Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 4059 4060 4061 4062 4063 4064 4065 4066 4067 4068 4069 4070 4071 4072 4073 4074 4075 4076 4077 4078 4079 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    813601 8xrv:D (2.4) BS02 CA N/A GO:0004553 ... N/A 38527679
    813602 8xrv:E (2.4) BS01 BGC N/A GO:0004553 ... N/A 38527679
    813603 8xrv:E (2.4) BS02 CA N/A GO:0004553 ... N/A 38527679
    813604 8xrv:F (2.4) BS01 BGC N/A GO:0004553 ... N/A 38527679
    813605 8xrv:F (2.4) BS02 CA N/A GO:0004553 ... N/A 38527679
    813606 8xrx:A (2.5) BS01 BGC N/A GO:0004553 ... N/A 38527679
    813607 8xrx:A (2.5) BS02 BGC N/A GO:0004553 ... N/A 38527679
    813608 8xrx:A (2.5) BS03 CA N/A GO:0004553 ... N/A 38527679
    813609 8xrx:B (2.5) BS01 BGC N/A GO:0004553 ... N/A 38527679
    813610 8xrx:B (2.5) BS02 GLC N/A GO:0004553 ... N/A 38527679
    813611 8xrx:B (2.5) BS03 CA N/A GO:0004553 ... N/A 38527679
    813612 8xrx:C (2.5) BS01 BGC N/A GO:0004553 ... N/A 38527679
    813613 8xrx:C (2.5) BS02 CA N/A GO:0004553 ... N/A 38527679
    813614 8xrx:D (2.5) BS01 BGC N/A GO:0004553 ... N/A 38527679
    813615 8xrx:D (2.5) BS02 CA N/A GO:0004553 ... N/A 38527679
    813616 8xrx:E (2.5) BS01 CA N/A GO:0004553 ... N/A 38527679
    813617 8xrx:F (2.5) BS01 BGC N/A GO:0004553 ... N/A 38527679
    813618 8xrx:F (2.5) BS02 CA N/A GO:0004553 ... N/A 38527679
    813619 8xsx:CA (2.4) BS01 rna N/A GO:0003676 ... Q9UQ80 38942792
    813620 8xsx:CB (2.4) BS01 rna N/A GO:0002244 ... P13639 38942792
    813621 8xsx:CB (2.4) BS02 rna N/A GO:0002244 ... P13639 38942792
    813622 8xsx:CB (2.4) BS03 ADP N/A GO:0002244 ... P13639 38942792
    813623 8xsx:CD (2.4) BS01 rna N/A GO:0003723 ... Q8NC51 38942792
    813624 8xsx:LA (2.4) BS01 rna N/A GO:0002181 ... P62917 38942792
    813625 8xsx:LA (2.4) BS02 rna N/A GO:0002181 ... P62917 38942792
    813626 8xsx:LA (2.4) BS03 MG N/A GO:0002181 ... P62917 38942792
    813627 8xsx:LB (2.4) BS01 rna N/A GO:0002181 ... P39023 38942792
    813628 8xsx:LC (2.4) BS01 rna N/A GO:0002181 ... P36578 38942792
    813629 8xsx:LC (2.4) BS02 rna N/A GO:0002181 ... P36578 38942792
    813630 8xsx:LD (2.4) BS01 rna N/A GO:0000027 ... P46777 38942792
    813631 8xsx:LD (2.4) BS02 rna N/A GO:0000027 ... P46777 38942792
    813632 8xsx:LE (2.4) BS01 rna N/A GO:0000027 ... Q02878 38942792
    813633 8xsx:LF (2.4) BS01 rna N/A GO:0000463 ... P18124 38942792
    813634 8xsx:LF (2.4) BS02 rna N/A GO:0000463 ... P18124 38942792
    813635 8xsx:LG (2.4) BS01 rna N/A GO:0000470 ... P62424 38942792
    813636 8xsx:LG (2.4) BS02 rna N/A GO:0000470 ... P62424 38942792
    813637 8xsx:LH (2.4) BS01 rna N/A GO:0002181 ... P32969 38942792
    813638 8xsx:LI (2.4) BS01 rna N/A GO:0000027 ... Q96L21 38942792
    813639 8xsx:LI (2.4) BS02 rna N/A GO:0000027 ... Q96L21 38942792
