Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 169 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 1 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7eqd:0 (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    2 7eqd:0 (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    3 7eqd:0 (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    4 7eqd:1 (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    5 7eqd:1 (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    6 7eqd:2 (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    7 7eqd:2 (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    8 7eqd:2 (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    9 7eqd:3 (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    10 7eqd:3 (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    11 7eqd:4 (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    12 7eqd:4 (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    13 7eqd:4 (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    14 7eqd:5 (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    15 7eqd:5 (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    16 7eqd:6 (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    17 7eqd:6 (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    18 7eqd:6 (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    19 7eqd:7 (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    20 7eqd:7 (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    21 7eqd:8 (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    22 7eqd:8 (2.76) BS03 07D ? GO:0016020 ... Q2RQ23 34323477
    23 7eqd:9 (2.76) BS03 07D ? GO:0005886 ... P02947 34323477
    24 7eqd:9 (2.76) BS05 07D ? GO:0005886 ... P02947 34323477
    25 7eqd:A (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    26 7eqd:A (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    27 7eqd:B (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    28 7eqd:B (2.76) BS03 07D ? GO:0016020 ... Q2RQ23 34323477
    29 7eqd:D (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    30 7eqd:D (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    31 7eqd:E (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    32 7eqd:E (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    33 7eqd:E (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    34 7eqd:F (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    35 7eqd:F (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    36 7eqd:G (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    37 7eqd:G (2.76) BS03 07D ? GO:0016020 ... Q2RQ23 34323477
    38 7eqd:I (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    39 7eqd:I (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    40 7eqd:J (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    41 7eqd:J (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    42 7eqd:J (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    43 7eqd:K (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    44 7eqd:K (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    45 7eqd:L (2.76) BS01 07D ? GO:0009772 ... P10717 34323477
    46 7eqd:L (2.76) BS04 07D ? GO:0009772 ... P10717 34323477
    47 7eqd:L (2.76) BS07 07D ? GO:0009772 ... P10717 34323477
    48 7eqd:M (2.76) BS02 07D ? GO:0009772 ... Q2RQ26 34323477
    49 7eqd:M (2.76) BS04 07D ? GO:0009772 ... Q2RQ26 34323477
    50 7eqd:M (2.76) BS05 07D ? GO:0009772 ... Q2RQ26 34323477
    51 7eqd:N (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    52 7eqd:N (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    53 7eqd:N (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    54 7eqd:O (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    55 7eqd:O (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    56 7eqd:P (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    57 7eqd:P (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    58 7eqd:P (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    59 7eqd:Q (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    60 7eqd:Q (2.76) BS03 07D ? GO:0005886 ... P02947 34323477
    61 7eqd:R (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    62 7eqd:R (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    63 7eqd:S (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    64 7eqd:S (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    65 7eqd:T (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    66 7eqd:T (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    67 7eqd:T (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    68 7eqd:U (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    69 7eqd:U (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    70 7eqd:V (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    71 7eqd:V (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    72 7eqd:V (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    73 7eqd:W (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    74 7eqd:W (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    75 7eqd:X (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    76 7eqd:X (2.76) BS02 07D ? GO:0016020 ... Q2RQ23 34323477
    77 7eqd:X (2.76) BS04 07D ? GO:0016020 ... Q2RQ23 34323477
    78 7eqd:Y (2.76) BS02 07D ? GO:0005886 ... P02947 34323477
    79 7eqd:Y (2.76) BS04 07D ? GO:0005886 ... P02947 34323477
    80 7eqd:Z (2.76) BS01 07D ? GO:0016020 ... Q2RQ23 34323477
    81 7eqd:Z (2.76) BS03 07D ? GO:0016020 ... Q2RQ23 34323477
