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BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    799401 8tbu:C (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    799402 8tbu:C (2.35) BS04 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    799403 8tbu:D (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    799404 8tbu:D (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    799405 8tbu:D (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    799406 8tbu:E (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    799407 8tbu:E (2.35) BS02 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    799408 8tbu:E (2.35) BS03 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    799409 8tbu:F (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    799410 8tbu:F (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    799411 8tbu:F (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    799412 8tbu:G (2.35) BS01 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    799413 8tbu:G (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    799414 8tbu:G (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    799415 8tbu:G (2.35) BS04 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    799416 8tbu:H (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    799417 8tbu:H (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    799418 8tbu:H (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    799419 8tbx:A (2.71) BS01 ADP 3.6.4.13 GO:0003676 ... Q92499 N/A
    799420 8tbx:A (2.71) BS02 ZN 3.6.4.13 GO:0003676 ... Q92499 N/A
    799421 8tc0:A (1.88) BS01 EIC ? GO:0016020 ... U5WI05 38805567
    799422 8tc0:B (1.88) BS01 FUC ? GO:0016020 ... U5WI05 38805567
    799423 8tc0:B (1.88) BS02 EIC ? GO:0016020 ... U5WI05 38805567
    799424 8tc0:C (1.88) BS01 EIC ? GO:0016020 ... U5WI05 38805567
    799425 8tc1:A (1.92) BS01 EIC ? GO:0016020 ... Q3ZTF3 38805567
    799426 8tc1:B (1.92) BS01 EIC ? GO:0016020 ... Q3ZTF3 38805567
    799427 8tc1:C (1.92) BS01 EIC ? GO:0016020 ... Q3ZTF3 38805567
    799428 8tc3:A (2.57) BS01 SF4 ?
    1.18.6.1    		 GO:0005524 ... P00459
    Q5S3G7    		 38575747
    799429 8tc3:B (2.57) BS01 SF4 ?
    1.18.6.1    		 GO:0005524 ... P00459
    Q5S3G7    		 38575747
    799430 8tc5:A (2.11) BS01 EIC N/A GO:0016020 ... P59594 38805567
    799431 8tc5:B (2.11) BS01 EIC N/A GO:0016020 ... P59594 38805567
    799432 8tc5:C (2.11) BS01 FUC N/A GO:0016020 ... P59594 38805567
    799433 8tc5:C (2.11) BS02 EIC N/A GO:0016020 ... P59594 38805567
    799434 8tc8:A (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    799435 8tc8:B (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    799436 8tc8:C (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    799437 8tc8:D (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    799438 8tc9:A (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    799439 8tc9:B (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    799440 8tc9:C (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    799441 8tc9:D (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    799442 8tcc:A (3.1) BS01 MN N/A GO:0003933 ... A0A069BB45 N/A
    799443 8tcc:A (3.1) BS02 SO3 N/A GO:0003933 ... A0A069BB45 N/A
    799444 8tcc:B (3.1) BS01 ZS9 N/A GO:0003933 ... A0A069BB45 N/A
    799445 8tcc:C (3.1) BS01 ZS9 N/A GO:0003933 ... A0A069BB45 N/A
    799446 8tcc:D (3.1) BS01 ZS9 N/A GO:0003933 ... A0A069BB45 N/A
    799447 8tcd:A (1.9) BS01 CO N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799448 8tcd:B (1.9) BS01 CO N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799449 8tcd:C (1.9) BS01 CO N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799450 8tcd:D (1.9) BS01 CO N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799451 8tcf:A (2.9) BS01 CA ? GO:0007155 ... P06756 37704610
    799452 8tcf:A (2.9) BS02 CA ? GO:0007155 ... P06756 37704610
    799453 8tcf:A (2.9) BS03 CA ? GO:0007155 ... P06756 37704610
    799454 8tcf:A (2.9) BS04 CA ? GO:0007155 ... P06756 37704610
    799455 8tcg:A (3.4) BS01 CA ? GO:0007155 ... P06756 37704610
    799456 8tcg:A (3.4) BS02 CA ? GO:0007155 ... P06756 37704610
    799457 8tcg:A (3.4) BS03 CA ? GO:0007155 ... P06756 37704610
    799458 8tcg:A (3.4) BS04 CA ? GO:0007155 ... P06756 37704610
    799459 8tcr:A (2.08) BS01 CO N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799460 8tcr:A (2.08) BS02 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799461 8tcr:A (2.08) BS03 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799462 8tcr:B (2.08) BS01 CO N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799463 8tcr:B (2.08) BS02 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799464 8tcr:B (2.08) BS03 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799465 8tcr:B (2.08) BS04 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799466 8tcr:C (2.08) BS01 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799467 8tcr:C (2.08) BS02 CO N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799468 8tcr:D (2.08) BS01 CO N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799469 8tcr:D (2.08) BS02 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799470 8tcr:D (2.08) BS03 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799471 8tcr:D (2.08) BS04 GLC N/A GO:0016853 ... A0A9P3ZKE6 38898276
