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BioLiP
Download all results in tab-seperated text for 713946 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    35801 1qi4:A (2.0) BS02 GLC 3.2.1.60 GO:0004556 ... P13507 10556241
    35802 1qi4:A (2.0) BS03 GLC 3.2.1.60 GO:0004556 ... P13507 10556241
    35803 1qi4:A (2.0) BS04 GLC 3.2.1.60 GO:0004556 ... P13507 10556241
    35804 1qi4:A (2.0) BS05 CA 3.2.1.60 GO:0004556 ... P13507 10556241
    35805 1qi4:A (2.0) BS06 CA 3.2.1.60 GO:0004556 ... P13507 10556241
    35806 1qi5:A (2.0) BS01 GLC 3.2.1.60 GO:0005975 ... P13507 10556241
    35807 1qi5:A (2.0) BS02 GLC 3.2.1.60 GO:0005975 ... P13507 10556241
    35808 1qi5:A (2.0) BS03 GLC 3.2.1.60 GO:0005975 ... P13507 10556241
    35809 1qi5:A (2.0) BS04 GLC 3.2.1.60 GO:0005975 ... P13507 10556241
    35810 1qi5:A (2.0) BS05 CA 3.2.1.60 GO:0005975 ... P13507 10556241
    35811 1qi5:A (2.0) BS06 CA 3.2.1.60 GO:0005975 ... P13507 10556241
    35812 1qi8:A (1.8) BS01 HEM ? GO:0004601 ... P69905 10390349
    35813 1qi8:B (1.8) BS01 HEM ? GO:0004601 ... P68871 10390349
    35814 1qi8:C (1.8) BS01 HEM ? GO:0004601 ... P69905 10390349
    35815 1qi8:D (1.8) BS01 HEM ? GO:0004601 ... P68871 10390349
    35816 1qia:A (2.0) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35817 1qia:A (2.0) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35818 1qia:A (2.0) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35819 1qia:A (2.0) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35820 1qia:A (2.0) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35821 1qia:B (2.0) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35822 1qia:B (2.0) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35823 1qia:B (2.0) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35824 1qia:B (2.0) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35825 1qia:B (2.0) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35826 1qia:C (2.0) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35827 1qia:C (2.0) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35828 1qia:C (2.0) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35829 1qia:C (2.0) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35830 1qia:C (2.0) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35831 1qia:D (2.0) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35832 1qia:D (2.0) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35833 1qia:D (2.0) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35834 1qia:D (2.0) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35835 1qia:D (2.0) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35836 1qib:A (2.8) BS01 ZN 3.4.24.24 GO:0004222 ... P08253 N/A
    35837 1qib:A (2.8) BS02 ZN 3.4.24.24 GO:0004222 ... P08253 N/A
    35838 1qib:A (2.8) BS03 CA 3.4.24.24 GO:0004222 ... P08253 N/A
    35839 1qib:A (2.8) BS04 CA 3.4.24.24 GO:0004222 ... P08253 N/A
    35840 1qib:A (2.8) BS05 CA 3.4.24.24 GO:0004222 ... P08253 N/A
    35841 1qic:A (2.0) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35842 1qic:A (2.0) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35843 1qic:A (2.0) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35844 1qic:A (2.0) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35845 1qic:A (2.0) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35846 1qic:B (2.0) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35847 1qic:B (2.0) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35848 1qic:B (2.0) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35849 1qic:B (2.0) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35850 1qic:B (2.0) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35851 1qic:C (2.0) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35852 1qic:C (2.0) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35853 1qic:C (2.0) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35854 1qic:C (2.0) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35855 1qic:C (2.0) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35856 1qic:D (2.0) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35857 1qic:D (2.0) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10422833
