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BioLiP
Download all results in tab-seperated text for 594392 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    580601 8tpo:A (3.59) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    580602 8tpo:B (3.59) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    580603 8tpo:B (3.59) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    580604 8tpo:B (3.59) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    580605 8tpp:A (3.64) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    580606 8tpp:A (3.64) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    580607 8tpp:B (3.64) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    580608 8tpp:B (3.64) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    580609 8tpq:A (3.35) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    580610 8tpq:A (3.35) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    580611 8tpq:A (3.35) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    580612 8tpq:B (3.35) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    580613 8tpq:B (3.35) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    580614 8tpq:B (3.35) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    580615 8tpr:A (2.85) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    580616 8tpr:A (2.85) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    580617 8tpr:A (2.85) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    580618 8tpr:A (2.85) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    580619 8tpr:B (2.85) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    580620 8tpr:B (2.85) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    580621 8tpr:B (2.85) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    580622 8tpr:B (2.85) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    580623 8tps:A (2.97) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    580624 8tps:A (2.97) BS02 PGW ? GO:0005254 ... C7Z7K1 38684930
    580625 8tps:A (2.97) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    580626 8tps:A (2.97) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    580627 8tps:B (2.97) BS01 PGW ? GO:0005254 ... C7Z7K1 38684930
    580628 8tps:B (2.97) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    580629 8tps:B (2.97) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    580630 8tps:B (2.97) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    580631 8tpt:A (3.01) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    580632 8tpt:A (3.01) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    580633 8tpt:A (3.01) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    580634 8tpt:A (3.01) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    580635 8tpt:B (3.01) BS01 CA ? GO:0005254 ... C7Z7K1 38684930
    580636 8tpt:B (3.01) BS02 CA ? GO:0005254 ... C7Z7K1 38684930
