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BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    811801 8wmw:B (3.3) BS09 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811802 8wmw:B (3.3) BS10 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811803 8wmw:B (3.3) BS11 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811804 8wmw:B (3.3) BS12 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811805 8wmw:B (3.3) BS13 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811806 8wmw:B (3.3) BS14 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811807 8wmw:B (3.3) BS15 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811808 8wmw:B (3.3) BS16 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811809 8wmw:B (3.3) BS17 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811810 8wmw:B (3.3) BS18 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811811 8wmw:B (3.3) BS19 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811812 8wmw:B (3.3) BS20 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811813 8wmw:B (3.3) BS21 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811814 8wmw:B (3.3) BS22 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811815 8wmw:B (3.3) BS23 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811816 8wmw:B (3.3) BS24 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811817 8wmw:B (3.3) BS25 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811818 8wmw:B (3.3) BS26 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811819 8wmw:B (3.3) BS27 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811820 8wmw:B (3.3) BS28 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811821 8wmw:B (3.3) BS29 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811822 8wmw:B (3.3) BS30 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811823 8wmw:B (3.3) BS31 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811824 8wmw:B (3.3) BS32 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811825 8wmw:B (3.3) BS33 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811826 8wmw:B (3.3) BS34 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811827 8wmw:B (3.3) BS35 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811828 8wmw:B (3.3) BS36 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811829 8wmw:B (3.3) BS37 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811830 8wmw:B (3.3) BS38 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811831 8wmw:B (3.3) BS39 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811832 8wmw:B (3.3) BS40 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811833 8wmw:B (3.3) BS41 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811834 8wmw:B (3.3) BS42 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811835 8wmw:B (3.3) BS43 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811836 8wmw:B (3.3) BS44 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811837 8wmw:B (3.3) BS45 PQN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811838 8wmw:B (3.3) BS46 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811839 8wmw:B (3.3) BS47 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811840 8wmw:B (3.3) BS48 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811841 8wmw:B (3.3) BS49 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811842 8wmw:B (3.3) BS50 CLA 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811843 8wmw:B (3.3) BS51 WVN 1.97.1.12 GO:0000287 ... A6MVZ6 38734819
    811844 8wmw:C (3.3) BS01 SF4 1.97.1.12 GO:0009055 ... A6MVS8 38734819
    811845 8wmw:C (3.3) BS02 SF4 1.97.1.12 GO:0009055 ... A6MVS8 38734819
    811846 8wmw:I (3.3) BS01 CLA ? GO:0009507 ... A6MVV1 38734819
    811847 8wmw:I (3.3) BS02 CLA ? GO:0009507 ... A6MVV1 38734819