    35858 1qic:D (2.0) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35859 1qic:D (2.0) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35860 1qic:D (2.0) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10422833
    35861 1qin:A (2.0) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 10521255
    35862 1qin:A (2.0) BS02 GIP 4.4.1.5 GO:0004462 ... Q04760 10521255 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    35863 1qin:A (2.0) BS03 GIP 4.4.1.5 GO:0004462 ... Q04760 10521255 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    35864 1qin:B (2.0) BS01 GIP 4.4.1.5 GO:0004462 ... Q04760 10521255 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    35865 1qin:B (2.0) BS02 ZN 4.4.1.5 GO:0004462 ... Q04760 10521255
    35866 1qin:B (2.0) BS03 GIP 4.4.1.5 GO:0004462 ... Q04760 10521255 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    35867 1qip:A (1.72) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 10521255
    35868 1qip:A (1.72) BS02 GNB 4.4.1.5 GO:0004462 ... Q04760 10521255
    35869 1qip:A (1.72) BS03 ZN 4.4.1.5 GO:0004462 ... Q04760 10521255
    35870 1qip:A (1.72) BS04 GNB 4.4.1.5 GO:0004462 ... Q04760 10521255
    35871 1qip:B (1.72) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 10521255
    35872 1qip:B (1.72) BS02 GNB 4.4.1.5 GO:0004462 ... Q04760 10521255
    35873 1qip:B (1.72) BS03 ZN 4.4.1.5 GO:0004462 ... Q04760 10521255
    35874 1qip:B (1.72) BS04 GNB 4.4.1.5 GO:0004462 ... Q04760 10521255
    35875 1qip:C (1.72) BS01 ZN 4.4.1.5 GO:0004462 ... Q04760 10521255
    35876 1qip:C (1.72) BS02 GNB 4.4.1.5 GO:0004462 ... Q04760 10521255
    35877 1qip:C (1.72) BS03 ZN 4.4.1.5 GO:0004462 ... Q04760 10521255
    35878 1qip:C (1.72) BS04 GNB 4.4.1.5 GO:0004462 ... Q04760 10521255
    35879 1qip:D (1.72) BS01 GNB 4.4.1.5 GO:0004462 ... Q04760 10521255
    35880 1qip:D (1.72) BS02 ZN 4.4.1.5 GO:0004462 ... Q04760 10521255
    35881 1qip:D (1.72) BS03 GNB 4.4.1.5 GO:0004462 ... Q04760 10521255
    35882 1qip:D (1.72) BS04 ZN 4.4.1.5 GO:0004462 ... Q04760 10521255
    35883 1qip:D (1.72) BS05 GNB 4.4.1.5 GO:0004462 ... Q04760 10521255
    35884 1qiq:A (1.5) BS01 ACC 1.21.3.1 GO:0005506 ... P05326 10537113
    35885 1qiq:A (1.5) BS02 FE 1.21.3.1 GO:0005506 ... P05326 10537113
    35886 1qir:A (2.2) BS01 PLP 2.6.1.1 GO:0003824 ... P00509 10708649
    35887 1qis:A (1.9) BS01 PLP 2.6.1.1 GO:0003824 ... P00509 10708649
    35888 1qit:A (1.9) BS01 PLP 2.6.1.1 GO:0003824 ... P00509 10708649
    35889 1qiv:A (2.64) BS01 CA ? GO:0000922 ... P62157 10731425
    35890 1qiv:A (2.64) BS02 CA ? GO:0000922 ... P62157 10731425
    35891 1qiv:A (2.64) BS03 CA ? GO:0000922 ... P62157 10731425
    35892 1qiv:A (2.64) BS04 CA ? GO:0000922 ... P62157 10731425
    35893 1qiv:A (2.64) BS05 DPD ? GO:0000922 ... P62157 10731425
    35894 1qiv:A (2.64) BS06 DPD ? GO:0000922 ... P62157 10731425
    35895 1qiw:A (2.3) BS01 CA ? GO:0000922 ... P62157 10731425
    35896 1qiw:A (2.3) BS02 CA ? GO:0000922 ... P62157 10731425
    35897 1qiw:A (2.3) BS03 CA ? GO:0000922 ... P62157 10731425
    35898 1qiw:A (2.3) BS04 CA ? GO:0000922 ... P62157 10731425
    35899 1qiw:A (2.3) BS05 DPD ? GO:0000922 ... P62157 10731425 MOAD: Kd=18nM
    35900 1qiw:A (2.3) BS06 DPD ? GO:0000922 ... P62157 10731425 MOAD: Kd=18nM