    813640 8xsx:LJ (2.4) BS01 rna N/A GO:0000027 ... P62913 38942792
    813641 8xsx:LJ (2.4) BS02 rna N/A GO:0000027 ... P62913 38942792
    813642 8xsx:LK (2.4) BS01 rna N/A GO:0002181 ... P30050 38942792
    813643 8xsx:LL (2.4) BS01 rna N/A GO:0001824 ... P26373 38942792
    813644 8xsx:LL (2.4) BS02 rna N/A GO:0001824 ... P26373 38942792
    813645 8xsx:LM (2.4) BS01 rna N/A GO:0002181 ... P50914 38942792
    813646 8xsx:LN (2.4) BS01 rna N/A GO:0002181 ... P61313 38942792
    813647 8xsx:LN (2.4) BS02 rna N/A GO:0002181 ... P61313 38942792
    813648 8xsx:LO (2.4) BS01 rna N/A GO:0002181 ... P40429 38942792
    813649 8xsx:LP (2.4) BS01 rna N/A GO:0002181 ... P18621 38942792
    813650 8xsx:LP (2.4) BS02 rna N/A GO:0002181 ... P18621 38942792
    813651 8xsx:LQ (2.4) BS01 rna N/A GO:0002181 ... Q07020 38942792
    813652 8xsx:LR (2.4) BS01 rna N/A GO:0002181 ... P84098 38942792
    813653 8xsx:LR (2.4) BS02 rna N/A GO:0002181 ... P84098 38942792
    813654 8xsx:LS (2.4) BS01 rna N/A GO:0002181 ... Q02543 38942792
    813655 8xsx:LS (2.4) BS02 rna N/A GO:0002181 ... Q02543 38942792
    813656 8xsx:LT (2.4) BS01 rna N/A GO:0002181 ... P46778 38942792
    813657 8xsx:LT (2.4) BS02 rna N/A GO:0002181 ... P46778 38942792
    813658 8xsx:LU (2.4) BS01 rna N/A GO:0002181 ... P35268 38942792
    813659 8xsx:LV (2.4) BS01 rna N/A GO:0000122 ... P62829 38942792
    813660 8xsx:LW (2.4) BS01 rna N/A GO:0000027 ... P83731 38942792
    813661 8xsx:LW (2.4) BS02 rna N/A GO:0000027 ... P83731 38942792
    813662 8xsx:LX (2.4) BS01 rna N/A GO:0000027 ... P62750 38942792
    813663 8xsx:LX (2.4) BS02 rna N/A GO:0000027 ... P62750 38942792
    813664 8xsx:LY (2.4) BS01 rna N/A GO:0002181 ... P61254 38942792
    813665 8xsx:LY (2.4) BS02 rna N/A GO:0002181 ... P61254 38942792
    813666 8xsx:LZ (2.4) BS01 rna N/A GO:0002181 ... P61353 38942792
    813667 8xsx:La (2.4) BS01 rna N/A GO:0002181 ... P46776 38942792
    813668 8xsx:Lb (2.4) BS01 rna N/A GO:0002181 ... P47914 38942792
    813669 8xsx:Lc (2.4) BS01 rna N/A GO:0002181 ... P62888 38942792
    813670 8xsx:Lc (2.4) BS02 rna N/A GO:0002181 ... P62888 38942792
    813671 8xsx:Ld (2.4) BS01 rna N/A GO:0002181 ... P62899 38942792
    813672 8xsx:Le (2.4) BS01 rna N/A GO:0002181 ... P62910 38942792
    813673 8xsx:Le (2.4) BS02 MG N/A GO:0002181 ... P62910 38942792
    813674 8xsx:Lf (2.4) BS01 rna N/A GO:0000049 ... P18077 38942792
    813675 8xsx:Lg (2.4) BS01 rna N/A GO:0002181 ... P49207 38942792
    813676 8xsx:Lg (2.4) BS02 MG N/A GO:0002181 ... P49207 38942792
    813677 8xsx:Lg (2.4) BS03 ZN N/A GO:0002181 ... P49207 38942792
    813678 8xsx:Lh (2.4) BS01 rna N/A GO:0000463 ... P42766 38942792
    813679 8xsx:Lh (2.4) BS02 rna N/A GO:0000463 ... P42766 38942792
