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BioLiP
Download all results in tab-seperated text for 40 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5m26:B (1.9) BS02 7DV 1.13.11.- GO:0046872 ... F8TW83 28232026
    2 5m26:D (1.9) BS02 7DV 1.13.11.- GO:0046872 ... F8TW83 28232026
    3 5m26:F (1.9) BS02 7DV 1.13.11.- GO:0046872 ... F8TW83 28232026
    4 5m26:H (1.9) BS02 7DV 1.13.11.- GO:0046872 ... F8TW83 28232026
    5 8h5a:A (2.803) BS01 7DV ? N/A P67660 37822509
    6 8h5a:A (2.803) BS02 7DV ? N/A P67660 37822509
    7 8h5a:B (2.803) BS01 7DV ? N/A P67660 37822509
    8 8h5a:B (2.803) BS02 7DV ? N/A P67660 37822509
    9 8h5a:C (2.803) BS01 7DV ? N/A P67660 37822509
    10 8h5a:C (2.803) BS02 7DV ? N/A P67660 37822509
    11 8h5a:D (2.803) BS01 7DV ? N/A P67660 37822509
    12 8h5a:D (2.803) BS02 7DV ? N/A P67660 37822509
    13 8h5a:D (2.803) BS03 7DV ? N/A P67660 37822509
    14 8h5a:E (2.803) BS01 7DV ? N/A P67660 37822509
    15 8h5a:E (2.803) BS02 7DV ? N/A P67660 37822509
    16 8h5a:E (2.803) BS03 7DV ? N/A P67660 37822509
    17 8h5a:F (2.803) BS01 7DV ? N/A P67660 37822509
    18 8h5a:F (2.803) BS02 7DV ? N/A P67660 37822509
    19 8h5a:G (2.803) BS01 7DV ? N/A P67660 37822509
    20 8h5a:G (2.803) BS02 7DV ? N/A P67660 37822509
    21 8h5a:G (2.803) BS03 7DV ? N/A P67660 37822509
    22 8h5a:H (2.803) BS01 7DV ? N/A P67660 37822509
    23 8h5a:H (2.803) BS02 7DV ? N/A P67660 37822509
    24 8h5a:H (2.803) BS03 7DV ? N/A P67660 37822509
    25 8h5a:I (2.803) BS01 7DV ? N/A P67660 37822509
    26 8h5a:I (2.803) BS02 7DV ? N/A P67660 37822509
    27 8h5a:J (2.803) BS01 7DV ? N/A P67660 37822509
    28 8h5a:J (2.803) BS02 7DV ? N/A P67660 37822509
    29 8h5a:K (2.803) BS01 7DV ? N/A P67660 37822509
    30 8h5a:K (2.803) BS02 7DV ? N/A P67660 37822509
    31 8h5a:L (2.803) BS01 7DV ? N/A P67660 37822509
    32 8h5a:L (2.803) BS02 7DV ? N/A P67660 37822509
    33 8h5a:M (2.803) BS01 7DV ? N/A P67660 37822509
    34 8h5a:M (2.803) BS02 7DV ? N/A P67660 37822509
    35 8h5a:N (2.803) BS01 7DV ? N/A P67660 37822509
    36 8h5a:N (2.803) BS02 7DV ? N/A P67660 37822509
    37 8h5a:O (2.803) BS01 7DV ? N/A P67660 37822509
    38 8h5a:P (2.803) BS01 7DV ? N/A P67660 37822509
    39 8h5a:P (2.803) BS02 7DV ? N/A P67660 37822509
    40 8h5a:P (2.803) BS03 7DV ? N/A P67660 37822509
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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