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BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    818001 8tf3:D (2.94) BS06 ERG ? GO:0005216 ... Q9XSM3 38141613
    818002 8tf3:D (2.94) BS07 ERG ? GO:0005216 ... Q9XSM3 38141613
    818003 8tf3:D (2.94) BS08 CPL ? GO:0005216 ... Q9XSM3 38141613
    818004 8tf3:D (2.94) BS09 ECN ? GO:0005216 ... Q9XSM3 38141613
    818005 8tf4:A (2.86) BS01 ERG ? GO:0005216 ... Q9XSM3 38141613
    818006 8tf4:A (2.86) BS02 ERG ? GO:0005216 ... Q9XSM3 38141613
    818007 8tf4:A (2.86) BS03 CPL ? GO:0005216 ... Q9XSM3 38141613
    818008 8tf4:A (2.86) BS04 ECN ? GO:0005216 ... Q9XSM3 38141613
    818009 8tf4:A (2.86) BS05 CPL ? GO:0005216 ... Q9XSM3 38141613
    818010 8tf4:A (2.86) BS06 CPL ? GO:0005216 ... Q9XSM3 38141613
    818011 8tf4:A (2.86) BS07 ERG ? GO:0005216 ... Q9XSM3 38141613
    818012 8tf4:A (2.86) BS08 ERG ? GO:0005216 ... Q9XSM3 38141613
    818013 8tf4:A (2.86) BS09 ECN ? GO:0005216 ... Q9XSM3 38141613
    818014 8tf4:B (2.86) BS01 CPL ? GO:0005216 ... Q9XSM3 38141613
    818015 8tf4:B (2.86) BS02 ERG ? GO:0005216 ... Q9XSM3 38141613
    818016 8tf4:B (2.86) BS03 ERG ? GO:0005216 ... Q9XSM3 38141613
    818017 8tf4:B (2.86) BS04 CPL ? GO:0005216 ... Q9XSM3 38141613
    818018 8tf4:B (2.86) BS05 ECN ? GO:0005216 ... Q9XSM3 38141613
    818019 8tf4:B (2.86) BS06 CPL ? GO:0005216 ... Q9XSM3 38141613
    818020 8tf4:B (2.86) BS07 ERG ? GO:0005216 ... Q9XSM3 38141613
    818021 8tf4:B (2.86) BS08 ERG ? GO:0005216 ... Q9XSM3 38141613
    818022 8tf4:B (2.86) BS09 ECN ? GO:0005216 ... Q9XSM3 38141613
    818023 8tf4:C (2.86) BS01 CPL ? GO:0005216 ... Q9XSM3 38141613
    818024 8tf4:C (2.86) BS02 ERG ? GO:0005216 ... Q9XSM3 38141613
    818025 8tf4:C (2.86) BS03 ERG ? GO:0005216 ... Q9XSM3 38141613
    818026 8tf4:C (2.86) BS04 CPL ? GO:0005216 ... Q9XSM3 38141613
    818027 8tf4:C (2.86) BS05 ECN ? GO:0005216 ... Q9XSM3 38141613
    818028 8tf4:C (2.86) BS06 CPL ? GO:0005216 ... Q9XSM3 38141613
    818029 8tf4:C (2.86) BS07 ERG ? GO:0005216 ... Q9XSM3 38141613
    818030 8tf4:C (2.86) BS08 ERG ? GO:0005216 ... Q9XSM3 38141613
    818031 8tf4:C (2.86) BS09 ECN ? GO:0005216 ... Q9XSM3 38141613
    818032 8tf4:D (2.86) BS01 ERG ? GO:0005216 ... Q9XSM3 38141613
    818033 8tf4:D (2.86) BS02 ERG ? GO:0005216 ... Q9XSM3 38141613
    818034 8tf4:D (2.86) BS03 ECN ? GO:0005216 ... Q9XSM3 38141613
    818035 8tf4:D (2.86) BS04 CPL ? GO:0005216 ... Q9XSM3 38141613
    818036 8tf4:D (2.86) BS05 CPL ? GO:0005216 ... Q9XSM3 38141613
    818037 8tf4:D (2.86) BS06 ERG ? GO:0005216 ... Q9XSM3 38141613
    818038 8tf4:D (2.86) BS07 ERG ? GO:0005216 ... Q9XSM3 38141613
    818039 8tf4:D (2.86) BS08 CPL ? GO:0005216 ... Q9XSM3 38141613
    818040 8tf4:D (2.86) BS09 ECN ? GO:0005216 ... Q9XSM3 38141613
    818041 8tf9:A (1.55) BS01 I7P 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    818042 8tf9:A (1.55) BS02 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    818043 8tf9:A (1.55) BS03 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    818044 8tfa:A (1.4) BS01 U6J 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    818045 8tfa:A (1.4) BS02 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    818046 8tfa:A (1.4) BS03 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    818047 8tfb:A (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818048 8tfb:B (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818049 8tfb:C (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818050 8tfb:D (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818051 8tfb:L (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818052 8tfb:M (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818053 8tfb:O (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818054 8tfb:P (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818055 8tfb:Q (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818056 8tfb:V (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818057 8tfb:X (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818058 8tfb:Y (2.99) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818059 8tff:A (2.34) BS01 CA ? GO:0000160 ... A5FFU4 N/A
    818060 8tff:A (2.34) BS02 CA ? GO:0000160 ... A5FFU4 N/A
    818061 8tff:A (2.34) BS03 CA ? GO:0000160 ... A5FFU4 N/A
    818062 8tff:A (2.34) BS04 BEF ? GO:0000160 ... A5FFU4 N/A
    818063 8tff:B (2.34) BS01 CA ? GO:0000160 ... A5FFU4 N/A
    818064 8tff:B (2.34) BS02 CA ? GO:0000160 ... A5FFU4 N/A
    818065 8tff:B (2.34) BS03 CA ? GO:0000160 ... A5FFU4 N/A
    818066 8tff:B (2.34) BS04 BEF ? GO:0000160 ... A5FFU4 N/A
    818067 8tff:B (2.34) BS05 BEF ? GO:0000160 ... A5FFU4 N/A
