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BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    810001 8wdu:0 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810002 8wdu:1 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    810003 8wdu:1 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    810004 8wdu:1 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    810005 8wdu:1 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    810006 8wdu:2 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810007 8wdu:2 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810008 8wdu:2 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810009 8wdu:3 (2.24) BS01 Z41 ? GO:0005886 ... D3RP67 38347078
    810010 8wdu:3 (2.24) BS02 CRT ? GO:0005886 ... D3RP67 38347078
    810011 8wdu:3 (2.24) BS03 BCL ? GO:0005886 ... D3RP67 38347078
    810012 8wdu:3 (2.24) BS04 BCL ? GO:0005886 ... D3RP67 38347078
    810013 8wdu:3 (2.24) BS05 CRT ? GO:0005886 ... D3RP67 38347078
    810014 8wdu:3 (2.24) BS06 BCL ? GO:0005886 ... D3RP67 38347078
    810015 8wdu:3 (2.24) BS07 CRT ? GO:0005886 ... D3RP67 38347078
    810016 8wdu:4 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810017 8wdu:4 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810018 8wdu:4 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810019 8wdu:5 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    810020 8wdu:5 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    810021 8wdu:5 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    810022 8wdu:5 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    810023 8wdu:5 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    810024 8wdu:6 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810025 8wdu:6 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810026 8wdu:6 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810027 8wdu:7 (2.24) BS01 UQ8 ? GO:0005886 ... D3RP69 38347078
    810028 8wdu:7 (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    810029 8wdu:7 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    810030 8wdu:7 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    810031 8wdu:7 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    810032 8wdu:7 (2.24) BS06 BCL ? GO:0005886 ... D3RP69 38347078
    810033 8wdu:7 (2.24) BS07 CRT ? GO:0005886 ... D3RP69 38347078
    810034 8wdu:8 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810035 8wdu:8 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810036 8wdu:8 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810037 8wdu:9 (2.24) BS01 UQ8 ? GO:0005886 ... D3RP69 38347078
    810038 8wdu:9 (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    810039 8wdu:9 (2.24) BS03 CRT ? GO:0005886 ... D3RP69 38347078
    810040 8wdu:9 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    810041 8wdu:9 (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    810042 8wdu:A (2.24) BS01 BCL ? GO:0005886 ... D3RP69 38347078
    810043 8wdu:A (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    810044 8wdu:A (2.24) BS03 CRT ? GO:0005886 ... D3RP69 38347078
    810045 8wdu:A (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    810046 8wdu:A (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    810047 8wdu:B (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810048 8wdu:B (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810049 8wdu:B (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810050 8wdu:C (2.24) BS01 HEM ? GO:0005506 ... O82947 38347078
    810051 8wdu:C (2.24) BS02 HEM ? GO:0005506 ... O82947 38347078
    810052 8wdu:C (2.24) BS03 HEM ? GO:0005506 ... O82947 38347078
    810053 8wdu:C (2.24) BS04 HEM ? GO:0005506 ... O82947 38347078
    810054 8wdu:C (2.24) BS05 MG ? GO:0005506 ... O82947 38347078
    810055 8wdu:C (2.24) BS06 Z41 ? GO:0005506 ... O82947 38347078
    810056 8wdu:D (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    810057 8wdu:D (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    810058 8wdu:D (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    810059 8wdu:D (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    810060 8wdu:D (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    810061 8wdu:D (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    810062 8wdu:E (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    810063 8wdu:E (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    810064 8wdu:E (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    810065 8wdu:F (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    810066 8wdu:F (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    810067 8wdu:F (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    810068 8wdu:F (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    810069 8wdu:F (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    810070 8wdu:F (2.24) BS06 BCL ? GO:0005886 ... D3RP74 38347078
    810071 8wdu:F (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    810072 8wdu:G (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    810073 8wdu:G (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    810074 8wdu:G (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    810075 8wdu:I (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    810076 8wdu:I (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    810077 8wdu:I (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    810078 8wdu:I (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    810079 8wdu:I (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    810080 8wdu:J (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810081 8wdu:J (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810082 8wdu:J (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810083 8wdu:K (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    810084 8wdu:K (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    810085 8wdu:K (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    810086 8wdu:K (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    810087 8wdu:L (2.24) BS01 BCL ? GO:0009772 ... P51762 38347078
    810088 8wdu:L (2.24) BS02 BPH ? GO:0009772 ... P51762 38347078
    810089 8wdu:L (2.24) BS03 UQ8 ? GO:0009772 ... P51762 38347078
    810090 8wdu:L (2.24) BS04 UQ8 ? GO:0009772 ... P51762 38347078
    810091 8wdu:L (2.24) BS05 BCL ? GO:0009772 ... P51762 38347078
    810092 8wdu:L (2.24) BS06 UQ8 ? GO:0009772 ... P51762 38347078
    810093 8wdu:L (2.24) BS07 FE ? GO:0009772 ... P51762 38347078
    810094 8wdu:L (2.24) BS08 BCL ? GO:0009772 ... P51762 38347078
    810095 8wdu:L (2.24) BS09 BPH ? GO:0009772 ... P51762 38347078
    810096 8wdu:L (2.24) BS10 MQ8 ? GO:0009772 ... P51762 38347078
    810097 8wdu:M (2.24) BS01 BPH ? GO:0009772 ... P51763 38347078
    810098 8wdu:M (2.24) BS02 BCL ? GO:0009772 ... P51763 38347078
    810099 8wdu:M (2.24) BS03 UQ8 ? GO:0009772 ... P51763 38347078
    810100 8wdu:M (2.24) BS04 FE ? GO:0009772 ... P51763 38347078
