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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    803201 8uee:H (3.2) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38518780
    803202 8uee:H (3.2) BS02 PO4 3.6.4.- GO:0000287 ... P68135 38518780
    803203 8uee:I (3.2) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38518780
    803204 8uee:J (3.2) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38518780
    803205 8uee:J (3.2) BS02 PO4 3.6.4.- GO:0000287 ... P68135 38518780
    803206 8uee:K (3.2) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38518780
    803207 8uee:K (3.2) BS02 PO4 3.6.4.- GO:0000287 ... P68135 38518780
    803208 8uee:L (3.2) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38518780
    803209 8uee:L (3.2) BS02 PO4 3.6.4.- GO:0000287 ... P68135 38518780
    803210 8uee:M (3.2) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38518780
    803211 8uee:M (3.2) BS02 PO4 3.6.4.- GO:0000287 ... P68135 38518780
    803212 8uej:AA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803213 8uej:AB (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803214 8uej:AC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803215 8uej:AC (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803216 8uej:AG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803217 8uej:AN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803218 8uej:AS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803219 8uej:AT (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803220 8uej:AU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803221 8uej:AZ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803222 8uej:BE (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803223 8uej:BE (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803224 8uej:BG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803225 8uej:BK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803226 8uej:BK (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803227 8uej:BL (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803228 8uej:BM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803229 8uej:BM (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803230 8uej:BQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803231 8uej:BW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803232 8uej:BX (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803233 8uej:BY (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803234 8uej:BY (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803235 8uej:CC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803236 8uej:CC (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803237 8uej:CE (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803238 8uej:CI (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803239 8uej:CK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803240 8uej:CP (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803241 8uej:CU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803242 8uej:CW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803243 8uej:DN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803244 8uej:DS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803245 8uej:DT (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803246 8uej:DY (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803247 8uej:EA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803248 8uej:EF (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803249 8uej:EK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803250 8uej:EL (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803251 8uej:EM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803252 8uej:EQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803253 8uej:EQ (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803254 8uej:ER (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803255 8uej:ES (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803256 8uej:EW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803257 8uej:EX (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803258 8uej:EY (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803259 8uej:FC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803260 8uej:FD (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803261 8uej:FJ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803262 8uej:FK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803263 8uej:FO (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803264 8uej:FP (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803265 8uej:FQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803266 8uej:FU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803267 8uej:FW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803268 8uej:GB (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803269 8uej:GG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803270 8uej:GN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803271 8uej:GO (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803272 8uej:GS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803273 8uej:GT (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803274 8uej:GU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803275 8uej:HC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803276 8uej:HD (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803277 8uej:HE (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803278 8uej:HI (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803279 8uej:HJ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803280 8uej:HK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803281 8uej:HO (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803282 8uej:HP (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803283 8uej:HQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803284 8uej:HU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803285 8uej:HW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803286 8uej:HW (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803287 8uej:IA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803288 8uej:IA (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803289 8uej:IB (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803290 8uej:IC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803291 8uej:IH (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803292 8uej:II (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803293 8uej:IM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803294 8uej:IN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803295 8uej:IT (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803296 8uej:IY (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803297 8uej:IZ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803298 8uej:JA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803299 8uej:JA (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803300 8uej:JF (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803301 8uej:JG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803302 8uej:JK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803303 