    818068 8tfk:A (2.66) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818069 8tfk:A (2.66) BS02 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818070 8tfk:A (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818071 8tfk:A (2.66) BS04 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818072 8tfk:A (2.66) BS05 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818073 8tfk:B (2.66) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818074 8tfk:B (2.66) BS02 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818075 8tfk:B (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818076 8tfk:B (2.66) BS04 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818077 8tfk:B (2.66) BS05 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818078 8tfk:C (2.66) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818079 8tfk:C (2.66) BS02 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818080 8tfk:C (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818081 8tfk:C (2.66) BS04 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818082 8tfk:C (2.66) BS05 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818083 8tfk:D (2.66) BS01 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818084 8tfk:D (2.66) BS02 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818085 8tfk:D (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818086 8tfk:D (2.66) BS04 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818087 8tfk:D (2.66) BS05 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818088 8tfk:E (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818089 8tfk:E (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818090 8tfk:E (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818091 8tfk:E (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818092 8tfk:E (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818093 8tfk:F (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818094 8tfk:F (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818095 8tfk:F (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818096 8tfk:F (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818097 8tfk:F (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818098 8tfk:G (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818099 8tfk:G (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818100 8tfk:G (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818101 8tfk:G (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818102 8tfk:G (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818103 8tfk:H (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818104 8tfk:H (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818105 8tfk:H (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818106 8tfk:H (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818107 8tfk:H (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818108 8tfk:I (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818109 8tfk:I (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818110 8tfk:I (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818111 8tfk:I (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818112 8tfk:I (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818113 8tfk:J (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818114 8tfk:J (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818115 8tfk:J (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818116 8tfk:J (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818117 8tfk:J (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818118 8tfk:K (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818119 8tfk:K (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818120 8tfk:K (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818121 8tfk:K (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818122 8tfk:L (2.66) BS01 P3S 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818123 8tfk:L (2.66) BS02 ADP 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818124 8tfk:L (2.66) BS03 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818125 8tfk:L (2.66) BS04 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818126 8tfk:L (2.66) BS05 MG 6.3.1.2 GO:0003824 ... Q8PY99 37968329
    818127 8tfm:A (2.72) BS01 ZN ? GO:0000160 ... A5FFU4 N/A
    818128 8tfm:A (2.72) BS02 ZN ? GO:0000160 ... A5FFU4 N/A
    818129 8tfm:A (2.72) BS03 ZN ? GO:0000160 ... A5FFU4 N/A
    818130 8tfm:B (2.72) BS01 ZN ? GO:0000160 ... A5FFU4 N/A
    818131 8tfm:B (2.72) BS02 ZN ? GO:0000160 ... A5FFU4 N/A
    818132 8tfm:B (2.72) BS03 ZN ? GO:0000160 ... A5FFU4 N/A
    818133 8tfo:A (2.0) BS01 MEV 2.7.1.36 GO:0004496 ... A0A1D1VW28 38411551
    818134 8tfo:B (2.0) BS01 MEV 2.7.1.36 GO:0004496 ... A0A1D1VW28 38411551
    818135 8tfu:A (1.482) BS01 peptide ? N/A P03698 38663547