    580637 8tpt:B (3.01) BS03 PGW ? GO:0005254 ... C7Z7K1 38684930
    580638 8tpt:B (3.01) BS04 PGW ? GO:0005254 ... C7Z7K1 38684930
    580639 8tpv:A (2.27) BS01 JEI 2.4.2.8 GO:0000166 ... P00492 38651522
    580640 8tpv:A (2.27) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    580641 8tpv:B (2.27) BS01 JEI 2.4.2.8 GO:0000166 ... P00492 38651522
    580642 8tpv:B (2.27) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    580643 8tpv:C (2.27) BS01 JEI 2.4.2.8 GO:0000166 ... P00492 38651522
    580644 8tpv:C (2.27) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    580645 8tpv:D (2.27) BS01 JEI 2.4.2.8 GO:0000166 ... P00492 38651522
    580646 8tpv:D (2.27) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    580647 8tpy:A (2.5) BS01 JG6 2.4.2.8 GO:0000166 ... P00492 38651522
    580648 8tpy:A (2.5) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    580649 8tpy:B (2.5) BS01 JG6 2.4.2.8 GO:0000166 ... P00492 38651522
    580650 8tpy:B (2.5) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    580651 8tpy:C (2.5) BS01 JG6 2.4.2.8 GO:0000166 ... P00492 38651522
    580652 8tpy:C (2.5) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    580653 8tpy:D (2.5) BS01 JG6 2.4.2.8 GO:0000166 ... P00492 38651522
    580654 8tpy:D (2.5) BS02 MG 2.4.2.8 GO:0000166 ... P00492 38651522
    580655 8tqd:A (2.02) BS01 JMR ? GO:0003677 ... P19838 38653237
    580656 8tqm:A (3.2) BS01 Y01 2.3.2.27 GO:0000837 ... P40318 38467638
    580657 8tqm:A (3.2) BS02 ERG 2.3.2.27 GO:0000837 ... P40318 38467638
    580658 8tr1:A (2.46) BS01 JEI 2.4.2.8 GO:0000166 ... Q07010 38651522
    580659 8tr1:B (2.46) BS01 JEI 2.4.2.8 GO:0000166 ... Q07010 38651522
    580660 8tr1:C (2.46) BS01 JEI 2.4.2.8 GO:0000166 ... Q07010 38651522
    580661 8tr1:D (2.46) BS01 JEI 2.4.2.8 GO:0000166 ... Q07010 38651522
    580662 8tr9:A (3.2) BS01 GDP N/A GO:0000785 ... P21980 N/A
    580663 8trg:A (2.93) BS01 dna ? GO:0000725 ... P0A7G6 38755298
    580664 8trg:A (2.93) BS02 AGS ? GO:0000725 ... P0A7G6 38755298
    580665 8trg:A (2.93) BS03 AGS ? GO:0000725 ... P0A7G6 38755298
    580666 8trg:B (2.93) BS01 dna ? GO:0000725 ... P0A7G6 38755298
    580667 8trg:B (2.93) BS02 AGS ? GO:0000725 ... P0A7G6 38755298
    580668 8trg:B (2.93) BS03 AGS ? GO:0000725 ... P0A7G6 38755298
    580669 8trg:C (2.93) BS01 dna ? GO:0000725 ... P0A7G6 38755298
    580670 8trg:C (2.93) BS02 AGS ? GO:0000725 ... P0A7G6 38755298
    580671 8trg:C (2.93) BS03 AGS ? GO:0000725 ... P0A7G6 38755298
    580672 8trg:D (2.93) BS01 dna ? GO:0000725 ... P0A7G6 38755298
    580673 8trg:D (2.93) BS02 AGS ? GO:0000725 ... P0A7G6 38755298
    580674 8trg:D (2.93) BS03 AGS ? GO:0000725 ... P0A7G6 38755298
    580675 8trg:E (2.93) BS01 dna ? GO:0000725 ... P0A7G6 38755298
    580676 8trg:E (2.93) BS02 AGS ? GO:0000725 ... P0A7G6 38755298
    580677 8trg:E (2.93) BS03 AGS ? GO:0000725 ... P0A7G6 38755298
    580678 8trg:F (2.93) BS01 dna ? GO:0000725 ... P0A7G6 38755298
