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BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    817601 8tbp:D (3.12621) BS01 peptide ? GO:0006955 ... P01911 38321013
    817602 8tbs:A (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817603 8tbs:A (2.35) BS02 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817604 8tbs:A (2.35) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817605 8tbs:A (2.35) BS04 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    817606 8tbs:B (2.35) BS01 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    817607 8tbs:B (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817608 8tbs:B (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817609 8tbs:B (2.35) BS04 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817610 8tbs:C (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817611 8tbs:C (2.35) BS02 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817612 8tbs:C (2.35) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817613 8tbs:C (2.35) BS04 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    817614 8tbs:D (2.35) BS01 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    817615 8tbs:D (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817616 8tbs:D (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817617 8tbs:D (2.35) BS04 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817618 8tbs:E (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817619 8tbs:E (2.35) BS02 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817620 8tbs:E (2.35) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817621 8tbs:E (2.35) BS04 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    817622 8tbs:F (2.35) BS01 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    817623 8tbs:F (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817624 8tbs:F (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817625 8tbs:F (2.35) BS04 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817626 8tbs:G (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817627 8tbs:G (2.35) BS02 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817628 8tbs:G (2.35) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817629 8tbs:G (2.35) BS04 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    817630 8tbs:H (2.35) BS01 HVI 2.7.1.40 GO:0000287 ... P30613 38109501
    817631 8tbs:H (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817632 8tbs:H (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817633 8tbs:H (2.35) BS04 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817634 8tbt:A (2.34) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817635 8tbt:A (2.34) BS02 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817636 8tbt:A (2.34) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817637 8tbt:A (2.34) BS04 I07 2.7.1.40 GO:0000287 ... P30613 38109501
    817638 8tbt:B (2.34) BS01 I07 2.7.1.40 GO:0000287 ... P30613 38109501
    817639 8tbt:B (2.34) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817640 8tbt:B (2.34) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817641 8tbt:B (2.34) BS04 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817642 8tbt:C (2.34) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817643 8tbt:C (2.34) BS02 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817644 8tbt:C (2.34) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817645 8tbt:C (2.34) BS04 I07 2.7.1.40 GO:0000287 ... P30613 38109501
    817646 8tbt:D (2.34) BS01 I07 2.7.1.40 GO:0000287 ... P30613 38109501
    817647 8tbt:D (2.34) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817648 8tbt:D (2.34) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817649 8tbt:D (2.34) BS04 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817650 8tbu:A (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    817651 8tbu:A (2.35) BS02 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817652 8tbu:A (2.35) BS03 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817653 8tbu:A (2.35) BS04 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817654 8tbu:B (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    817655 8tbu:B (2.35) BS02 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817656 8tbu:B (2.35) BS03 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817657 8tbu:B (2.35) BS04 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817658 8tbu:C (2.35) BS01 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817659 8tbu:C (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817660 8tbu:C (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817661 8tbu:C (2.35) BS04 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    817662 8tbu:D (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    817663 8tbu:D (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817664 8tbu:D (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817665 8tbu:E (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817666 8tbu:E (2.35) BS02 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817667 8tbu:E (2.35) BS03 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    817668 8tbu:F (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    817669 8tbu:F (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817670 8tbu:F (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817671 8tbu:G (2.35) BS01 PYR 2.7.1.40 GO:0000287 ... P30613 38109501
    817672 8tbu:G (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817673 8tbu:G (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817674 8tbu:G (2.35) BS04 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    817675 8tbu:H (2.35) BS01 I0R 2.7.1.40 GO:0000287 ... P30613 38109501
    817676 8tbu:H (2.35) BS02 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    817677 8tbu:H (2.35) BS03 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    817678 8tbv:A (2.64) BS01 peptide ? N/A Q53Z42 38113889
    817679 8tbv:D (2.64) BS01 peptide ? N/A Q53Z42 38113889
    817680 8tbw:A (2.081) BS01 peptide ? N/A A0A140T913 38113889
    817681 8tbw:D (2.081) BS01 peptide ? N/A A0A140T913 38113889
    817682 8tbx:A (2.71) BS01 ADP 3.6.4.13 GO:0003676 ... Q92499 N/A
    817683 8tbx:A (2.71) BS02 ZN 3.6.4.13 GO:0003676 ... Q92499 N/A
    817684 8tc0:A (1.88) BS01 EIC ? GO:0016020 ... U5WI05 38805567
    817685 8tc0:B (1.88) BS01 FUC ? GO:0016020 ... U5WI05 38805567
    817686 8tc0:B (1.88) BS02 EIC ? GO:0016020 ... U5WI05 38805567
    817687 8tc0:C (1.88) BS01 EIC ? GO:0016020 ... U5WI05 38805567
    817688 8tc1:A (1.92) BS01 EIC ? GO:0016020 ... Q3ZTF3 38805567
    817689 8tc1:B (1.92) BS01 EIC ? GO:0016020 ... Q3ZTF3 38805567
    817690 8tc1:C (1.92) BS01 EIC ? GO:0016020 ... Q3ZTF3 38805567
    817691 8tc3:A (2.57) BS01 SF4 ?
