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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 393 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    201 6sjj:R (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    202 6sjj:R (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    203 6sjj:R (2.3) BS05 2AN ? GO:0004864 ... A0A160HRF0 32627738
    204 6sjj:S (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    205 6sjj:S (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    206 6sjj:S (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    207 6sjj:S (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    208 6sjj:T (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    209 6sjj:T (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    210 6sjj:T (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    211 6sjj:T (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    212 6sjj:U (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    213 6sjj:U (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    214 6sjj:V (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    215 6sjj:V (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    216 6sjj:V (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    217 6sjj:V (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    218 6sjj:V (2.3) BS05 2AN ? GO:0004864 ... A0A160HRF0 32627738
    219 6sjj:W (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    220 6sjj:X (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    221 6sjj:X (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    222 6sjj:X (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    223 6sjj:X (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    224 6sjj:X (2.3) BS05 2AN ? GO:0004864 ... A0A160HRF0 32627738
    225 6sjj:Y (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    226 6sjj:Y (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    227 6sjj:Y (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    228 6sjj:Y (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    229 6sjj:Y (2.3) BS05 2AN ? GO:0004864 ... A0A160HRF0 32627738
    230 6sjj:Z (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    231 6sjj:Z (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    232 6sjj:Z (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    233 6sjj:Z (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    234 6sjj:Z (2.3) BS05 2AN ? GO:0004864 ... A0A160HRF0 32627738
    235 6sjj:a (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    236 6sjj:a (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    237 6sjj:a (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    238 6sjj:a (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    239 6sjj:a (2.3) BS05 2AN ? GO:0004864 ... A0A160HRF0 32627738
    240 6sjj:b (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    241 6sjj:b (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    242 6sjj:b (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    243 6sjj:b (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    244 6sjj:b (2.3) BS05 2AN ? GO:0004864 ... A0A160HRF0 32627738
    245 6sjj:b (2.3) BS06 2AN ? GO:0004864 ... A0A160HRF0 32627738
    246 6sjj:c (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    247 6sjj:c (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    248 6sjj:c (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    249 6sjj:c (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    250 6sjj:c (2.3) BS05 2AN ? GO:0004864 ... A0A160HRF0 32627738
    251 6sjj:d (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    252 6sjj:d (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    253 6sjj:d (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    254 6sjj:d (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    255 6sjj:e (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    256 6sjj:f (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    257 6sjj:f (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    258 6sjj:f (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    259 6sjj:f (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    260 6sjj:f (2.3) BS05 2AN ? GO:0004864 ... A0A160HRF0 32627738
    261 6sjj:g (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    262 6sjj:g (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    263 6sjj:g (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    264 6sjj:h (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    265 6sjj:h (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    266 6sjj:h (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    267 6sjj:h (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    268 6sjj:i (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    269 6sjj:j (2.3) BS01 2AN ? GO:0004864 ... A0A160HRF0 32627738
    270 6sjj:j (2.3) BS02 2AN ? GO:0004864 ... A0A160HRF0 32627738
    271 6sjj:j (2.3) BS03 2AN ? GO:0004864 ... A0A160HRF0 32627738
    272 6sjj:j (2.3) BS04 2AN ? GO:0004864 ... A0A160HRF0 32627738
    273 6sjj:j (2.3) BS05 2AN ? GO:0004864 ... A0A160HRF0 32627738
    274 6sjj:j (2.3) BS06 2AN ? GO:0004864 ... A0A160HRF0 32627738
    275 6v8m:A (1.75) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    276 6v8m:A (1.75) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    277 6v8m:A (1.75) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    278 6v8m:A (1.75) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    279 6v8m:A (1.75) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    280 6v8m:B (1.75) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    281 6v8m:B (1.75) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    282 6v8m:B (1.75) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    283 6v8m:B (1.75) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    284 6v8s:A (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    285 6v8s:A (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    286 6v8s:A (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    287 6v8s:A (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    288 6v8s:A (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    289 6v8s:A (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    290 6v8s:B (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    291 6v8s:B (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    292 6v8s:B (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    293 6v8s:B (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    294 6v8s:B (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    295 6v8s:C (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    296 6v8s:C (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    297 6v8s:C (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    298 6v8s:C (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    299 6v8s:C (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    300 6v8s:C (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    301 6v8s:C (2.1) BS07 2AN ? GO:0004864 ... B0YIU5 N/A