    580679 8trg:F (2.93) BS02 AGS ? GO:0000725 ... P0A7G6 38755298
    580680 8trg:F (2.93) BS03 AGS ? GO:0000725 ... P0A7G6 38755298
    580681 8trg:G (2.93) BS01 dna ? GO:0000725 ... P0A7G6 38755298
    580682 8trg:G (2.93) BS02 AGS ? GO:0000725 ... P0A7G6 38755298
    580683 8trg:G (2.93) BS03 AGS ? GO:0000725 ... P0A7G6 38755298
    580684 8trg:H (2.93) BS01 dna ? GO:0000725 ... P0A7G6 38755298
    580685 8trg:H (2.93) BS02 AGS ? GO:0000725 ... P0A7G6 38755298
    580686 8trm:A (2.5) BS01 ADP 3.6.4.- GO:0005524 ... P53476 38418447
    580687 8trm:B (2.5) BS01 ADP 3.6.4.- GO:0005524 ... P53476 38418447
    580688 8trm:C (2.5) BS01 ADP 3.6.4.- GO:0005524 ... P53476 38418447
    580689 8trn:A (3.0) BS01 ADP 3.6.4.- GO:0005524 ... P53476 38418447
    580690 8trn:A (3.0) BS02 9UE 3.6.4.- GO:0005524 ... P53476 38418447
    580691 8trn:A (3.0) BS03 9UE 3.6.4.- GO:0005524 ... P53476 38418447
    580692 8trn:B (3.0) BS01 9UE 3.6.4.- GO:0005524 ... P53476 38418447
    580693 8trn:B (3.0) BS02 ADP 3.6.4.- GO:0005524 ... P53476 38418447
    580694 8trn:B (3.0) BS03 9UE 3.6.4.- GO:0005524 ... P53476 38418447
    580695 8trn:C (3.0) BS01 ADP 3.6.4.- GO:0005524 ... P53476 38418447
    580696 8trn:C (3.0) BS02 9UE 3.6.4.- GO:0005524 ... P53476 38418447
    580697 8ts4:A (2.2) BS01 KFF 2.4.2.8 GO:0000166 ... Q07010 38651522
    580698 8ts4:B (2.2) BS01 KFF 2.4.2.8 GO:0000166 ... Q07010 38651522
    580699 8ts9:A (2.83) BS01 UE9 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 37916956
    580700 8tsa:A (2.51) BS01 UIW 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 37916956
    580701 8tsb:A (3.53) BS01 UIW 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 37916956
    580702 8tsc:A (3.62) BS01 UJC 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 37916956
    580703 8tsd:A (2.7) BS01 XUZ 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 37916956
    580704 8tsh:A (3.1) BS01 ATP ? GO:0005524 ... A0A2S5T4B3 38570679
    580705 8tsh:A (3.1) BS02 ATP ? GO:0005524 ... A0A2S5T4B3 38570679
    580706 8tsh:B (3.1) BS01 ATP ? GO:0005524 ... A0A2S5T4B3 38570679
    580707 8tsh:B (3.1) BS02 ATP ? GO:0005524 ... A0A2S5T4B3 38570679
    580708 8tsi:A (4.4) BS01 ADP ? GO:0005524 ... A0A2S5T4B3 38570679
    580709 8tsi:A (4.4) BS02 ALF ? GO:0005524 ... A0A2S5T4B3 38570679
    580710 8tsi:A (4.4) BS03 ALF ? GO:0005524 ... A0A2S5T4B3 38570679
    580711 8tsi:A (4.4) BS04 ADP ? GO:0005524 ... A0A2S5T4B3 38570679
    580712 8tsi:B (4.4) BS01 ADP ? GO:0005524 ... A0A2S5T4B3 38570679
    580713 8tsi:B (4.4) BS02 ALF ? GO:0005524 ... A0A2S5T4B3 38570679
    580714 8tsi:B (4.4) BS03 ALF ? GO:0005524 ... A0A2S5T4B3 38570679
    580715 8tsi:B (4.4) BS04 ADP ? GO:0005524 ... A0A2S5T4B3 38570679
    580716 8tso:A (2.68) BS01 KDL N/A GO:0005524 ... P60752 N/A
    580717 8tso:A (2.68) BS02 KDL N/A GO:0005524 ... P60752 N/A
    580718 8tso:B (2.68) BS01 KDL N/A GO:0005524 ... P60752 N/A
