Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 151 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 1 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5irx:A (2.95) BS03 6EU ? GO:0005216 ... O35433 27281200 BindingDB: Ki=0.13nM, IC50=180nM
    2 5irx:A (2.95) BS04 6EU ? GO:0005216 ... O35433 27281200 BindingDB: Ki=0.13nM, IC50=180nM
    3 5irx:B (2.95) BS01 6EU ? GO:0005216 ... O35433 27281200 BindingDB: Ki=0.13nM, IC50=180nM
    4 5irx:B (2.95) BS03 6EU ? GO:0005216 ... O35433 27281200 BindingDB: Ki=0.13nM, IC50=180nM
    5 5irx:C (2.95) BS02 6EU ? GO:0005216 ... O35433 27281200 BindingDB: Ki=0.13nM, IC50=180nM
    6 5irx:C (2.95) BS03 6EU ? GO:0005216 ... O35433 27281200 BindingDB: Ki=0.13nM, IC50=180nM
    7 5irx:D (2.95) BS01 6EU ? GO:0005216 ... O35433 27281200 BindingDB: Ki=0.13nM, IC50=180nM
    8 5irx:D (2.95) BS04 6EU ? GO:0005216 ... O35433 27281200 BindingDB: Ki=0.13nM, IC50=180nM
    9 6bwj:A (3.1) BS01 6EU ? GO:0005216 ... G1SNM3 29728656
    10 6bwj:A (3.1) BS02 6EU ? GO:0005216 ... G1SNM3 29728656
    11 6bwj:B (3.1) BS01 6EU ? GO:0005216 ... G1SNM3 29728656
    12 6oo3:A (2.9) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    13 6oo3:B (2.9) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    14 6oo3:C (2.9) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    15 6oo3:D (2.9) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    16 6oo4:A (3.3) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    17 6oo4:A (3.3) BS02 6EU ? GO:0005216 ... G1SNM3 31090543
    18 6oo4:B (3.3) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    19 6oo4:B (3.3) BS02 6EU ? GO:0005216 ... G1SNM3 31090543
    20 6oo4:C (3.3) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    21 6oo4:C (3.3) BS02 6EU ? GO:0005216 ... G1SNM3 31090543
    22 6oo4:D (3.3) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    23 6oo4:D (3.3) BS02 6EU ? GO:0005216 ... G1SNM3 31090543
    24 6oo5:A (4.2) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    25 6oo5:B (4.2) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    26 6oo5:C (4.2) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    27 6oo5:D (4.2) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    28 6oo7:A (3.8) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    29 6oo7:A (3.8) BS02 6EU ? GO:0005216 ... G1SNM3 31090543
    30 6oo7:B (3.8) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    31 6oo7:C (3.8) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    32 6oo7:C (3.8) BS02 6EU ? GO:0005216 ... G1SNM3 31090543
    33 6oo7:D (3.8) BS01 6EU ? GO:0005216 ... G1SNM3 31090543
    34 7l2l:A (3.42) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    35 7l2l:A (3.42) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    36 7l2l:B (3.42) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    37 7l2l:B (3.42) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    38 7l2l:C (3.42) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    39 7l2l:C (3.42) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    40 7l2l:D (3.42) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    41 7l2l:D (3.42) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    42 7l2m:A (3.84) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    43 7l2m:B (3.84) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    44 7l2m:C (3.84) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    45 7l2m:D (3.84) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    46 7l2n:A (3.09) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    47 7l2n:A (3.09) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    48 7l2n:B (3.09) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    49 7l2n:B (3.09) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    50 7l2n:C (3.09) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    51 7l2n:C (3.09) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    52 7l2n:D (3.09) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    53 7l2n:D (3.09) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    54 7l2o:A (3.64) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    55 7l2o:B (3.64) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    56 7l2o:C (3.64) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    57 7l2o:D (3.64) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    58 7l2v:A (3.64) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    59 7l2v:B (3.64) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    60 7l2v:C (3.64) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    61 7l2v:D (3.64) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    62 7l2w:A (3.16) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    63 7l2w:A (3.16) BS02 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    64 7l2w:B (3.16) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    65 7l2w:B (3.16) BS02 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    66 7l2w:C (3.16) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    67 7l2w:C (3.16) BS02 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    68 7l2w:D (3.16) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    69 7l2w:D (3.16) BS02 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    70 7l2x:A (3.26) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    71 7l2x:A (3.26) BS03 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    72 7l2x:B (3.26) BS02 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    73 7l2x:C (3.26) BS03 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    74 7l2x:D (3.26) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    75 7l2x:D (3.26) BS02 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    76 7lqz:A (3.41) BS01 6EU ? GO:0000122 ... I3LZN5 33846324