    799472 8tct:A (1.86) BS01 UC6 ? GO:0016853 ... Q8A5T2 38898276
    799473 8tct:A (1.86) BS02 CO ? GO:0016853 ... Q8A5T2 38898276
    799474 8tcu:A (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    799475 8tcu:A (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    799476 8tcu:B (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    799477 8tcu:B (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    799478 8tcu:C (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    799479 8tcu:C (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    799480 8tcu:D (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    799481 8tcu:D (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    799482 8tcu:E (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    799483 8tcv:B (1.74) BS01 ZR0 1.5.1.2 GO:0004735 ... P32322 38411104
    799484 8tcw:A (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    799485 8tcw:A (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    799486 8tcw:B (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    799487 8tcw:B (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    799488 8tcw:C (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    799489 8tcw:C (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    799490 8tcw:D (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    799491 8tcw:D (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    799492 8tcw:E (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    799493 8tcx:A (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    799494 8tcx:A (1.72) BS02 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    799495 8tcx:B (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    799496 8tcx:C (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    799497 8tcx:C (1.72) BS02 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    799498 8tcx:D (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    799499 8tcy:A (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104
    799500 8tcy:B (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104
    799501 8tcy:C (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104
    799502 8tcy:D (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104
    799503 8tcz:A (2.1) BS01 ZRI 1.5.1.2 GO:0004735 ... P32322 38411104
    799504 8tcz:B (2.1) BS01 ZRI 1.5.1.2 GO:0004735 ... P32322 38411104
    799505 8td0:A (2.2) BS01 ZS5 1.5.1.2 GO:0004735 ... P32322 38411104
    799506 8td0:B (2.2) BS01 ZS5 1.5.1.2 GO:0004735 ... P32322 38411104
    799507 8td0:C (2.2) BS01 ZS5 1.5.1.2 GO:0004735 ... P32322 38411104
    799508 8td0:D (2.2) BS01 ZS5 1.5.1.2 GO:0004735 ... P32322 38411104
    799509 8td1:A (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    799510 8td1:A (1.88) BS02 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    799511 8td1:B (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    799512 8td1:B (1.88) BS02 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    799513 8td1:C (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    799514 8td1:C (1.88) BS02 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    799515 8td1:D (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    799516 8td1:D (1.88) BS02 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    799517 8td1:E (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    799518 8td2:A (1.65) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799519 8td2:A (1.65) BS02 ZPS N/A GO:0004735 ... P32322 39133178
    799520 8td2:B (1.65) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799521 8td2:B (1.65) BS02 ZPS N/A GO:0004735 ... P32322 39133178
    799522 8td2:C (1.65) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799523 8td2:C (1.65) BS02 ZPS N/A GO:0004735 ... P32322 39133178
    799524 8td2:D (1.65) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799525 8td2:D (1.65) BS02 ZPS N/A GO:0004735 ... P32322 39133178
    799526 8td2:E (1.65) BS01 ZPS N/A GO:0004735 ... P32322 39133178
    799527 8td3:A (1.67) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799528 8td3:A (1.67) BS02 GJM N/A GO:0004735 ... P32322 39133178
    799529 8td3:A (1.67) BS03 GJM N/A GO:0004735 ... P32322 39133178
    799530 8td3:B (1.67) BS01 GJM N/A GO:0004735 ... P32322 39133178
    799531 8td3:B (1.67) BS02 GJM N/A GO:0004735 ... P32322 39133178
    799532 8td3:B (1.67) BS03 NAI N/A GO:0004735 ... P32322 39133178
