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BioLiP
Download all results in tab-seperated text for 37 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7w2d:A (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    2 7w2d:B (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    3 7w2d:C (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    4 7w2d:D (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    5 7w2d:E (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    6 7w2d:F (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    7 7w2d:G (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    8 7w2d:H (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    9 7w2d:I (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    10 7w2d:J (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    11 7w2d:K (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    12 7w2d:L (3.471) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    13 7w2h:A (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    14 7w2h:B (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    15 7w2h:C (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    16 7w2h:D (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    17 7w2h:E (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    18 7w2h:F (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    19 7w2h:G (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    20 7w2h:H (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    21 7w2h:I (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    22 7w2h:J (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    23 7w2h:K (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    24 7w2h:L (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    25 7w2h:M (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    26 7w2h:N (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    27 7w2h:O (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    28 7w2h:P (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    29 7w2h:P (3.796) BS02 88E ? GO:0005634 ... Q6DCU6 35273182
    30 7w2h:Q (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    31 7w2h:R (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    32 7w2h:S (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    33 7w2h:T (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    34 7w2h:U (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    35 7w2h:V (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    36 7w2h:W (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    37 7w2h:X (3.796) BS01 88E ? GO:0005634 ... Q6DCU6 35273182
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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