    818136 8tfu:A (1.482) BS02 peptide ? N/A P03698 38663547
    818137 8tfu:B (1.482) BS01 peptide ? N/A P03698 38663547
    818138 8tfu:B (1.482) BS02 peptide ? N/A P03698 38663547
    818139 8tfx:A (1.7) BS01 A2P 2.7.1.- GO:0000215 ... O57899 37883434
    818140 8tfy:A (1.54) BS01 NAP 2.7.1.- GO:0000215 ... O57899 37883434
    818141 8tfz:A (2.06) BS01 NAD 2.7.1.- GO:0000215 ... O57899 37883434
    818142 8tfz:B (2.06) BS01 NAD 2.7.1.- GO:0000215 ... O57899 37883434
    818143 8tg3:A (1.47) BS01 HQG 2.7.1.- GO:0003950 ... Q9YFP5 37883434
    818144 8tg4:A (1.37) BS01 rna 2.7.1.- GO:0003950 ... Q9YFP5 37883434
    818145 8tg4:A (1.37) BS02 9SO 2.7.1.- GO:0003950 ... Q9YFP5 37883434
    818146 8tg5:A (2.0) BS01 9S2 2.7.1.- GO:0000215 ... O57899 37883434
    818147 8tg7:A (1.775) BS01 peptide ? N/A P03698 38663547
    818148 8tg7:A (1.775) BS02 peptide ? N/A P03698 38663547
    818149 8tg7:B (1.775) BS01 peptide ? N/A P03698 38663547
    818150 8tg7:B (1.775) BS02 peptide ? N/A P03698 38663547
    818151 8tg8:A (1.576) BS01 peptide ? N/A P03698 38663547
    818152 8tgb:A (1.55) BS01 HEM ? GO:0020037 ... Q84YL2 38041394
    818153 8tgb:B (1.55) BS01 HEM ? GO:0020037 ... Q84YL2 38041394
    818154 8tgc:A (1.484) BS01 peptide ? N/A P03698 38663547
    818155 8tgc:A (1.484) BS02 peptide ? N/A P03698 38663547
    818156 8tgc:B (1.484) BS01 peptide ? N/A P03698 38663547
    818157 8tgc:B (1.484) BS02 peptide ? N/A P03698 38663547
    818158 8tgd:A (2.928) BS01 X3N 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    818159 8tgd:A (2.928) BS02 ZWE 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    818160 8tgd:C (2.928) BS01 X3N 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    818161 8tgd:C (2.928) BS02 ZWE 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    818162 8tgg:A (3.6) BS01 WRF ? GO:0005335 ... P54219 38499039
    818163 8tgg:B (3.6) BS01 YHR ? GO:0005335 ... P54219 38499039
    818164 8tgh:A (3.5) BS01 1WE ? GO:0005335 ... P54219 38499039
    818165 8tgh:B (3.5) BS01 YHR ? GO:0005335 ... P54219 38499039
    818166 8tgi:A (3.4) BS01 LDP ? GO:0005335 ... P54219 38499039
    818167 8tgi:B (3.4) BS01 YHR ? GO:0005335 ... P54219 38499039
    818168 8tgj:B (3.5) BS01 YHR ? GO:0005335 ... P54219 38499039
    818169 8tgk:A (3.7) BS01 HSM ? GO:0005335 ... P54219 38499039
    818170 8tgk:B (3.7) BS01 YHR ? GO:0005335 ... P54219 38499039
    818171 8tgl:B (3.4) BS01 YHR ? GO:0005335 ... P54219 38499039
    818172 8tgm:A (3.5) BS01 YHR ? GO:0005335 ... P54219 38499039
    818173 8tgm:B (3.5) BS01 YHR ? GO:0005335 ... P54219 38499039
    818174 8tgn:A (3.3) BS01 SRO ? GO:0005335 ... P54219 38499039
    818175 8tgn:B (3.3) BS01 YHR ? GO:0005335 ... P54219 38499039
    818176 8tgp:A (1.76) BS01 peptide 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 37966275
    818177 8tgp:A (1.76) BS02 ZN 2.3.1.-
    2.3.1.286
    GO:0017136 ... Q8IXJ6 37966275
    818178 8tgy:A (2.18) BS01 9U1 ? GO:0005886 ... U2EQ00 37645731
    818179 8tgy:E (2.18) BS01 9U1 ? GO:0005886 ... U2EQ00 37645731
    818180 8th1:A (1.8) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818181 8th1:B (1.8) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818182 8th1:C (1.8) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818183 8th1:D (1.8) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818184 8th3:A (3.0) BS01 Y01 ? GO:0042597 ... P0ABE7
    P30556
    38744986
    818185 8th3:A (3.0) BS02 Y01 ? GO:0042597 ... P0ABE7
    P30556
    38744986
    818186 8th4:A (3.3) BS01 LSN ? GO:0042597 ... P0ABE7
    P30556
    38744986
    818187 8th5:A (2.62) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818188 8th5:A (2.62) BS02 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818189 8th5:B (2.62) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818190 8th5:C (2.62) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818191 8th5:C (2.62) BS02 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818192 8th5:C (2.62) BS03 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818193 8th5:D (2.62) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818194 8th5:E (2.62) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818195 8th5:E (2.62) BS02 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818196 8th5:F (2.62) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818197 8th5:I (2.62) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818198 8th6:A (2.34) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818199 8th6:B (2.34) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217
    818200 8th6:C (2.34) BS01 peptide 3.6.4.12
    3.6.4.13
    N/A Q13283 38492217

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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