    811848 8wmw:I (3.3) BS03 CLA ? GO:0009507 ... A6MVV1 38734819
    811849 8wmw:I (3.3) BS04 WVN ? GO:0009507 ... A6MVV1 38734819
    811850 8wmw:I (3.3) BS05 CLA ? GO:0009507 ... A6MVV1 38734819
    811851 8wmw:J (3.3) BS01 CLA ? GO:0009507 ... A6MVU6 38734819
    811852 8wmw:J (3.3) BS02 CLA ? GO:0009507 ... A6MVU6 38734819
    811853 8wmw:J (3.3) BS03 CLA ? GO:0009507 ... A6MVU6 38734819
    811854 8wmw:J (3.3) BS04 CLA ? GO:0009507 ... A6MVU6 38734819
    811855 8wmw:J (3.3) BS05 WVN ? GO:0009507 ... A6MVU6 38734819
    811856 8wmw:J (3.3) BS06 CLA ? GO:0009507 ... A6MVU6 38734819
    811857 8wmw:J (3.3) BS07 II0 ? GO:0009507 ... A6MVU6 38734819
    811858 8wmw:J (3.3) BS08 CLA ? GO:0009507 ... A6MVU6 38734819
    811859 8wmw:J (3.3) BS09 CLA ? GO:0009507 ... A6MVU6 38734819
    811860 8wmw:K (3.3) BS01 CLA ? GO:0009507 ... A6MVS9 38734819
    811861 8wmw:K (3.3) BS02 CLA ? GO:0009507 ... A6MVS9 38734819
    811862 8wmw:K (3.3) BS03 WVN ? GO:0009507 ... A6MVS9 38734819
    811863 8wmw:K (3.3) BS04 CLA ? GO:0009507 ... A6MVS9 38734819
    811864 8wmw:K (3.3) BS05 CLA ? GO:0009507 ... A6MVS9 38734819
    811865 8wmw:L (3.3) BS01 CLA ? GO:0009507 ... A6MVV8 38734819
    811866 8wmw:L (3.3) BS02 CLA ? GO:0009507 ... A6MVV8 38734819
    811867 8wmw:L (3.3) BS03 CLA ? GO:0009507 ... A6MVV8 38734819
    811868 8wmw:L (3.3) BS04 CLA ? GO:0009507 ... A6MVV8 38734819
    811869 8wmw:L (3.3) BS05 WVN ? GO:0009507 ... A6MVV8 38734819
    811870 8wmw:L (3.3) BS06 CLA ? GO:0009507 ... A6MVV8 38734819
    811871 8wmw:L (3.3) BS07 CLA ? GO:0009507 ... A6MVV8 38734819
    811872 8wmw:L (3.3) BS08 CLA ? GO:0009507 ... A6MVV8 38734819
    811873 8wmw:L (3.3) BS09 WVN ? GO:0009507 ... A6MVV8 38734819
    811874 8wmw:L (3.3) BS10 CLA ? GO:0009507 ... A6MVV8 38734819
    811875 8wmw:L (3.3) BS11 CLA ? GO:0009507 ... A6MVV8 38734819
    811876 8wmw:L (3.3) BS12 II0 ? GO:0009507 ... A6MVV8 38734819
    811877 8wmw:L (3.3) BS13 CLA ? GO:0009507 ... A6MVV8 38734819
    811878 8wmw:M (3.3) BS01 CLA ? GO:0009507 ... A6MVT4 38734819
    811879 8wmw:M (3.3) BS02 WVN ? GO:0009507 ... A6MVT4 38734819
    811880 8wmy:A (1.91) BS01 ADP 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    811881 8wmy:A (1.91) BS02 MG 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    811882 8wmy:A (1.91) BS03 MG 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    811883 8wmy:B (1.91) BS01 ADP 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    811884 8wmy:B (1.91) BS02 MG 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    811885 8wmy:B (1.91) BS03 MG 3.6.1.41 GO:0000166 ... A0A4U7IGH6 N/A
    811886 8wnf:A (1.9) BS01 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    811887 8wng:A (1.92) BS01 ILE 6.1.1.5 GO:0000049 ... P56456 38246751
    811888 8wng:A (1.92) BS02 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    811889 8wni:A (1.95) BS01 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    811890 8wni:A (1.95) BS02 VAL 6.1.1.5 GO:0000049 ... P56456 38246751
    811891 8wnj:A (1.78) BS01 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    811892 8wnj:A (1.78) BS02 GV6 6.1.1.5 GO:0000049 ... P56456 38246751
    811893 8wnt:B (3.42) BS01 ALA ? GO:0003333 ... Q9NS82 38589439
    811894 8wny:B (3.5) BS01 DSN ? GO:0003333 ... Q9NS82 38589439
    811895 8wo2:A (2.34) BS01 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    811896 8wo2:A (2.34) BS02 WN9 6.1.1.5 GO:0000049 ... P56456 38246751
    811897 8wo3:A (2.2) BS01 ZN 6.1.1.5 GO:0000049 ... P56456 38246751
    811898 8wo3:A (2.2) BS02 MRC 6.1.1.5 GO:0000049 ... P56456 38246751
    811899 8wo8:A (2.78) BS01 rna 3.1.26.- GO:0003723 ... Q8U4Q7 38302756
    811900 8wom:A (3.5) BS01 BLD ? GO:0005515 ... Q9LJX0 38513023
