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BioLiP
Download all results in tab-seperated text for 26 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7vtp:A (3.23) BS02 7YN 3.6.4.- N/A Q96P20 35254907
    2 7vtp:B (3.23) BS02 7YN 3.6.4.- N/A Q96P20 35254907
    3 7vtp:C (3.23) BS02 7YN 3.6.4.- N/A Q96P20 35254907
    4 7vtp:D (3.23) BS02 7YN 3.6.4.- N/A Q96P20 35254907
    5 7vtp:E (3.23) BS02 7YN 3.6.4.- N/A Q96P20 35254907
    6 7vtp:F (3.23) BS02 7YN 3.6.4.- N/A Q96P20 35254907
    7 7vtq:A (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    8 7vtq:B (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    9 7vtq:C (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    10 7vtq:D (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    11 7vtq:E (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    12 7vtq:F (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    13 7vtq:G (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    14 7vtq:H (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    15 7vtq:I (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    16 7vtq:J (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    17 7vtq:K (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    18 7vtq:L (3.55) BS02 7YN 3.6.4.- GO:0000139 ... Q8R4B8 35254907
    19 8swk:A (4.32) BS01 7YN 3.6.4.- N/A Q96P20 N/A
    20 8swk:B (4.32) BS01 7YN 3.6.4.- N/A Q96P20 N/A
    21 8swk:C (4.32) BS01 7YN 3.6.4.- N/A Q96P20 N/A
    22 8swk:D (4.32) BS01 7YN 3.6.4.- N/A Q96P20 N/A
    23 8swk:E (4.32) BS01 7YN 3.6.4.- N/A Q96P20 N/A
    24 8swk:F (4.32) BS01 7YN 3.6.4.- N/A Q96P20 N/A
    25 8sxn:C (4.04) BS01 7YN 3.6.4.- N/A Q96P20 N/A
    26 8sxn:D (4.04) BS01 7YN 3.6.4.- N/A Q96P20 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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