    813680 8xsx:Li (2.4) BS01 rna N/A GO:0002181 ... Q9Y3U8 38942792
    813681 8xsx:Lj (2.4) BS01 rna N/A GO:0002181 ... P61927 38942792
    813682 8xsx:Lj (2.4) BS02 rna N/A GO:0002181 ... P61927 38942792
    813683 8xsx:Lj (2.4) BS03 ZN N/A GO:0002181 ... P61927 38942792
    813684 8xsx:Lk (2.4) BS01 rna N/A GO:0001501 ... P63173 38942792
    813685 8xsx:Ll (2.4) BS01 rna N/A GO:0002181 ... P62891 38942792
    813686 8xsx:Ll (2.4) BS02 rna N/A GO:0002181 ... P62891 38942792
    813687 8xsx:Lm (2.4) BS01 rna N/A GO:0002181 ... P62987 38942792
    813688 8xsx:Lm (2.4) BS02 ZN N/A GO:0002181 ... P62987 38942792
    813689 8xsx:Lo (2.4) BS01 rna N/A GO:0002181 ... P83881 38942792
    813690 8xsx:Lo (2.4) BS02 rna N/A GO:0002181 ... P83881 38942792
    813691 8xsx:Lo (2.4) BS03 ZN N/A GO:0002181 ... P83881 38942792
    813692 8xsx:Lp (2.4) BS01 rna N/A GO:0002181 ... P61513 38942792
    813693 8xsx:Lp (2.4) BS02 ZN N/A GO:0002181 ... P61513 38942792
    813694 8xsx:Lr (2.4) BS01 rna N/A GO:0002181 ... P46779 38942792
    813695 8xsx:Ls (2.4) BS01 rna N/A GO:0000027 ... P05388 38942792
    813696 8xsx:Lz (2.4) BS01 rna N/A GO:0002181 ... P62906 38942792
    813697 8xsx:SA (2.4) BS01 rna N/A GO:0000028 ... P08865 38942792
    813698 8xsx:SB (2.4) BS01 rna N/A GO:0002181 ... P61247 38942792
    813699 8xsx:SC (2.4) BS01 rna N/A GO:0002181 ... P15880 38942792
    813700 8xsx:SD (2.4) BS01 rna N/A GO:0000977 ... P23396 38942792
    813701 8xsx:SE (2.4) BS01 rna N/A GO:0002181 ... P62701 38942792
    813702 8xsx:SF (2.4) BS01 rna N/A GO:0000028 ... P46782 38942792
    813703 8xsx:SG (2.4) BS01 rna N/A GO:0000082 ... P62753 38942792
    813704 8xsx:SH (2.4) BS01 rna N/A GO:0001843 ... P62081 38942792
    813705 8xsx:SI (2.4) BS01 rna N/A GO:0000462 ... P62241 38942792
    813706 8xsx:SI (2.4) BS02 rna N/A GO:0000462 ... P62241 38942792
    813707 8xsx:SJ (2.4) BS01 rna N/A GO:0002181 ... P46781 38942792
    813708 8xsx:SK (2.4) BS01 rna N/A GO:0002181 ... P46783 38942792
    813709 8xsx:SL (2.4) BS01 rna N/A GO:0002181 ... P62280 38942792
    813710 8xsx:SM (2.4) BS01 rna N/A GO:0002181 ... P25398 38942792
    813711 8xsx:SN (2.4) BS01 rna N/A GO:0002181 ... P62277 38942792
    813712 8xsx:SN (2.4) BS02 rna N/A GO:0002181 ... P62277 38942792
    813713 8xsx:SO (2.4) BS01 rna N/A GO:0000028 ... P62263 38942792
    813714 8xsx:SP (2.4) BS01 rna N/A GO:0000028 ... P62841 38942792
    813715 8xsx:SQ (2.4) BS01 rna N/A GO:0000462 ... P62249 38942792
    813716 8xsx:SR (2.4) BS01 rna N/A GO:0002181 ... P08708 38942792
    813717 8xsx:SS (2.4) BS01 rna N/A GO:0002181 ... P62269 38942792
    813718 8xsx:ST (2.4) BS01 rna N/A GO:0000028 ... P39019 38942792
    813719 8xsx:SU (2.4) BS01 rna N/A GO:0002181 ... P60866 38942792
    813720 8xsx:SW (2.4) BS01 rna N/A GO:0002181 ... P62244 38942792