    77 7lqz:A (3.41) BS02 6EU ? GO:0000122 ... I3LZN5 33846324
    78 7lqz:B (3.41) BS01 6EU ? GO:0000122 ... I3LZN5 33846324
    79 7lqz:B (3.41) BS02 6EU ? GO:0000122 ... I3LZN5 33846324
    80 7lqz:C (3.41) BS01 6EU ? GO:0000122 ... I3LZN5 33846324
    81 7lqz:C (3.41) BS02 6EU ? GO:0000122 ... I3LZN5 33846324
    82 7lqz:D (3.41) BS01 6EU ? GO:0000122 ... I3LZN5 33846324
    83 7lqz:D (3.41) BS02 6EU ? GO:0000122 ... I3LZN5 33846324
    84 7mz5:A (2.76) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    85 7mz5:A (2.76) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    86 7mz5:B (2.76) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    87 7mz5:B (2.76) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    88 7mz5:C (2.76) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    89 7mz5:C (2.76) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    90 7mz5:D (2.76) BS01 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    91 7mz5:D (2.76) BS02 6EU ? GO:0000122 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    92 7mz7:A (3.35) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    93 7mz7:B (3.35) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    94 7mz7:C (3.35) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    95 7mz7:D (3.35) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    96 7mz9:A (3.18) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    97 7mza:C (3.46) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    98 7mza:D (3.46) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    99 7mzb:B (3.72) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    100 7mzb:C (3.72) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    101 7mzb:D (3.72) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    102 7mzc:A (3.03) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    103 7mzc:A (3.03) BS02 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    104 7mzc:B (3.03) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    105 7mzc:B (3.03) BS02 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    106 7mzc:C (3.03) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    107 7mzc:C (3.03) BS02 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    108 7mzc:D (3.03) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    109 7mzc:D (3.03) BS02 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    110 7mzd:A (2.9) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    111 7mzd:B (2.9) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    112 7mzd:C (2.9) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    113 7mzd:D (2.9) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    114 7mze:B (3.42) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    115 7mze:D (3.42) BS01 6EU ? GO:0005216 ... O35433 34496225 BindingDB: Ki=0.13nM, IC50=180nM
    116 7rqu:A (3.05) BS01 6EU ? GO:0000122 ... O35433 35610228
    117 7rqu:B (3.05) BS04 6EU ? GO:0000122 ... O35433 35610228
    118 7rqu:C (3.05) BS01 6EU ? GO:0000122 ... O35433 35610228
    119 7rqu:D (3.05) BS04 6EU ? GO:0000122 ... O35433 35610228
    120 7rqv:A (3.45) BS04 6EU ? GO:0000122 ... O35433 35610228
    121 7rqv:B (3.45) BS05 6EU ? GO:0000122 ... O35433 35610228
    122 7rqv:C (3.45) BS04 6EU ? GO:0000122 ... O35433 35610228
    123 7rqv:D (3.45) BS04 6EU ? GO:0000122 ... O35433 35610228
    124 7rqw:A (3.11) BS01 6EU ? GO:0000122 ... O35433 35610228
    125 7rqw:A (3.11) BS04 6EU ? GO:0000122 ... O35433 35610228
    126 7rqw:B (3.11) BS01 6EU ? GO:0000122 ... O35433 35610228
    127 7rqw:B (3.11) BS04 6EU ? GO:0000122 ... O35433 35610228
    128 7rqw:C (3.11) BS01 6EU ? GO:0000122 ... O35433 35610228
    129 7rqw:C (3.11) BS04 6EU ? GO:0000122 ... O35433 35610228
    130 7rqw:D (3.11) BS02 6EU ? GO:0000122 ... O35433 35610228
    131 7rqw:D (3.11) BS04 6EU ? GO:0000122 ... O35433 35610228
    132 7rqx:A (3.36) BS03 6EU ? GO:0000122 ... O35433 35610228
    133 7rqx:B (3.36) BS05 6EU ? GO:0000122 ... O35433 35610228
    134 7rqx:C (3.36) BS03 6EU ? GO:0000122 ... O35433 35610228
    135 7rqx:D (3.36) BS05 6EU ? GO:0000122 ... O35433 35610228
    136 7rqy:A (3.04) BS01 6EU ? GO:0000122 ... O35433 35610228
    137 7rqy:A (3.04) BS04 6EU ? GO:0000122 ... O35433 35610228
    138 7rqy:B (3.04) BS01 6EU ? GO:0000122 ... O35433 35610228
    139 7rqy:B (3.04) BS04 6EU ? GO:0000122 ... O35433 35610228
    140 7rqy:C (3.04) BS01 6EU ? GO:0000122 ... O35433 35610228
    141 7rqy:C (3.04) BS02 6EU ? GO:0000122 ... O35433 35610228
    142 7rqy:D (3.04) BS01 6EU ? GO:0000122 ... O35433 35610228
    143 7rqy:D (3.04) BS02 6EU ? GO:0000122 ... O35433 35610228
    144 7rqz:A (3.32) BS01 6EU ? GO:0000122 ... O35433 35610228
    145 7rqz:A (3.32) BS04 6EU ? GO:0000122 ... O35433 35610228
    146 7rqz:B (3.32) BS01 6EU ? GO:0000122 ... O35433 35610228
    147 7rqz:B (3.32) BS02 6EU ? GO:0000122 ... O35433 35610228
    148 7rqz:C (3.32) BS01 6EU ? GO:0000122 ... O35433 35610228
    149 7rqz:C (3.32) BS02 6EU ? GO:0000122 ... O35433 35610228
    150 7rqz:D (3.32) BS01 6EU ? GO:0000122 ... O35433 35610228
    151 7rqz:D (3.32) BS03 6EU ? GO:0000122 ... O35433 35610228
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218