    811901 8woo:A (3.9) BS01 ANP ? GO:0005515 ... Q9LJX0 38513023
    811902 8woo:A (3.9) BS02 ANP ? GO:0005515 ... Q9LJX0 38513023
    811903 8woo:A (3.9) BS03 BLD ? GO:0005515 ... Q9LJX0 38513023
    811904 8wop:A (2.35) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811905 8wop:A (2.35) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811906 8wop:B (2.35) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811907 8wop:B (2.35) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811908 8woq:A (2.85) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    811909 8woq:A (2.85) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    811910 8woq:A (2.85) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    811911 8woq:A (2.85) BS04 CLR ? GO:0016020 ... Q9NXL6 38378654
    811912 8woq:A (2.85) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    811913 8woq:A (2.85) BS06 SPL ? GO:0016020 ... Q9NXL6 38378654
    811914 8woq:B (2.85) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    811915 8woq:B (2.85) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    811916 8woq:B (2.85) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    811917 8woq:B (2.85) BS04 SPL ? GO:0016020 ... Q9NXL6 38378654
    811918 8woq:B (2.85) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    811919 8woq:B (2.85) BS06 CLR ? GO:0016020 ... Q9NXL6 38378654
    811920 8woq:B (2.85) BS07 CLR ? GO:0016020 ... Q9NXL6 38378654
    811921 8woq:B (2.85) BS08 CLR ? GO:0016020 ... Q9NXL6 38378654
    811922 8wor:A (2.66) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    811923 8wor:A (2.66) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    811924 8wor:A (2.66) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    811925 8wor:A (2.66) BS04 CLR ? GO:0016020 ... Q9NXL6 38378654
    811926 8wor:A (2.66) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    811927 8wor:A (2.66) BS06 SPL ? GO:0016020 ... Q9NXL6 38378654
    811928 8wor:A (2.66) BS07 CLR ? GO:0016020 ... Q9NXL6 38378654
    811929 8wor:B (2.66) BS01 ZN ? GO:0016020 ... Q9NXL6 38378654
    811930 8wor:B (2.66) BS02 CA ? GO:0016020 ... Q9NXL6 38378654
    811931 8wor:B (2.66) BS03 SPL ? GO:0016020 ... Q9NXL6 38378654
    811932 8wor:B (2.66) BS04 CLR ? GO:0016020 ... Q9NXL6 38378654
    811933 8wor:B (2.66) BS05 CLR ? GO:0016020 ... Q9NXL6 38378654
    811934 8wor:B (2.66) BS06 CLR ? GO:0016020 ... Q9NXL6 38378654
    811935 8wor:B (2.66) BS07 CLR ? GO:0016020 ... Q9NXL6 38378654
    811936 8wos:A (3.37) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    811937 8wos:A (3.37) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    811938 8wos:A (3.37) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    811939 8wos:A (3.37) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    811940 8wos:B (3.37) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    811941 8wos:B (3.37) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    811942 8wos:B (3.37) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    811943 8wos:B (3.37) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    811944 8wot:A (3.18) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    811945 8wot:A (3.18) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    811946 8wot:A (3.18) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    811947 8wot:A (3.18) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    811948 8wot:B (3.18) BS01 CLR ? GO:0016020 ... Q9NXL6 38378654
    811949 8wot:B (3.18) BS02 CLR ? GO:0016020 ... Q9NXL6 38378654
    811950 8wot:B (3.18) BS03 CLR ? GO:0016020 ... Q9NXL6 38378654
    811951 8wot:B (3.18) BS04 ZN ? GO:0016020 ... Q9NXL6 38378654