    813721 8xsx:SX (2.4) BS01 rna N/A GO:0002181 ... P62266 38942792
    813722 8xsx:SY (2.4) BS01 rna N/A GO:0002181 ... P62847 38942792
    813723 8xsx:SZ (2.4) BS01 rna N/A GO:0002181 ... P62851 38942792
    813724 8xsx:Sa (2.4) BS01 rna N/A GO:0002181 ... P62854 38942792
    813725 8xsx:Sa (2.4) BS02 ZN N/A GO:0002181 ... P62854 38942792
    813726 8xsx:Sb (2.4) BS01 rna N/A GO:0000028 ... P42677 38942792
    813727 8xsx:Sc (2.4) BS01 rna N/A GO:0000028 ... P62857 38942792
    813728 8xsx:Sd (2.4) BS01 rna N/A GO:0002181 ... P62273 38942792
    813729 8xsx:Sf (2.4) BS01 rna N/A GO:0002181 ... P62979 38942792
    813730 8xsx:Sg (2.4) BS01 rna N/A GO:0001891 ... P63244 38942792
    813731 8xsy:CA (3.0) BS01 rna N/A GO:0003676 ... Q9UQ80 38942792
    813732 8xsy:CE (3.0) BS01 rna N/A GO:0003713 ... Q96CT7 38942792
    813733 8xsy:LA (3.0) BS01 rna N/A GO:0002181 ... P62917 38942792
    813734 8xsy:LA (3.0) BS02 rna N/A GO:0002181 ... P62917 38942792
    813735 8xsy:LA (3.0) BS03 MG N/A GO:0002181 ... P62917 38942792
    813736 8xsy:LB (3.0) BS01 rna N/A GO:0002181 ... P39023 38942792
    813737 8xsy:LC (3.0) BS01 rna N/A GO:0002181 ... P36578 38942792
    813738 8xsy:LC (3.0) BS02 rna N/A GO:0002181 ... P36578 38942792
    813739 8xsy:LD (3.0) BS01 rna N/A GO:0000027 ... P46777 38942792
    813740 8xsy:LD (3.0) BS02 rna N/A GO:0000027 ... P46777 38942792
    813741 8xsy:LE (3.0) BS01 rna N/A GO:0000027 ... Q02878 38942792
    813742 8xsy:LF (3.0) BS01 rna N/A GO:0000463 ... P18124 38942792
    813743 8xsy:LF (3.0) BS02 rna N/A GO:0000463 ... P18124 38942792
    813744 8xsy:LG (3.0) BS01 rna N/A GO:0000470 ... P62424 38942792
    813745 8xsy:LG (3.0) BS02 rna N/A GO:0000470 ... P62424 38942792
    813746 8xsy:LH (3.0) BS01 rna N/A GO:0002181 ... P32969 38942792
    813747 8xsy:LI (3.0) BS01 rna N/A GO:0000027 ... P27635 38942792
    813748 8xsy:LI (3.0) BS02 rna N/A GO:0000027 ... P27635 38942792
    813749 8xsy:LJ (3.0) BS01 rna N/A GO:0000027 ... P62913 38942792
    813750 8xsy:LJ (3.0) BS02 rna N/A GO:0000027 ... P62913 38942792
    813751 8xsy:LL (3.0) BS01 rna N/A GO:0001824 ... P26373 38942792
    813752 8xsy:LL (3.0) BS02 rna N/A GO:0001824 ... P26373 38942792
    813753 8xsy:LM (3.0) BS01 rna N/A GO:0002181 ... P50914 38942792
    813754 8xsy:LN (3.0) BS01 rna N/A GO:0002181 ... P61313 38942792
    813755 8xsy:LN (3.0) BS02 rna N/A GO:0002181 ... P61313 38942792
    813756 8xsy:LO (3.0) BS01 rna N/A GO:0002181 ... P40429 38942792
    813757 8xsy:LP (3.0) BS01 rna N/A GO:0002181 ... P18621 38942792
    813758 8xsy:LP (3.0) BS02 rna N/A GO:0002181 ... P18621 38942792
    813759 8xsy:LQ (3.0) BS01 rna N/A GO:0002181 ... Q07020 38942792
    813760 8xsy:LR (3.0) BS01 rna N/A GO:0002181 ... P84098 38942792