    302 6v8s:C (2.1) BS08 2AN ? GO:0004864 ... B0YIU5 N/A
    303 6v8s:C (2.1) BS09 2AN ? GO:0004864 ... B0YIU5 N/A
    304 6v8s:D (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    305 6v8s:D (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    306 6v8s:D (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    307 6v8s:D (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    308 6v8s:D (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    309 6v8s:D (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    310 6v8s:D (2.1) BS07 2AN ? GO:0004864 ... B0YIU5 N/A
    311 6v8s:E (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    312 6v8s:E (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    313 6v8s:E (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    314 6v8s:E (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    315 6v8s:E (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    316 6v8s:E (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    317 6v8s:F (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    318 6v8s:F (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    319 6v8s:F (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    320 6v8s:F (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    321 6v8s:F (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    322 6v8s:F (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    323 6v8s:F (2.1) BS07 2AN ? GO:0004864 ... B0YIU5 N/A
    324 6v8s:F (2.1) BS08 2AN ? GO:0004864 ... B0YIU5 N/A
    325 6v8s:F (2.1) BS09 2AN ? GO:0004864 ... B0YIU5 N/A
    326 6v8s:G (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    327 6v8s:G (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    328 6v8s:G (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    329 6v8s:G (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    330 6v8s:G (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    331 6v8s:G (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    332 6v8s:G (2.1) BS07 2AN ? GO:0004864 ... B0YIU5 N/A
    333 6v8s:H (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    334 6v8s:H (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    335 6v8s:H (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    336 6v8s:H (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    337 6v8s:H (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    338 6v8s:H (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    339 6v8s:H (2.1) BS07 2AN ? GO:0004864 ... B0YIU5 N/A
    340 6v8s:H (2.1) BS08 2AN ? GO:0004864 ... B0YIU5 N/A
    341 6v8s:H (2.1) BS09 2AN ? GO:0004864 ... B0YIU5 N/A
    342 6v8s:H (2.1) BS10 2AN ? GO:0004864 ... B0YIU5 N/A
    343 6v8s:I (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    344 6v8s:I (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    345 6v8s:I (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    346 6v8s:I (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    347 6v8s:I (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    348 6v8s:J (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    349 6v8s:J (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    350 6v8s:J (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    351 6v8s:J (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    352 6v8s:J (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    353 6v8s:J (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    354 6v8s:K (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    355 6v8s:K (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    356 6v8s:K (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    357 6v8s:K (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    358 6v8s:K (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    359 6v8s:K (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    360 6v8s:L (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    361 6v8s:L (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    362 6v8s:L (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    363 6v8s:L (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    364 6v8s:L (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    365 6v8s:M (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    366 6v8s:M (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    367 6v8s:M (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    368 6v8s:M (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    369 6v8s:M (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    370 6v8s:M (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    371 6v8s:M (2.1) BS07 2AN ? GO:0004864 ... B0YIU5 N/A
    372 6v8s:M (2.1) BS08 2AN ? GO:0004864 ... B0YIU5 N/A
    373 6v8s:N (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    374 6v8s:N (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    375 6v8s:N (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    376 6v8s:N (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    377 6v8s:N (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    378 6v8s:N (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    379 6v8s:O (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    380 6v8s:O (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    381 6v8s:O (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    382 6v8s:O (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    383 6v8s:O (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    384 6v8s:O (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    385 6v8s:P (2.1) BS01 2AN ? GO:0004864 ... B0YIU5 N/A
    386 6v8s:P (2.1) BS02 2AN ? GO:0004864 ... B0YIU5 N/A
    387 6v8s:P (2.1) BS03 2AN ? GO:0004864 ... B0YIU5 N/A
    388 6v8s:P (2.1) BS04 2AN ? GO:0004864 ... B0YIU5 N/A
    389 6v8s:P (2.1) BS05 2AN ? GO:0004864 ... B0YIU5 N/A
    390 6v8s:P (2.1) BS06 2AN ? GO:0004864 ... B0YIU5 N/A
    391 6v8s:P (2.1) BS07 2AN ? GO:0004864 ... B0YIU5 N/A
    392 6v8s:P (2.1) BS08 2AN ? GO:0004864 ... B0YIU5 N/A
    393 7fdx:A (0.95) BS01 2AN ? GO:0005515 ... P05413 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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