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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    794201 8sf7:EL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794202 8sf7:EM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794203 8sf7:EN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794204 8sf7:FA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794205 8sf7:FB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794206 8sf7:FC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794207 8sf7:FD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794208 8sf7:FE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794209 8sf7:FF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794210 8sf7:FG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794211 8sf7:FH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794212 8sf7:FI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794213 8sf7:FJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794214 8sf7:FK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794215 8sf7:FL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794216 8sf7:FM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794217 8sf7:FN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794218 8sf7:GA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794219 8sf7:GB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794220 8sf7:GC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794221 8sf7:GD (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794222 8sf7:GD (4.1) BS02 MG ? GO:0000226 ... P41352 38598282
    794223 8sf7:GD (4.1) BS03 GDP ? GO:0000226 ... P41352 38598282
    794224 8sf7:GE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794225 8sf7:GF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794226 8sf7:GG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794227 8sf7:GH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794228 8sf7:GI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794229 8sf7:GJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794230 8sf7:GK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794231 8sf7:GL (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794232 8sf7:GL (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794233 8sf7:GM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794234 8sf7:GN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794235 8sf7:HA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794236 8sf7:HB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794237 8sf7:HC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794238 8sf7:HD (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794239 8sf7:HD (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794240 8sf7:HE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794241 8sf7:HF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794242 8sf7:HG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794243 8sf7:HH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794244 8sf7:HI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794245 8sf7:HJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794246 8sf7:HK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794247 8sf7:HL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794248 8sf7:HM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794249 8sf7:HN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794250 8sf7:IA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794251 8sf7:IB (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794252 8sf7:IB (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794253 8sf7:IC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794254 8sf7:ID (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794255 8sf7:ID (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794256 8sf7:IE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794257 8sf7:IF (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794258 8sf7:IF (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794259 8sf7:IG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794260 8sf7:IH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794261 8sf7:II (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794262 8sf7:IJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794263 8sf7:IK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794264 8sf7:IL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794265 8sf7:IM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794266 8sf7:IN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794267 8sf7:JA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794268 8sf7:JA (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794269 8sf7:JB (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794270 8sf7:JB (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794271 8sf7:JC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794272 8sf7:JC (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794273 8sf7:JD (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794274 8sf7:JD (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794275 8sf7:JE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794276 8sf7:JE (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794277 8sf7:JF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794278 8sf7:JG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794279 8sf7:JG (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794280 8sf7:JH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794281 8sf7:JI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794282 8sf7:JI (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794283 8sf7:JJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794284 8sf7:JK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794285 8sf7:JL (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794286 8sf7:JL (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794287 8sf7:JM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794288 8sf7:JM (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794289 8sf7:JN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794290 8sf7:KA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794291 8sf7:KB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794292 8sf7:KC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794293 8sf7:KD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794294 8sf7:KE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794295 8sf7:KF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794296 8sf7:KG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794297 8sf7:KH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794298 8sf7:KI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794299 8sf7:KJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794300 8sf7:KK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794301 8sf7:KL (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794302 8sf7:KL (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794303 8sf7:KM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794304 8sf7:KN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794305 8sf7:LA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794306 8sf7:LB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794307 8sf7:LC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794308 8sf7:LC (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794309 8sf7:LD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794310 8sf7:LE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794311 8sf7:LF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794312 8sf7:LG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794313 8sf7:LG (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794314 8sf7:LH (4.1) BS01 MG ? GO:0000226 ... P41352 38598282
    794315 8sf7:LH (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794316 8sf7:LI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794317 8sf7:LJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794318 8sf7:LK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794319 8sf7:LK (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794320 8sf7:LL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794321 8sf7:LM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794322 8sf7:LN (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794323 8sf7:LN (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794324 8sf7:MA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794325 8sf7:MB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794326 8sf7:MC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794327 8sf7:MD (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794328 8sf7:MD (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794329 8sf7:ME (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794330 8sf7:MF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794331 8sf7:MG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794332 8sf7:MH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794333 8sf7:MI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794334 8sf7:MJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794335 8sf7:MK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794336 8sf7:ML (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794337 8sf7:MM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794338 8sf7:MN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794339 8sf7:NA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794340 8sf7:NB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794341 8sf7:NC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794342 8sf7:NC (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794343 8sf7:ND (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794344 8sf7:ND (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794345 8sf7:NE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794346 8sf7:NF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794347 8sf7:NG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794348 8sf7:NG (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794349 8sf7:NH (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794350 8sf7:NH (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794351 8sf7:NI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794352 8sf7:NJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794353 8sf7:NK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794354 8sf7:NK (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794355 8sf7:NL (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794356 8sf7:NL (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794357 8sf7:NM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794358 8sf7:NN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794359 8sf7:OA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794360 8sf7:OA (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794361 8sf7:OB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794362 8sf7:OC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794363 8sf7:OD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794364 8sf7:OE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794365 8sf7:OF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794366 8sf7:OG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794367 8sf7:OH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794368 8sf7:OI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794369 8sf7:OI (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794370 8sf7:OJ (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794371 8sf7:OK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794372 8sf7:OL (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794373 8sf7:OL (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794374 8sf7:OM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794375 8sf7:ON (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794376 8sf7:PA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794377 8sf7:PA (4.1) BS02 GDP 3.6.5.- GO:0000226 ... P41351 38598282
    794378 8sf7:PB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794379 8sf7:PC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794380 8sf7:PD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794381 8sf7:PE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794382 8sf7:PF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794383 8sf7:PG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794384 8sf7:PH (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794385 8sf7:PI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794386 8sf7:PJ (4.1) BS01 GTP ? GO:0000226 ... P41352 38598282
    794387 8sf7:PJ (4.1) BS02 GDP ? GO:0000226 ... P41352 38598282
    794388 8sf7:PK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794389 8sf7:PL (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794390 8sf7:PM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794391 8sf7:PN (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794392 8sf7:QA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794393 8sf7:QB (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794394 8sf7:QB (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    794395 8sf7:QC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794396 8sf7:QC (4.1) BS02 MG 3.6.5.- GO:0000226 ... P41351 38598282
    794397 8sf7:QD (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794398 8sf7:QE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... P41351 38598282
    794399 8sf7:QF (4.1) BS01 GDP ? GO:0000226 ... P41352 38598282
    794400 8sf7:QF (4.1) BS02 GTP ? GO:0000226 ... P41352 38598282
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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