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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    827401 8wdu:Q (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    827402 8wdu:Q (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    827403 8wdu:Q (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    827404 8wdu:Q (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    827405 8wdu:Q (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    827406 8wdu:R (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    827407 8wdu:R (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    827408 8wdu:R (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    827409 8wdu:S (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    827410 8wdu:S (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    827411 8wdu:S (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    827412 8wdu:S (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    827413 8wdu:S (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    827414 8wdu:S (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    827415 8wdu:T (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    827416 8wdu:T (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    827417 8wdu:T (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    827418 8wdu:U (2.24) BS01 UQ8 ? GO:0005886 ... D3RP74 38347078
    827419 8wdu:U (2.24) BS02 CRT ? GO:0005886 ... D3RP74 38347078
    827420 8wdu:U (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    827421 8wdu:U (2.24) BS04 CA ? GO:0005886 ... D3RP74 38347078
    827422 8wdu:U (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    827423 8wdu:U (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    827424 8wdu:U (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    827425 8wdu:V (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    827426 8wdu:V (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    827427 8wdu:V (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    827428 8wdu:W (2.24) BS01 UQ8 ? GO:0005886 ... D3RP74 38347078
    827429 8wdu:W (2.24) BS02 CRT ? GO:0005886 ... D3RP74 38347078
    827430 8wdu:W (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    827431 8wdu:W (2.24) BS04 CA ? GO:0005886 ... D3RP74 38347078
    827432 8wdu:W (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    827433 8wdu:W (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    827434 8wdu:W (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    827435 8wdu:X (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    827436 8wdu:X (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    827437 8wdu:X (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    827438 8wdu:Y (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    827439 8wdu:Y (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    827440 8wdu:Y (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    827441 8wdu:Y (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    827442 8wdu:Y (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    827443 8wdu:Y (2.24) BS06 BCL ? GO:0005886 ... D3RP74 38347078
    827444 8wdu:Y (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    827445 8wdu:Z (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    827446 8wdu:Z (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    827447 8wdu:Z (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    827448 8wdv:0 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    827449 8wdv:0 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    827450 8wdv:0 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    827451 8wdv:1 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    827452 8wdv:1 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    827453 8wdv:1 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    827454 8wdv:1 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    827455 8wdv:1 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    827456 8wdv:2 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    827457 8wdv:2 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    827458 8wdv:2 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    827459 8wdv:3 (2.24) BS01 CRT ? GO:0005886 ... D3RP67 38347078
    827460 8wdv:3 (2.24) BS02 BCL ? GO:0005886 ... D3RP67 38347078
    827461 8wdv:3 (2.24) BS03 BCL ? GO:0005886 ... D3RP67 38347078
    827462 8wdv:3 (2.24) BS04 CRT ? GO:0005886 ... D3RP67 38347078
    827463 8wdv:3 (2.24) BS05 BCL ? GO:0005886 ... D3RP67 38347078
    827464 8wdv:4 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    827465 8wdv:4 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    827466 8wdv:4 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    827467 8wdv:5 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    827468 8wdv:5 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    827469 8wdv:5 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    827470 8wdv:5 (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    827471 8wdv:6 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    827472 8wdv:6 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    827473 8wdv:6 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    827474 8wdv:7 (2.24) BS01 UQ8 ? GO:0005886 ... D3RP69 38347078
    827475 8wdv:7 (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    827476 8wdv:7 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    827477 8wdv:7 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    827478 8wdv:7 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    827479 8wdv:7 (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    827480 8wdv:8 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    827481 8wdv:8 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    827482 8wdv:8 (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    827483 8wdv:9 (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    827484 8wdv:9 (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    827485 8wdv:9 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    827486 8wdv:9 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    827487 8wdv:9 (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    827488 8wdv:A (2.24) BS01 BCL ? GO:0005886 ... D3RP69 38347078
    827489 8wdv:A (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    827490 8wdv:A (2.24) BS03 CRT ? GO:0005886 ... D3RP69 38347078
    827491 8wdv:A (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    827492 8wdv:A (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    827493 8wdv:B (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    827494 8wdv:B (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    827495 8wdv:B (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    827496 8wdv:C (2.24) BS01 HEM ? GO:0005506 ... O82947 38347078
    827497 8wdv:C (2.24) BS02 HEM ? GO:0005506 ... O82947 38347078
    827498 8wdv:C (2.24) BS03 HEM ? GO:0005506 ... O82947 38347078
    827499 8wdv:C (2.24) BS04 HEM ? GO:0005506 ... O82947 38347078
    827500 8wdv:C (2.24) BS05 MG ? GO:0005506 ... O82947 38347078