    35901 1qiw:B (2.3) BS01 CA ? GO:0000922 ... P62157 10731425
    35902 1qiw:B (2.3) BS02 CA ? GO:0000922 ... P62157 10731425
    35903 1qiw:B (2.3) BS03 CA ? GO:0000922 ... P62157 10731425
    35904 1qiw:B (2.3) BS04 CA ? GO:0000922 ... P62157 10731425
    35905 1qiw:B (2.3) BS05 DPD ? GO:0000922 ... P62157 10731425 MOAD: Kd=18nM
    35906 1qix:B (1.9) BS01 peptide 3.4.21.36 GO:0004252 ... P00772 9187653
    35907 1qix:B (1.9) BS02 CA 3.4.21.36 GO:0004252 ... P00772 9187653
    35908 1qj1:B (2.0) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10387040
    35909 1qj1:B (2.0) BS02 166 3.4.21.5 GO:0004252 ... P00734 10387040
    35910 1qj3:A (2.7) BS01 PLP 2.6.1.62 GO:0003824 ... P12995 10452893
    35911 1qj3:A (2.7) BS02 KAP 2.6.1.62 GO:0003824 ... P12995 10452893
    35912 1qj3:B (2.7) BS01 PLP 2.6.1.62 GO:0003824 ... P12995 10452893
    35913 1qj3:B (2.7) BS02 KAP 2.6.1.62 GO:0003824 ... P12995 10452893
    35914 1qj5:A (1.8) BS01 PLP 2.6.1.62 GO:0003824 ... P12995 10452893
    35915 1qj5:B (1.8) BS01 PLP 2.6.1.62 GO:0003824 ... P12995 10452893
    35916 1qj6:B (2.2) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10387040
    35917 1qj6:B (2.2) BS02 167 3.4.21.5 GO:0004252 ... P00734 10387040
    35918 1qj7:B (2.2) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10387040
    35919 1qj7:B (2.2) BS02 GR1 3.4.21.5 GO:0004252 ... P00734 10387040 PDBbind: -logKd/Ki=8.10, IC50=8nM
    35920 1qja:A (2.0) BS01 peptide ? GO:0000122 ... P63104 10488331
    35921 1qja:B (2.0) BS01 peptide ? GO:0000122 ... P63104 10488331
    35922 1qjb:A (2.0) BS01 peptide ? GO:0000122 ... P63104 10488331
    35923 1qjb:B (2.0) BS01 peptide ? GO:0000122 ... P63104 10488331
    35924 1qjc:B (1.63) BS01 PNS 2.7.7.3 GO:0003824 ... P0A6I6 11812124
    35925 1qjd:A (1.8) BS01 HEC 1.3.2.4 GO:0008202 ... Q07WU7 10581550
    35926 1qjd:A (1.8) BS02 HEC 1.3.2.4 GO:0008202 ... Q07WU7 10581550
    35927 1qjd:A (1.8) BS03 HEC 1.3.2.4 GO:0008202 ... Q07WU7 10581550
    35928 1qjd:A (1.8) BS04 HEC 1.3.2.4 GO:0008202 ... Q07WU7 10581550
    35929 1qjd:A (1.8) BS05 FAD 1.3.2.4 GO:0008202 ... Q07WU7 10581550
    35930 1qjd:A (1.8) BS06 TEO 1.3.2.4 GO:0008202 ... Q07WU7 10581550
    35931 1qje:A (1.35) BS01 IP1 1.21.3.1 GO:0005506 ... P05326 10537113
    35932 1qje:A (1.35) BS02 ACV 1.21.3.1 GO:0005506 ... P05326 10537113
    35933 1qje:A (1.35) BS03 FE2 1.21.3.1 GO:0005506 ... P05326 10537113
    35934 1qjf:A (1.4) BS01 ACS 1.21.3.1 GO:0005506 ... P05326 10537113
    35935 1qjf:A (1.4) BS02 FE2 1.21.3.1 GO:0005506 ... P05326 10537113
    35936 1qjg:A (2.3) BS01 EQU 5.3.3.1 GO:0004769 ... P00947 10551849
    35937 1qjg:B (2.3) BS01 EQU 5.3.3.1 GO:0004769 ... P00947 10551849
    35938 1qjg:C (2.3) BS01 EQU 5.3.3.1 GO:0004769 ... P00947 10551849
    35939 1qjg:D (2.3) BS01 EQU 5.3.3.1 GO:0004769 ... P00947 10551849
    35940 1qjg:E (2.3) BS01 EQU 5.3.3.1 GO:0004769 ... P00947 10551849
    35941 1qjg:F (2.3) BS01 EQU 5.3.3.1 GO:0004769 ... P00947 10551849
    35942 1qji:A (2.14) BS01 ZN 3.4.24.21 GO:0004222 ... P07584 8756323
    35943 1qji:A (2.14) BS02 PKF 3.4.24.21 GO:0004222 ... P07584 8756323 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    35944 1qjj:A (1.86) BS01 peptide 3.4.24.21 GO:0004222 ... P07584 8756323
    35945 1qjj:A (1.86) BS02 ZN 3.4.24.21 GO:0004222 ... P07584 8756323
    35946 1qjm:A (3.4) BS01 SM 3.4.21.- GO:0001503 ... O77811 10531475
    35947 1qjm:A (3.4) BS02 SM 3.4.21.- GO:0001503 ... O77811 10531475
    35948 1qjm:A (3.4) BS03 CO3 3.4.21.- GO:0001503 ... O77811 10531475
    35949 1qjm:A (3.4) BS04 CO3 3.4.21.- GO:0001503 ... O77811 10531475
    35950 1qjq:A (2.95) BS01 PFC ? GO:0009279 ... P06971 10850805
    35951 1qjs:A (2.9) BS01 HEM ? GO:0006879 ... P20058 10504726