    580719 8tso:B (2.68) BS02 KDL N/A GO:0005524 ... P60752 N/A
    580720 8tt3:C (3.4) BS01 KJ9 ? GO:0005886 ... A0A2S5T447 38570679
    580721 8tt3:D (3.4) BS01 KJ9 ? GO:0005886 ... A0A2S5T447 38570679
    580722 8ttb:C (2.77) BS01 FE 3.1.3.16 GO:0000159 ... P67775 38123684
    580723 8ttb:C (2.77) BS02 ZN 3.1.3.16 GO:0000159 ... P67775 38123684
    580724 8tte:A (3.26) BS01 peptide ? GO:0005886 ... P0A0J7 38802368
    580725 8ttg:A (3.35) BS01 peptide ? GO:0005886 ... P0A0J7 38802368
    580726 8ttp:A (1.43) BS01 NXL 3.5.2.6 GO:0008800 ... A0A377KDY3 N/A
    580727 8ttp:B (1.43) BS01 NXL 3.5.2.6 GO:0008800 ... A0A377KDY3 N/A
    580728 8ttw:A (2.96) BS01 83J ? GO:0019031 ... Q2N0S6 37872202
    580729 8ttw:E (2.96) BS01 MAN ? GO:0019031 ... Q2N0S6 37872202
    580730 8ttw:E (2.96) BS02 83J ? GO:0019031 ... Q2N0S6 37872202
    580731 8ttw:I (2.96) BS01 MAN ? GO:0019031 ... Q2N0S6 37872202
    580732 8ttw:I (2.96) BS02 83J ? GO:0019031 ... Q2N0S6 37872202
    580733 8tty:A (2.101) BS01 QEC ? GO:0002224 ... B3Y653 38352830
    580734 8tty:A (2.101) BS02 QEC ? GO:0002224 ... B3Y653 38352830
    580735 8tty:B (2.101) BS01 QEC ? GO:0002224 ... B3Y653 38352830
    580736 8tty:B (2.101) BS02 QEC ? GO:0002224 ... B3Y653 38352830
    580737 8ttz:A (3.14) BS01 QCX ? GO:0002224 ... B3Y653 38352830
    580738 8ttz:A (3.14) BS02 QCX ? GO:0002224 ... B3Y653 38352830
    580739 8ttz:B (3.14) BS01 QCX ? GO:0002224 ... B3Y653 38352830
    580740 8ttz:B (3.14) BS02 QCX ? GO:0002224 ... B3Y653 38352830
    580741 8tu9:A (3.26) BS01 ACO 2.3.1.78 GO:0003674 ... P42212
    Q68CP4    		 39196614
    580742 8tu9:B (3.26) BS01 ACO 2.3.1.78 GO:0003674 ... P42212
    Q68CP4    		 39196614
    580743 8tua:A (4.1) BS01 4IP ? GO:0005085 ... Q8TCU6 N/A
    580744 8tug:A (3.5) BS01 dna 2.7.7.6 GO:0000428 ... P04050 38194460
    580745 8tug:A (3.5) BS02 dna 2.7.7.6 GO:0000428 ... P04050 38194460
    580746 8tug:A (3.5) BS03 rna 2.7.7.6 GO:0000428 ... P04050 38194460
    580747 8tug:A (3.5) BS04 ZN 2.7.7.6 GO:0000428 ... P04050 38194460
    580748 8tug:A (3.5) BS05 ZN 2.7.7.6 GO:0000428 ... P04050 38194460
    580749 8tug:A (3.5) BS06 MG 2.7.7.6 GO:0000428 ... P04050 38194460
    580750 8tug:B (3.5) BS01 dna 2.7.7.6 GO:0000428 ... P08518 38194460
    580751 8tug:B (3.5) BS02 dna 2.7.7.6 GO:0000428 ... P08518 38194460
    580752 8tug:B (3.5) BS03 rna 2.7.7.6 GO:0000428 ... P08518 38194460
    580753 8tug:B (3.5) BS04 ZN 2.7.7.6 GO:0000428 ... P08518 38194460
    580754 8tug:C (3.5) BS01 ZN ? GO:0000428 ... P16370 38194460
    580755 8tug:E (3.5) BS01 dna ? GO:0000428 ... P20434 38194460
    580756 8tug:I (3.5) BS01 ZN ? GO:0000428 ... P27999 38194460
    580757 8tug:I (3.5) BS02 ZN ? GO:0000428 ... P27999 38194460
    580758 8tug:J (3.5) BS01 ZN ? GO:0000428 ... P22139 38194460
    580759 8tug:L (3.5) BS01 ZN ? GO:0000428 ... P40422 38194460
    580760 8tun:C (3.4) BS01 KJ9 ? GO:0005886 ... A0A2S5T447 38570679