    82 7oy8:1 (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    83 7oy8:1 (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    84 7oy8:1 (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    85 7oy8:2 (2.5) BS01 07D ? GO:0016020 ... Q2RQ24 34402504
    86 7oy8:2 (2.5) BS03 07D ? GO:0016020 ... Q2RQ24 34402504
    87 7oy8:3 (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    88 7oy8:3 (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    89 7oy8:3 (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    90 7oy8:4 (2.5) BS02 07D ? GO:0016020 ... Q2RQ24 34402504
    91 7oy8:4 (2.5) BS04 07D ? GO:0016020 ... Q2RQ24 34402504
    92 7oy8:5 (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    93 7oy8:5 (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    94 7oy8:5 (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    95 7oy8:6 (2.5) BS01 07D ? GO:0016020 ... Q2RQ24 34402504
    96 7oy8:6 (2.5) BS02 07D ? GO:0016020 ... Q2RQ24 34402504
    97 7oy8:6 (2.5) BS04 07D ? GO:0016020 ... Q2RQ24 34402504
    98 7oy8:7 (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    99 7oy8:7 (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    100 7oy8:7 (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    101 7oy8:8 (2.5) BS01 07D ? GO:0016020 ... Q2RQ24 34402504
    102 7oy8:8 (2.5) BS03 07D ? GO:0016020 ... Q2RQ24 34402504
    103 7oy8:9 (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    104 7oy8:9 (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    105 7oy8:9 (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    106 7oy8:A (2.5) BS01 07D ? GO:0016020 ... Q2RQ24 34402504
    107 7oy8:A (2.5) BS04 07D ? GO:0016020 ... Q2RQ24 34402504
    108 7oy8:D (2.5) BS02 07D ? GO:0016020 ... Q2RQ24 34402504
    109 7oy8:D (2.5) BS04 07D ? GO:0016020 ... Q2RQ24 34402504
    110 7oy8:E (2.5) BS01 07D ? GO:0016020 ... Q2RQ24 34402504
    111 7oy8:E (2.5) BS04 07D ? GO:0016020 ... Q2RQ24 34402504
    112 7oy8:F (2.5) BS01 07D ? GO:0016020 ... Q2RQ24 34402504
    113 7oy8:F (2.5) BS04 07D ? GO:0016020 ... Q2RQ24 34402504
    114 7oy8:G (2.5) BS01 07D ? GO:0016020 ... Q2RQ24 34402504
    115 7oy8:G (2.5) BS02 07D ? GO:0016020 ... Q2RQ24 34402504
    116 7oy8:G (2.5) BS03 07D ? GO:0016020 ... Q2RQ24 34402504
    117 7oy8:G (2.5) BS07 07D ? GO:0016020 ... Q2RQ24 34402504
    118 7oy8:H (2.5) BS01 07D ? GO:0016020 ... Q2RWS4 34402504
    119 7oy8:I (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    120 7oy8:I (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    121 7oy8:I (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    122 7oy8:J (2.5) BS01 07D ? GO:0016020 ... Q2RQ24 34402504
    123 7oy8:J (2.5) BS05 07D ? GO:0016020 ... Q2RQ24 34402504
    124 7oy8:K (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    125 7oy8:K (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    126 7oy8:K (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    127 7oy8:L (2.5) BS04 07D ? GO:0009772 ... Q2RQ25 34402504
    128 7oy8:L (2.5) BS05 07D ? GO:0009772 ... Q2RQ25 34402504
    129 7oy8:L (2.5) BS10 07D ? GO:0009772 ... Q2RQ25 34402504
    130 7oy8:M (2.5) BS04 07D ? GO:0009772 ... Q2RQ26 34402504
    131 7oy8:M (2.5) BS08 07D ? GO:0009772 ... Q2RQ26 34402504
    132 7oy8:M (2.5) BS09 07D ? GO:0009772 ... Q2RQ26 34402504
    133 7oy8:N (2.5) BS03 07D ? GO:0016020 ... Q2RQ24 34402504
    134 7oy8:N (2.5) BS04 07D ? GO:0016020 ... Q2RQ24 34402504
    135 7oy8:O (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    136 7oy8:O (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    137 7oy8:O (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    138 7oy8:Q (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    139 7oy8:Q (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    140 7oy8:R (2.5) BS03 07D ? GO:0005886 ... Q2RQ24 34402504
    141 7oy8:R (2.5) BS05 07D ? GO:0005886 ... Q2RQ24 34402504
    142 7oy8:S (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    143 7oy8:S (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    144 7oy8:S (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    145 7oy8:T (2.5) BS01 07D ? GO:0016020 ... Q2RQ24 34402504
    146 7oy8:T (2.5) BS04 07D ? GO:0016020 ... Q2RQ24 34402504
    147 7oy8:U (2.5) BS02 07D ? GO:0016020 ... Q2RQ23 34402504
    148 7oy8:U (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    149 7oy8:U (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    150 7oy8:V (2.5) BS01 07D ? GO:0016020 ... Q2RQ24 34402504
    151 7oy8:V (2.5) BS04 07D ? GO:0016020 ... Q2RQ24 34402504
    152 7oy8:W (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    153 7oy8:W (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    154 7oy8:W (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    155 7oy8:X (2.5) BS02 07D ? GO:0016020 ... Q2RQ24 34402504
    156 7oy8:X (2.5) BS04 07D ? GO:0016020 ... Q2RQ24 34402504
    157 7oy8:Y (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    158 7oy8:Y (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    159 7oy8:Y (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    160 7oy8:Z (2.5) BS01 07D ? GO:0016020 ... Q2RQ24 34402504
    161 7oy8:Z (2.5) BS04 07D ? GO:0016020 ... Q2RQ24 34402504
    162 7oy8:d (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    163 7oy8:d (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    164 7oy8:d (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    165 7oy8:m (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    166 7oy8:m (2.5) BS03 07D ? GO:0016020 ... Q2RQ23 34402504
    167 7oy8:n (2.5) BS01 07D ? GO:0016020 ... Q2RQ23 34402504
    168 7oy8:n (2.5) BS02 07D ? GO:0016020 ... Q2RQ23 34402504
    169 7oy8:n (2.5) BS04 07D ? GO:0016020 ... Q2RQ23 34402504
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218