    810101 8wdu:M (2.24) BS05 BCL ? GO:0009772 ... P51763 38347078
    810102 8wdu:M (2.24) BS06 BCL ? GO:0009772 ... P51763 38347078
    810103 8wdu:M (2.24) BS07 BPH ? GO:0009772 ... P51763 38347078
    810104 8wdu:M (2.24) BS08 MQ8 ? GO:0009772 ... P51763 38347078
    810105 8wdu:M (2.24) BS09 CRT ? GO:0009772 ... P51763 38347078
    810106 8wdu:N (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810107 8wdu:N (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810108 8wdu:N (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810109 8wdu:O (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    810110 8wdu:O (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    810111 8wdu:O (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    810112 8wdu:O (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    810113 8wdu:O (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    810114 8wdu:P (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810115 8wdu:P (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810116 8wdu:P (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810117 8wdu:Q (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    810118 8wdu:Q (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    810119 8wdu:Q (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    810120 8wdu:Q (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    810121 8wdu:Q (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    810122 8wdu:Q (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    810123 8wdu:R (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810124 8wdu:R (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810125 8wdu:R (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810126 8wdu:S (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    810127 8wdu:S (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    810128 8wdu:S (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    810129 8wdu:S (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    810130 8wdu:S (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    810131 8wdu:S (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    810132 8wdu:T (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    810133 8wdu:T (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    810134 8wdu:T (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    810135 8wdu:U (2.24) BS01 UQ8 ? GO:0005886 ... D3RP74 38347078
    810136 8wdu:U (2.24) BS02 CRT ? GO:0005886 ... D3RP74 38347078
    810137 8wdu:U (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    810138 8wdu:U (2.24) BS04 CA ? GO:0005886 ... D3RP74 38347078
    810139 8wdu:U (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    810140 8wdu:U (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    810141 8wdu:U (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    810142 8wdu:V (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    810143 8wdu:V (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    810144 8wdu:V (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    810145 8wdu:W (2.24) BS01 UQ8 ? GO:0005886 ... D3RP74 38347078
    810146 8wdu:W (2.24) BS02 CRT ? GO:0005886 ... D3RP74 38347078
    810147 8wdu:W (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    810148 8wdu:W (2.24) BS04 CA ? GO:0005886 ... D3RP74 38347078
    810149 8wdu:W (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    810150 8wdu:W (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    810151 8wdu:W (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    810152 8wdu:X (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    810153 8wdu:X (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    810154 8wdu:X (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    810155 8wdu:Y (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    810156 8wdu:Y (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    810157 8wdu:Y (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    810158 8wdu:Y (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    810159 8wdu:Y (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    810160 8wdu:Y (2.24) BS06 BCL ? GO:0005886 ... D3RP74 38347078
    810161 8wdu:Y (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    810162 8wdu:Z (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    810163 8wdu:Z (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    810164 8wdu:Z (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    810165 8wdv:0 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810166 8wdv:0 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810167 8wdv:0 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810168 8wdv:1 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    810169 8wdv:1 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    810170 8wdv:1 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    810171 8wdv:1 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    810172 8wdv:1 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    810173 8wdv:2 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810174 8wdv:2 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810175 8wdv:2 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810176 8wdv:3 (2.24) BS01 CRT ? GO:0005886 ... D3RP67 38347078
    810177 8wdv:3 (2.24) BS02 BCL ? GO:0005886 ... D3RP67 38347078
    810178 8wdv:3 (2.24) BS03 BCL ? GO:0005886 ... D3RP67 38347078
    810179 8wdv:3 (2.24) BS04 CRT ? GO:0005886 ... D3RP67 38347078
    810180 8wdv:3 (2.24) BS05 BCL ? GO:0005886 ... D3RP67 38347078
    810181 8wdv:4 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810182 8wdv:4 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810183 8wdv:4 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810184 8wdv:5 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    810185 8wdv:5 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    810186 8wdv:5 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    810187 8wdv:5 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    810188 8wdv:6 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810189 8wdv:6 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810190 8wdv:6 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810191 8wdv:7 (2.24) BS01 UQ8 ? GO:0005886 ... D3RP69 38347078
    810192 8wdv:7 (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    810193 8wdv:7 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    810194 8wdv:7 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    810195 8wdv:7 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    810196 8wdv:7 (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    810197 8wdv:8 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    810198 8wdv:8 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    810199 8wdv:8 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    810200 8wdv:9 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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