    811952 8wov:A (2.25) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811953 8wov:A (2.25) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811954 8wov:B (2.25) BS01 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811955 8wov:B (2.25) BS02 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811956 8wow:A (2.6) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811957 8wow:A (2.6) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811958 8wow:B (2.6) BS01 UDP 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811959 8wow:B (2.6) BS02 NAD 5.1.3.2 GO:0003978 ... Q9T0A7 38678521
    811960 8wox:A (2.75) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... G1TEF4 38112468
    811961 8woy:A (3.14) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... G1TEF4 38112468
    811962 8woz:A (3.25) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... G1TEF4 38112468
    811963 8wp0:A (3.4) BS01 ATP ? GO:0005515 ... Q9LJX0 38513023
    811964 8wp0:A (3.4) BS02 ATP ? GO:0005515 ... Q9LJX0 38513023
    811965 8wpe:A (2.7) BS01 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811966 8wpe:A (2.7) BS02 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811967 8wpe:A (2.7) BS03 D3T 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811968 8wpe:A (2.7) BS04 MG 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811969 8wpe:C (2.7) BS01 dna 3.2.2.27 GO:0003677 ... M1LL92 37995690
    811970 8wpe:E (2.7) BS01 dna ? GO:0019031 ... A0A7H0DN82 37995690
    811971 8wpf:A (3.0) BS01 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811972 8wpf:A (3.0) BS02 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811973 8wpf:A (3.0) BS03 D3T 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811974 8wpf:A (3.0) BS04 MG 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811975 8wpf:B (3.0) BS01 dna ? GO:0006260 ... A0A7H0DNC0 37995690
    811976 8wpf:C (3.0) BS01 dna 3.2.2.27 GO:0003677 ... M1LL92 37995690
    811977 8wpf:E (3.0) BS01 dna ? GO:0019031 ... A0A7H0DN82 37995690
    811978 8wpg:A (2.7) BS01 TRP ? GO:0004930 ... P41180 37919470
    811979 8wpg:A (2.7) BS02 CA ? GO:0004930 ... P41180 37919470
    811980 8wpg:A (2.7) BS03 YP4 ? GO:0004930 ... P41180 37919470
    811981 8wpg:B (2.7) BS01 TRP ? GO:0004930 ... P41180 37919470
    811982 8wpg:B (2.7) BS02 CA ? GO:0004930 ... P41180 37919470
    811983 8wpg:B (2.7) BS03 YP4 ? GO:0004930 ... P41180 37919470
    811984 8wpk:A (2.7) BS01 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811985 8wpk:A (2.7) BS02 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811986 8wpk:A (2.7) BS03 D3T 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811987 8wpk:A (2.7) BS04 MG 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811988 8wpk:B (2.7) BS01 dna ? GO:0006260 ... A0A7H0DNC0 37995690
    811989 8wpk:C (2.7) BS01 dna 3.2.2.27 GO:0003677 ... M1LL92 37995690
    811990 8wpk:E (2.7) BS01 dna ? GO:0019031 ... A0A7H0DN82 37995690
    811991 8wpp:A (3.1) BS01 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811992 8wpp:A (3.1) BS02 dna 2.7.7.7 GO:0000166 ... A0A7H0DN44 37995690
    811993 8wpp:B (3.1) BS01 dna ? GO:0006260 ... A0A7H0DNC0 37995690
    811994 8wpp:C (3.1) BS01 dna 3.2.2.27 GO:0003677 ... M1LL92 37995690
    811995 8wpp:E (3.1) BS01 dna ? GO:0019031 ... A0A7H0DN82 37995690
    811996 8wpp:E (3.1) BS02 dna ? GO:0019031 ... A0A7H0DN82 37995690
    811997 8wpu:A (3.1) BS01 TRP ? GO:0004930 ... P41180 37919470
    811998 8wpu:A (3.1) BS02 CA ? GO:0004930 ... P41180 37919470
    811999 8wpu:A (3.1) BS03 YP4 ? GO:0004930 ... P41180 37919470
    812000 8wpu:B (3.1) BS01 YP4 ? GO:0004930 ... P41180 37919470

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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