    580761 8tun:D (3.4) BS01 KJ9 ? GO:0005886 ... A0A2S5T447 38570679
    580762 8tuq:A (2.0) BS01 peptide ? GO:0005737 ... P52293 38108201
    580763 8tur:A (2.15) BS01 peptide ? GO:0005737 ... P52293 38108201
    580764 8tus:A (2.6) BS01 peptide ? GO:0005737 ... P52293 38108201
    580765 8tut:A (2.55) BS01 peptide ? GO:0005737 ... P52293 38108201
    580766 8tuu:A (2.5) BS01 peptide ? GO:0005737 ... P52293 38108201
    580767 8tuv:A (2.3) BS01 peptide ? GO:0005737 ... P52293 38108201
    580768 8tuv:A (2.3) BS02 peptide ? GO:0005737 ... P52293 38108201
    580769 8tux:M (3.9) BS01 rna ? GO:0039666 ... Q38061 38574145
    580770 8tux:ab (3.9) BS01 rna ? GO:0003723 ... P03630 38574145
    580771 8tux:m (3.9) BS01 rna ? GO:0039666 ... Q38061 38574145
    580772 8tvi:A (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    580773 8tvi:B (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    580774 8tvi:C (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    580775 8tvi:D (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    580776 8tvp:A (3.7) BS01 dna 2.7.7.6 GO:0000428 ... P04050 38194460
    580777 8tvp:A (3.7) BS02 rna 2.7.7.6 GO:0000428 ... P04050 38194460
    580778 8tvp:A (3.7) BS03 dna 2.7.7.6 GO:0000428 ... P04050 38194460
    580779 8tvp:A (3.7) BS04 ZN 2.7.7.6 GO:0000428 ... P04050 38194460
    580780 8tvp:A (3.7) BS05 ZN 2.7.7.6 GO:0000428 ... P04050 38194460
    580781 8tvp:A (3.7) BS06 MG 2.7.7.6 GO:0000428 ... P04050 38194460
    580782 8tvp:B (3.7) BS01 dna 2.7.7.6 GO:0000428 ... P08518 38194460
    580783 8tvp:B (3.7) BS02 dna 2.7.7.6 GO:0000428 ... P08518 38194460
    580784 8tvp:B (3.7) BS03 ZN 2.7.7.6 GO:0000428 ... P08518 38194460
    580785 8tvp:C (3.7) BS01 ZN ? GO:0000428 ... P16370 38194460
    580786 8tvp:E (3.7) BS01 dna ? GO:0000428 ... P20434 38194460
    580787 8tvp:I (3.7) BS01 ZN ? GO:0000428 ... P27999 38194460
    580788 8tvp:I (3.7) BS02 ZN ? GO:0000428 ... P27999 38194460
    580789 8tvp:J (3.7) BS01 ZN ? GO:0000428 ... P22139 38194460
    580790 8tvp:L (3.7) BS01 ZN ? GO:0000428 ... P40422 38194460
    580791 8tvq:A (4.6) BS01 dna 2.7.7.6 GO:0000428 ... P04050 38194460
    580792 8tvq:A (4.6) BS02 dna 2.7.7.6 GO:0000428 ... P04050 38194460
    580793 8tvq:A (4.6) BS03 rna 2.7.7.6 GO:0000428 ... P04050 38194460
    580794 8tvq:A (4.6) BS04 ZN 2.7.7.6 GO:0000428 ... P04050 38194460
    580795 8tvq:A (4.6) BS05 ZN 2.7.7.6 GO:0000428 ... P04050 38194460
    580796 8tvq:A (4.6) BS06 MG 2.7.7.6 GO:0000428 ... P04050 38194460
    580797 8tvq:B (4.6) BS01 dna 2.7.7.6 GO:0000428 ... P08518 38194460
    580798 8tvq:B (4.6) BS02 dna 2.7.7.6 GO:0000428 ... P08518 38194460
    580799 8tvq:B (4.6) BS03 rna 2.7.7.6 GO:0000428 ... P08518 38194460
    580800 8tvq:B (4.6) BS04 ZN 2.7.7.6 GO:0000428 ... P08518 38194460
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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