    827501 8wdv:C (2.24) BS06 Z41 ? GO:0005506 ... O82947 38347078
    827502 8wdv:D (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    827503 8wdv:D (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    827504 8wdv:D (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    827505 8wdv:D (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    827506 8wdv:D (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    827507 8wdv:D (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    827508 8wdv:E (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    827509 8wdv:E (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    827510 8wdv:E (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    827511 8wdv:F (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    827512 8wdv:F (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    827513 8wdv:F (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    827514 8wdv:F (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    827515 8wdv:F (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    827516 8wdv:F (2.24) BS06 BCL ? GO:0005886 ... D3RP74 38347078
    827517 8wdv:F (2.24) BS07 CRT ? GO:0005886 ... D3RP74 38347078
    827518 8wdv:G (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    827519 8wdv:G (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    827520 8wdv:G (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    827521 8wdv:I (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    827522 8wdv:I (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    827523 8wdv:I (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    827524 8wdv:I (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    827525 8wdv:I (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    827526 8wdv:I (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    827527 8wdv:J (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    827528 8wdv:J (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    827529 8wdv:J (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    827530 8wdv:K (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    827531 8wdv:K (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    827532 8wdv:K (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    827533 8wdv:K (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    827534 8wdv:K (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    827535 8wdv:K (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    827536 8wdv:L (2.24) BS01 Z41 ? GO:0009772 ... P51762 38347078
    827537 8wdv:L (2.24) BS02 BCL ? GO:0009772 ... P51762 38347078
    827538 8wdv:L (2.24) BS03 BPH ? GO:0009772 ... P51762 38347078
    827539 8wdv:L (2.24) BS04 UQ8 ? GO:0009772 ... P51762 38347078
    827540 8wdv:L (2.24) BS05 UQ8 ? GO:0009772 ... P51762 38347078
    827541 8wdv:L (2.24) BS06 BCL ? GO:0009772 ... P51762 38347078
    827542 8wdv:L (2.24) BS07 UQ8 ? GO:0009772 ... P51762 38347078
    827543 8wdv:L (2.24) BS08 FE ? GO:0009772 ... P51762 38347078
    827544 8wdv:L (2.24) BS09 BCL ? GO:0009772 ... P51762 38347078
    827545 8wdv:L (2.24) BS10 BPH ? GO:0009772 ... P51762 38347078
    827546 8wdv:L (2.24) BS11 MQ8 ? GO:0009772 ... P51762 38347078
    827547 8wdv:M (2.24) BS01 BPH ? GO:0009772 ... P51763 38347078
    827548 8wdv:M (2.24) BS02 BCL ? GO:0009772 ... P51763 38347078
    827549 8wdv:M (2.24) BS03 UQ8 ? GO:0009772 ... P51763 38347078
    827550 8wdv:M (2.24) BS04 FE ? GO:0009772 ... P51763 38347078
    827551 8wdv:M (2.24) BS05 BCL ? GO:0009772 ... P51763 38347078
    827552 8wdv:M (2.24) BS06 BCL ? GO:0009772 ... P51763 38347078
    827553 8wdv:M (2.24) BS07 BPH ? GO:0009772 ... P51763 38347078
    827554 8wdv:M (2.24) BS08 MQ8 ? GO:0009772 ... P51763 38347078
    827555 8wdv:M (2.24) BS09 CRT ? GO:0009772 ... P51763 38347078
    827556 8wdv:N (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    827557 8wdv:N (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    827558 8wdv:N (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    827559 8wdv:O (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    827560 8wdv:O (2.24) BS02 CRT ? GO:0005886 ... D3RP69 38347078
    827561 8wdv:O (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    827562 8wdv:O (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    827563 8wdv:O (2.24) BS05 CRT ? GO:0005886 ... D3RP69 38347078
    827564 8wdv:O (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    827565 8wdv:P (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    827566 8wdv:P (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    827567 8wdv:P (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    827568 8wdv:Q (2.24) BS01 CRT ? GO:0005886 ... D3RP69 38347078
    827569 8wdv:Q (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    827570 8wdv:Q (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    827571 8wdv:Q (2.24) BS04 CRT ? GO:0005886 ... D3RP69 38347078
    827572 8wdv:Q (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    827573 8wdv:Q (2.24) BS06 CRT ? GO:0005886 ... D3RP69 38347078
    827574 8wdv:R (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    827575 8wdv:R (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    827576 8wdv:R (2.24) BS03 CRT ? GO:0005886 ... D3RP75 38347078
    827577 8wdv:S (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    827578 8wdv:S (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    827579 8wdv:S (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    827580 8wdv:S (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    827581 8wdv:S (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    827582 8wdv:S (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    827583 8wdv:T (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    827584 8wdv:T (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    827585 8wdv:T (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    827586 8wdv:U (2.24) BS01 CRT ? GO:0005886 ... D3RP74 38347078
    827587 8wdv:U (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    827588 8wdv:U (2.24) BS03 CA ? GO:0005886 ... D3RP74 38347078
    827589 8wdv:U (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    827590 8wdv:U (2.24) BS05 CRT ? GO:0005886 ... D3RP74 38347078
    827591 8wdv:U (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    827592 8wdv:V (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    827593 8wdv:V (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    827594 8wdv:V (2.24) BS03 CRT ? GO:0005886 ... D3RP68 38347078
    827595 8wdv:W (2.24) BS01 UQ8 ? GO:0005886 ... D3RP74 38347078
    827596 8wdv:W (2.24) BS02 CRT ? GO:0005886 ... D3RP74 38347078
    827597 8wdv:W (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    827598 8wdv:W (2.24) BS04 CA ? GO:0005886 ... D3RP74 38347078
    827599 8wdv:W (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    827600 8wdv:W (2.24) BS06 CRT ? GO:0005886 ... D3RP74 38347078
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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