/A N/A
    6 4r18:K (2.4) BS01 ABA 3.4.25.1 GO:0004298 ... P30656 25244435 PDBbind: -logKd/Ki=7.68, IC50=21nM
    7 4r18:Y (2.4) BS01 ABA 3.4.25.1 GO:0004298 ... P30656 25244435
    8 6bxm:B (2.252) BS02 ABA 2.5.1.108 GO:0016740 ... A0A062UZ78 29590073
    9 8bgl:A (2.0) BS01 ABA ? GO:0006091 ... D1MPT3 36748340
    10 8bgl:B (2.0) BS01 ABA ? GO:0006091 ... D1MPT3 36748340
    11 9jdw:A (2.5) BS01 ABA 2.1.4.1 GO:0005515 ... P50440 9915841
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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