8uej:JK (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803304 8uej:JL (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803305 8uej:JL (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803306 8uej:JM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803307 8uej:JQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803308 8uej:JR (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803309 8uej:JS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803310 8uej:JW (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803311 8uej:KC (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803312 8uej:KD (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803313 8uej:KE (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803314 8uej:KJ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803315 8uej:KK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803316 8uej:KO (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803317 8uej:KQ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803318 8uej:KV (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803319 8uej:LA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803320 8uej:LB (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803321 8uej:LB (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803322 8uej:LG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803323 8uej:LH (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803324 8uej:LI (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803325 8uej:LM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803326 8uej:LN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803327 8uej:LO (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803328 8uej:LO (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803329 8uej:LS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803330 8uej:LU (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803331 8uej:LY (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803332 8uej:LZ (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803333 8uej:MA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803334 8uej:ME (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803335 8uej:MG (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803336 8uej:MK (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803337 8uej:ML (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803338 8uej:ML (2.7) BS02 CA ? GO:0019028 ... D7RIC2 38701202
    803339 8uej:MM (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803340 8uej:MR (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803341 8uej:MS (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803342 8uej:NA (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803343 8uej:NN (2.7) BS01 CA ? GO:0019028 ... D7RIC2 38701202
    803344 8uel:A (2.49) BS01 PEP 4.2.1.11 GO:0000015 ... O96656 38033172
    803345 8uel:A (2.49) BS02 MG 4.2.1.11 GO:0000015 ... O96656 38033172
    803346 8uel:A (2.49) BS03 MG 4.2.1.11 GO:0000015 ... O96656 38033172
    803347 8uel:B (2.49) BS01 PEP 4.2.1.11 GO:0000015 ... O96656 38033172
    803348 8uel:B (2.49) BS02 MG 4.2.1.11 GO:0000015 ... O96656 38033172
    803349 8ueo:1B (3.8) BS01 SF4 N/A GO:0046872 ... A0A4X1VVS8 38811722
    803350 8ueo:1E (3.8) BS01 FES N/A GO:0005739 ... A0A4X1VRV3 38811722
    803351 8ueo:1F (3.8) BS01 FMN N/A GO:0005739 ... A0A4X1SZP7 38811722
    803352 8ueo:1F (3.8) BS02 SF4 N/A GO:0005739 ... A0A4X1SZP7 38811722
    803353 8ueo:1G (3.8) BS01 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    803354 8ueo:1G (3.8) BS02 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    803355 8ueo:1G (3.8) BS03 FES N/A GO:0005743 ... A0A287ARY3 38811722
    803356 8ueo:1I (3.8) BS01 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    803357 8ueo:1I (3.8) BS02 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    803358 8ueo:1O (3.8) BS01 GTP N/A GO:0005737 ... F1SIS9 38811722
    803359 8ueo:1P (3.8) BS01 NDP N/A GO:0005739 ... A0A4X1ULW2 38811722
    803360 8ueo:1R (3.8) BS01 ZN N/A GO:0005739 ... A0A4X1THU2 38811722
    803361 8ueo:1T (3.8) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    803362 8ueo:1U (3.8) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    803363 8ueo:1W (3.8) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    803364 8uep:1B (3.4) BS01 SF4 N/A GO:0046872 ... A0A4X1VVS8 38811722
    803365 8uep:1B (3.4) BS02 U10 N/A GO:0046872 ... A0A4X1VVS8 38811722
    803366 8uep:1D (3.4) BS01 SF4 N/A GO:0051539 ... A0A8D0QM68 38811722
    803367 8uep:1D (3.4) BS02 U10 N/A GO:0051539 ... A0A8D0QM68 38811722
    803368 8uep:1E (3.4) BS01 FES N/A GO:0005739 ... A0A4X1VRV3 38811722
    803369 8uep:1F (3.4) BS01 FMN N/A GO:0005739 ... A0A4X1SZP7 38811722
    803370 8uep:1F (3.4) BS02 SF4 N/A GO:0005739 ... A0A4X1SZP7 38811722
    803371 8uep:1G (3.4) BS01 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    803372 8uep:1G (3.4) BS02 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    803373 8uep:1G (3.4) BS03 FES N/A GO:0005743 ... A0A287ARY3 38811722
    803374 8uep:1H (3.4) BS01 U10 N/A GO:0003954 ... A0A0U1RS44 38811722
    803375 8uep:1I (3.4) BS01 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    803376 8uep:1I (3.4) BS02 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    803377 8uep:1O (3.4) BS01 GTP N/A GO:0005737 ... F1SIS9 38811722
    803378 8uep:1P (3.4) BS01 NDP N/A GO:0005739 ... A0A4X1ULW2 38811722
    803379 8uep:1R (3.4) BS01 ZN N/A GO:0005739 ... A0A4X1THU2 38811722
    803380 8uep:1U (3.4) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    803381 8uep:1W (3.4) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    803382 8ueq:1B (3.4) BS01 SF4 N/A GO:0046872 ... A0A4X1VVS8 38811722
    803383 8ueq:1B (3.4) BS02 U10 N/A GO:0046872 ... A0A4X1VVS8 38811722
    803384 8ueq:1D (3.4) BS01 U10 N/A GO:0051539 ... A0A8D0QM68 38811722
    803385 8ueq:1E (3.4) BS01 FES N/A GO:0005739 ... A0A4X1VRV3 38811722
    803386 8ueq:1F (3.4) BS01 FMN N/A GO:0005739 ... A0A4X1SZP7 38811722
    803387 8ueq:1F (3.4) BS02 SF4 N/A GO:0005739 ... A0A4X1SZP7 38811722
    803388 8ueq:1G (3.4) BS01 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    803389 8ueq:1G (3.4) BS02 SF4 N/A GO:0005743 ... A0A287ARY3 38811722
    803390 8ueq:1G (3.4) BS03 FES N/A GO:0005743 ... A0A287ARY3 38811722
    803391 8ueq:1H (3.4) BS01 U10 N/A GO:0003954 ... A0A0U1RS44 38811722
    803392 8ueq:1I (3.4) BS01 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    803393 8ueq:1I (3.4) BS02 SF4 N/A GO:0003954 ... A0A286ZUN9 38811722
    803394 8ueq:1O (3.4) BS01 GTP N/A GO:0005737 ... F1SIS9 38811722
    803395 8ueq:1P (3.4) BS01 NDP N/A GO:0005739 ... A0A4X1ULW2 38811722
    803396 8ueq:1R (3.4) BS01 ZN N/A GO:0005739 ... A0A4X1THU2 38811722
    803397 8ueq:1T (3.4) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    803398 8ueq:1U (3.4) BS01 EHZ N/A GO:0005739 ... A0A8D1KH26 38811722
    803399 8ueq:1W (3.4) BS01 EHZ N/A GO:0005739 ... A0A480VKQ8 38811722
    803400 8uer:1B (3.5) BS01 SF4 N/A GO:0046872 ... A0A4X1VVS8 38811722
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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