    799533 8td3:C (1.67) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799534 8td3:C (1.67) BS02 GJM N/A GO:0004735 ... P32322 39133178
    799535 8td3:C (1.67) BS03 GJM N/A GO:0004735 ... P32322 39133178
    799536 8td3:D (1.67) BS01 GJM N/A GO:0004735 ... P32322 39133178
    799537 8td3:D (1.67) BS02 GJM N/A GO:0004735 ... P32322 39133178
    799538 8td3:D (1.67) BS03 NAI N/A GO:0004735 ... P32322 39133178
    799539 8td3:E (1.67) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799540 8td3:E (1.67) BS02 GJM N/A GO:0004735 ... P32322 39133178
    799541 8td4:A (1.76) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799542 8td4:A (1.76) BS02 UJD N/A GO:0004735 ... P32322 39133178
    799543 8td4:B (1.76) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799544 8td4:B (1.76) BS02 UJD N/A GO:0004735 ... P32322 39133178
    799545 8td4:C (1.76) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799546 8td4:C (1.76) BS02 UJD N/A GO:0004735 ... P32322 39133178
    799547 8td4:C (1.76) BS03 UJD N/A GO:0004735 ... P32322 39133178
    799548 8td4:D (1.76) BS01 UJD N/A GO:0004735 ... P32322 39133178
    799549 8td4:D (1.76) BS02 NAI N/A GO:0004735 ... P32322 39133178
    799550 8td4:D (1.76) BS03 UJD N/A GO:0004735 ... P32322 39133178
    799551 8td4:E (1.76) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799552 8td4:E (1.76) BS02 UJD N/A GO:0004735 ... P32322 39133178
    799553 8td5:A (1.81) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799554 8td5:A (1.81) BS02 UJP N/A GO:0004735 ... P32322 39133178
    799555 8td5:B (1.81) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799556 8td5:B (1.81) BS02 UJP N/A GO:0004735 ... P32322 39133178
    799557 8td5:C (1.81) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799558 8td5:C (1.81) BS02 UJP N/A GO:0004735 ... P32322 39133178
    799559 8td5:D (1.81) BS01 UJP N/A GO:0004735 ... P32322 39133178
    799560 8td5:D (1.81) BS02 NAI N/A GO:0004735 ... P32322 39133178
    799561 8td5:D (1.81) BS03 UJP N/A GO:0004735 ... P32322 39133178
    799562 8td5:E (1.81) BS01 UJP N/A GO:0004735 ... P32322 39133178
    799563 8td6:A (2.08) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799564 8td6:B (2.08) BS01 MTG N/A GO:0004735 ... P32322 39133178
    799565 8td6:B (2.08) BS02 NAI N/A GO:0004735 ... P32322 39133178
    799566 8td6:C (2.08) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799567 8td6:C (2.08) BS02 MTG N/A GO:0004735 ... P32322 39133178
    799568 8td6:C (2.08) BS03 MTG N/A GO:0004735 ... P32322 39133178
    799569 8td6:D (2.08) BS01 MTG N/A GO:0004735 ... P32322 39133178
    799570 8td6:D (2.08) BS02 NAI N/A GO:0004735 ... P32322 39133178
    799571 8td6:D (2.08) BS03 MTG N/A GO:0004735 ... P32322 39133178
    799572 8td6:E (2.08) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799573 8td7:A (1.61) BS01 LHV N/A GO:0004735 ... P32322 39133178
    799574 8td7:B (1.61) BS01 LHV N/A GO:0004735 ... P32322 39133178
    799575 8td7:B (1.61) BS02 LHV N/A GO:0004735 ... P32322 39133178
    799576 8td7:C (1.61) BS01 LHV N/A GO:0004735 ... P32322 39133178
    799577 8td7:D (1.61) BS01 LHV N/A GO:0004735 ... P32322 39133178
    799578 8td7:E (1.61) BS01 LHV N/A GO:0004735 ... P32322 39133178
    799579 8td8:A (1.71) BS01 G8I N/A GO:0004735 ... P32322 39133178
    799580 8td8:A (1.71) BS02 NAI N/A GO:0004735 ... P32322 39133178
    799581 8td8:B (1.71) BS01 G8I N/A GO:0004735 ... P32322 39133178
    799582 8td8:B (1.71) BS02 NAI N/A GO:0004735 ... P32322 39133178
    799583 8td8:C (1.71) BS01 G8I N/A GO:0004735 ... P32322 39133178
    799584 8td8:C (1.71) BS02 NAI N/A GO:0004735 ... P32322 39133178
    799585 8td8:C (1.71) BS03 G8I N/A GO:0004735 ... P32322 39133178
    799586 8td8:D (1.71) BS01 G8I N/A GO:0004735 ... P32322 39133178
    799587 8td8:D (1.71) BS02 NAI N/A GO:0004735 ... P32322 39133178
    799588 8td8:E (1.71) BS01 G8I N/A GO:0004735 ... P32322 39133178
    799589 8td9:A (1.75) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799590 8td9:A (1.75) BS02 YCP N/A GO:0004735 ... P32322 39133178
    799591 8td9:A (1.75) BS03 YCP N/A GO:0004735 ... P32322 39133178
    799592 8td9:B (1.75) BS01 YCP N/A GO:0004735 ... P32322 39133178
    799593 8td9:B (1.75) BS02 NAI N/A GO:0004735 ... P32322 39133178
    799594 8td9:B (1.75) BS03 YCP N/A GO:0004735 ... P32322 39133178
    799595 8td9:C (1.75) BS01 NAI N/A GO:0004735 ... P32322 39133178
    799596 8td9:C (1.75) BS02 YCP N/A GO:0004735 ... P32322 39133178
    799597 8td9:C (1.75) BS03 YCP N/A GO:0004735 ... P32322 39133178
    799598 8td9:D (1.75) BS01 YCP N/A GO:0004735 ... P32322 39133178
    799599 8td9:D (1.75) BS02 NAI N/A GO:0004735 ... P32322 39133178
    799600 8td9:D (1.75) BS03 YCP N/A GO:0004735 ... P32322 39133178
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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