    35952 1qjs:B (2.9) BS01 HEM ? GO:0006879 ... P20058 10504726
    35953 1qjw:A (1.9) BS01 MGL 3.2.1.91 GO:0004553 ... P07987 10508787
    35954 1qjw:A (1.9) BS02 SGC 3.2.1.91 GO:0004553 ... P07987 10508787
    35955 1qjw:A (1.9) BS03 GLC 3.2.1.91 GO:0004553 ... P07987 10508787
    35956 1qjw:A (1.9) BS04 GLC 3.2.1.91 GO:0004553 ... P07987 10508787
    35957 1qjw:A (1.9) BS05 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35958 1qjw:A (1.9) BS06 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35959 1qjw:A (1.9) BS07 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35960 1qjw:A (1.9) BS08 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35961 1qjw:A (1.9) BS09 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35962 1qjw:B (1.9) BS01 MGL 3.2.1.91 GO:0004553 ... P07987 10508787
    35963 1qjw:B (1.9) BS02 SGC 3.2.1.91 GO:0004553 ... P07987 10508787
    35964 1qjw:B (1.9) BS03 GLC 3.2.1.91 GO:0004553 ... P07987 10508787
    35965 1qjw:B (1.9) BS04 GLC 3.2.1.91 GO:0004553 ... P07987 10508787
    35966 1qjw:B (1.9) BS05 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35967 1qjw:B (1.9) BS06 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35968 1qjw:B (1.9) BS07 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35969 1qjw:B (1.9) BS08 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35970 1qjw:B (1.9) BS09 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35971 1qjw:B (1.9) BS10 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35972 1qk0:A (2.1) BS01 XYP 3.2.1.91 GO:0004553 ... P07987 10508787
    35973 1qk0:A (2.1) BS02 BGC 3.2.1.91 GO:0004553 ... P07987 10508787
    35974 1qk0:A (2.1) BS03 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35975 1qk0:A (2.1) BS04 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35976 1qk0:A (2.1) BS05 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35977 1qk0:A (2.1) BS06 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35978 1qk0:A (2.1) BS07 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35979 1qk0:A (2.1) BS08 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35980 1qk0:A (2.1) BS09 IOB 3.2.1.91 GO:0004553 ... P07987 10508787
    35981 1qk0:B (2.1) BS01 XYS 3.2.1.91 GO:0004553 ... P07987 10508787
    35982 1qk0:B (2.1) BS02 GLC 3.2.1.91 GO:0004553 ... P07987 10508787
    35983 1qk0:B (2.1) BS03 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35984 1qk0:B (2.1) BS04 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35985 1qk0:B (2.1) BS05 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35986 1qk0:B (2.1) BS06 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35987 1qk0:B (2.1) BS07 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35988 1qk0:B (2.1) BS08 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35989 1qk0:B (2.1) BS09 IOB 3.2.1.91 GO:0004553 ... P07987 10508787
    35990 1qk2:A (2.0) BS01 MGL 3.2.1.91 GO:0004553 ... P07987 10508787
    35991 1qk2:A (2.0) BS02 SGC 3.2.1.91 GO:0004553 ... P07987 10508787
    35992 1qk2:A (2.0) BS03 GLC 3.2.1.91 GO:0004553 ... P07987 10508787
    35993 1qk2:A (2.0) BS04 GLC 3.2.1.91 GO:0004553 ... P07987 10508787
    35994 1qk2:A (2.0) BS05 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35995 1qk2:A (2.0) BS06 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35996 1qk2:A (2.0) BS07 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35997 1qk2:A (2.0) BS08 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35998 1qk2:A (2.0) BS09 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    35999 1qk2:A (2.0) BS10 MAN 3.2.1.91 GO:0004553 ... P07987 10508787
    36000 1qk2:B (2.0) BS01 MGL 3.2.1.91 GO:0004553 ... P07987 10508787

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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