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BioLiP
Download all results in tab-seperated text for 128 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7o0u:AQ (2.35) BS04 0V9 N/A GO:0016020 ... N/A 35171663
    2 7o0u:H1 (2.35) BS01 0V9 ? GO:0016020 ... A0A143BJ28 35171663
    3 7o0u:af (2.35) BS01 0V9 ? GO:0005886 ... A0A143BHS7 35171663
    4 7o0u:ah (2.35) BS01 0V9 ? GO:0005886 ... A0A143BHS7 35171663
    5 7o0u:aj (2.35) BS01 0V9 ? GO:0005886 ... A0A143BHS7 35171663
    6 7o0u:ba (2.35) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    7 7o0u:bb (2.35) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    8 7o0u:bb (2.35) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    9 7o0u:bc (2.35) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    10 7o0u:bd (2.35) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    11 7o0u:bd (2.35) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    12 7o0u:be (2.35) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    13 7o0u:bf (2.35) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    14 7o0u:bf (2.35) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    15 7o0u:bg (2.35) BS01 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    16 7o0u:bh (2.35) BS01 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    17 7o0u:bh (2.35) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    18 7o0u:bi (2.35) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    19 7o0u:bj (2.35) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    20 7o0u:bj (2.35) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    21 7o0u:bk (2.35) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    22 7o0u:bl (2.35) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    23 7o0u:bl (2.35) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    24 7o0u:bm (2.35) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    25 7o0u:bn (2.35) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    26 7o0u:bn (2.35) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    27 7o0u:bo (2.35) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    28 7o0u:bo (2.35) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    29 7o0u:bp (2.35) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    30 7o0u:bp (2.35) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    31 7o0v:AQ (2.5) BS07 0V9 N/A GO:0016020 ... N/A 35171663
    32 7o0v:H1 (2.5) BS01 0V9 ? GO:0016020 ... A0A143BJ28 35171663
    33 7o0v:M (2.5) BS11 0V9 N/A GO:0009772 ... N/A 35171663
    34 7o0v:af (2.5) BS01 0V9 ? GO:0005886 ... A0A143BHS7 35171663
    35 7o0v:ah (2.5) BS01 0V9 ? GO:0005886 ... A0A143BHS7 35171663
    36 7o0v:ba (2.5) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    37 7o0v:ba (2.5) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    38 7o0v:bb (2.5) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    39 7o0v:bc (2.5) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    40 7o0v:bc (2.5) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    41 7o0v:bd (2.5) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    42 7o0v:be (2.5) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    43 7o0v:be (2.5) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    44 7o0v:bg (2.5) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    45 7o0v:bh (2.5) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    46 7o0v:bh (2.5) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    47 7o0v:bi (2.5) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    48 7o0v:bj (2.5) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    49 7o0v:bk (2.5) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    50 7o0v:bk (2.5) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    51 7o0v:bl (2.5) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    52 7o0v:bm (2.5) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    53 7o0v:bm (2.5) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    54 7o0v:bn (2.5) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    55 7o0v:bn (2.5) BS06 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    56 7o0v:bo (2.5) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    57 7o0v:bo (2.5) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    58 7o0w:AQ (2.47) BS04 0V9 N/A GO:0016020 ... N/A 35171663
    59 7o0w:H1 (2.47) BS02 0V9 ? GO:0016020 ... A0A143BJ28 35171663
    60 7o0w:L (2.47) BS06 0V9 ? GO:0009772 ... A0A143BHR2 35171663
    61 7o0w:af (2.47) BS01 0V9 ? GO:0005886 ... A0A143BHS7 35171663
    62 7o0w:ba (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    63 7o0w:bb (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    64 7o0w:bb (2.47) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    65 7o0w:bc (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    66 7o0w:bc (2.47) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    67 7o0w:bd (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    68 7o0w:bd (2.47) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    69 7o0w:be (2.47) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    70 7o0w:bf (2.47) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    71 7o0w:bf (2.47) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    72 7o0w:bg (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    73 7o0w:bg (2.47) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    74 7o0w:bh (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    75 7o0w:bh (2.47) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    76 7o0w:bi (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    77 7o0w:bj (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    78 7o0w:bj (2.47) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    79 7o0w:bk (2.47) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    80 7o0w:bl (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    81 7o0w:bl (2.47) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    82 7o0w:bm (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    83 7o0w:bm (2.47) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    84 7o0w:bn (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    85 7o0w:bn (2.47) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    86 7o0w:bo (2.47) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    87 7o0w:bp (2.47) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    88 7o0w:bp (2.47) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    89 7o0x:AQ (2.44) BS06 0V9 N/A GO:0016020 ... N/A 35171663
    90 7o0x:H1 (2.44) BS02 0V9 ? GO:0016020 ... A0A143BJ28 35171663
    91 7o0x:L (2.44) BS06 0V9 ? GO:0009772 ... A0A143BHR2 35171663
    92 7o0x:M (2.44) BS10 0V9 N/A GO:0009772 ... N/A 35171663
    93 7o0x:af (2.44) BS01 0V9 ? GO:0005886 ... A0A143BHS7 35171663
    94 7o0x:ah (2.44) BS01 0V9 ? GO:0005886 ... A0A143BHS7 35171663
    95 7o0x:aj (2.44) BS01 0V9 ? GO:0005886 ... A0A143BHS7 35171663
    96 7o0x:ba (2.44) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    97 7o0x:ba (2.44) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    98 7o0x:bb (2.44) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    99 7o0x:bc (2.44) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    100 7o0x:bc (2.44) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    101 7o0x:bd (2.44) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    102 7o0x:be (2.44) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    103 7o0x:be (2.44) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    104 7o0x:bf (2.44) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    105 7o0x:bg (2.44) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    106 7o0x:bh (2.44) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    107 7o0x:bh (2.44) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    108 7o0x:bi (2.44) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    109 7o0x:bi (2.44) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    110 7o0x:bj (2.44) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    111 7o0x:bk (2.44) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    112 7o0x:bk (2.44) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    113 7o0x:bl (2.44) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    114 7o0x:bl (2.44) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    115 7o0x:bm (2.44) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    116 7o0x:bm (2.44) BS04 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    117 7o0x:bn (2.44) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    118 7o0x:bn (2.44) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    119 7o0x:bo (2.44) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    120 7o0x:bo (2.44) BS05 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    121 7o0x:bp (2.44) BS02 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    122 7o0x:bp (2.44) BS03 0V9 ? GO:0005886 ... A0A143BHS8 35171663
    123 7xs6:A (2.9) BS01 0V9 2.4.1.16 GO:0000920 ... P08004 N/A
    124 7xs6:A (2.9) BS02 0V9 2.4.1.16 GO:0000920 ... P08004 N/A
    125 7xs6:B (2.9) BS02 0V9 2.4.1.16 GO:0000920 ... P08004 N/A
    126 7xs6:B (2.9) BS03 0V9 2.4.1.16 GO:0000920 ... P08004 N/A
    127 7xs7:A (3.2) BS01 0V9 2.4.1.16 GO:0000920 ... P08004 N/A
    128 7xs7:B (3.2) BS01 0V9 2.4.1.16 GO:0000920 ... P08004 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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