    813761 8xsy:LR (3.0) BS02 rna N/A GO:0002181 ... P84098 38942792
    813762 8xsy:LS (3.0) BS01 rna N/A GO:0002181 ... Q02543 38942792
    813763 8xsy:LS (3.0) BS02 rna N/A GO:0002181 ... Q02543 38942792
    813764 8xsy:LT (3.0) BS01 rna N/A GO:0002181 ... P46778 38942792
    813765 8xsy:LT (3.0) BS02 rna N/A GO:0002181 ... P46778 38942792
    813766 8xsy:LU (3.0) BS01 rna N/A GO:0002181 ... P35268 38942792
    813767 8xsy:LV (3.0) BS01 rna N/A GO:0000122 ... P62829 38942792
    813768 8xsy:LW (3.0) BS01 rna N/A GO:0000027 ... P83731 38942792
    813769 8xsy:LW (3.0) BS02 rna N/A GO:0000027 ... P83731 38942792
    813770 8xsy:LX (3.0) BS01 rna N/A GO:0000027 ... P62750 38942792
    813771 8xsy:LX (3.0) BS02 rna N/A GO:0000027 ... P62750 38942792
    813772 8xsy:LY (3.0) BS01 rna N/A GO:0002181 ... P61254 38942792
    813773 8xsy:LY (3.0) BS02 rna N/A GO:0002181 ... P61254 38942792
    813774 8xsy:LZ (3.0) BS01 rna N/A GO:0002181 ... P61353 38942792
    813775 8xsy:La (3.0) BS01 rna N/A GO:0002181 ... P46776 38942792
    813776 8xsy:Lb (3.0) BS01 rna N/A GO:0002181 ... P47914 38942792
    813777 8xsy:Lc (3.0) BS01 rna N/A GO:0002181 ... P62888 38942792
    813778 8xsy:Lc (3.0) BS02 peptide N/A GO:0002181 ... P62888 38942792
    813779 8xsy:Ld (3.0) BS01 rna N/A GO:0002181 ... P62899 38942792
    813780 8xsy:Le (3.0) BS01 rna N/A GO:0002181 ... P62910 38942792
    813781 8xsy:Le (3.0) BS02 MG N/A GO:0002181 ... P62910 38942792
    813782 8xsy:Lf (3.0) BS01 rna N/A GO:0000049 ... P18077 38942792
    813783 8xsy:Lg (3.0) BS01 rna N/A GO:0002181 ... P49207 38942792
    813784 8xsy:Lg (3.0) BS02 peptide N/A GO:0002181 ... P49207 38942792
    813785 8xsy:Lg (3.0) BS03 MG N/A GO:0002181 ... P49207 38942792
    813786 8xsy:Lg (3.0) BS04 ZN N/A GO:0002181 ... P49207 38942792
    813787 8xsy:Lh (3.0) BS01 rna N/A GO:0000463 ... P42766 38942792
    813788 8xsy:Lh (3.0) BS02 rna N/A GO:0000463 ... P42766 38942792
    813789 8xsy:Li (3.0) BS01 rna N/A GO:0002181 ... Q9Y3U8 38942792
    813790 8xsy:Lj (3.0) BS01 rna N/A GO:0002181 ... P61927 38942792
    813791 8xsy:Lj (3.0) BS02 rna N/A GO:0002181 ... P61927 38942792
    813792 8xsy:Lj (3.0) BS03 ZN N/A GO:0002181 ... P61927 38942792
    813793 8xsy:Lk (3.0) BS01 rna N/A GO:0001501 ... P63173 38942792
    813794 8xsy:Ll (3.0) BS01 rna N/A GO:0002181 ... P62891 38942792
    813795 8xsy:Ll (3.0) BS02 rna N/A GO:0002181 ... P62891 38942792
    813796 8xsy:Lm (3.0) BS01 rna N/A GO:0002181 ... P62987 38942792
    813797 8xsy:Lm (3.0) BS02 ZN N/A GO:0002181 ... P62987 38942792
    813798 8xsy:Lo (3.0) BS01 rna N/A GO:0002181 ... P83881 38942792
    813799 8xsy:Lo (3.0) BS02 rna N/A GO:0002181 ... P83881 38942792
    813800 8xsy:Lo (3.0) BS03 ZN N/A GO:0002181 ... P83881 38942792
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218