    1.18.6.1
    GO:0005524 ... P00459
    Q5S3G7
    38575747
    817692 8tc3:B (2.57) BS01 SF4 ?
    1.18.6.1
    GO:0005524 ... P00459
    Q5S3G7
    38575747
    817693 8tc8:A (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    817694 8tc8:B (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    817695 8tc8:C (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    817696 8tc8:D (1.9) BS01 NSS 6.1.1.22 GO:0000166 ... O43776 38297033
    817697 8tc9:A (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    817698 8tc9:B (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    817699 8tc9:C (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    817700 8tc9:D (2.0) BS01 ZTE 6.1.1.22 GO:0000166 ... O43776 38297033
    817701 8tce:A (1.07) BS01 HWF 3.4.21.- N/A P08519 38720069
    817702 8tce:B (1.07) BS01 HWF 3.4.21.- N/A P08519 38720069
    817703 8tcf:A (2.9) BS01 CA ? GO:0007155 ... P06756 37704610
    817704 8tcf:A (2.9) BS02 CA ? GO:0007155 ... P06756 37704610
    817705 8tcf:A (2.9) BS03 CA ? GO:0007155 ... P06756 37704610
    817706 8tcf:A (2.9) BS04 CA ? GO:0007155 ... P06756 37704610
    817707 8tcf:B (2.9) BS01 CA ? N/A P26012 37704610
    817708 8tcf:B (2.9) BS02 MG ? N/A P26012 37704610
    817709 8tcg:A (3.4) BS01 CA ? GO:0007155 ... P06756 37704610
    817710 8tcg:A (3.4) BS02 CA ? GO:0007155 ... P06756 37704610
    817711 8tcg:A (3.4) BS03 CA ? GO:0007155 ... P06756 37704610
    817712 8tcg:A (3.4) BS04 CA ? GO:0007155 ... P06756 37704610
    817713 8tcg:B (3.4) BS01 MN ? N/A P18564 37704610
    817714 8tcg:B (3.4) BS02 MN ? N/A P18564 37704610
    817715 8tcg:B (3.4) BS03 MN ? N/A P18564 37704610
    817716 8tct:A (1.86) BS01 UC6 ? GO:0016853 ... Q8A5T2 38898276
    817717 8tct:A (1.86) BS02 CO ? GO:0016853 ... Q8A5T2 38898276
    817718 8tcu:A (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    817719 8tcu:A (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    817720 8tcu:B (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    817721 8tcu:B (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    817722 8tcu:C (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    817723 8tcu:C (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    817724 8tcu:D (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    817725 8tcu:D (2.0) BS02 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    817726 8tcu:E (2.0) BS01 ZR3 1.5.1.2 GO:0004735 ... P32322 38411104
    817727 8tcv:B (1.74) BS01 ZR0 1.5.1.2 GO:0004735 ... P32322 38411104
    817728 8tcw:A (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    817729 8tcw:A (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    817730 8tcw:B (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    817731 8tcw:B (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    817732 8tcw:C (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    817733 8tcw:C (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    817734 8tcw:D (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    817735 8tcw:D (1.94) BS02 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    817736 8tcw:E (1.94) BS01 ZR6 1.5.1.2 GO:0004735 ... P32322 38411104
    817737 8tcx:A (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    817738 8tcx:A (1.72) BS02 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    817739 8tcx:B (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    817740 8tcx:C (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    817741 8tcx:C (1.72) BS02 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    817742 8tcx:D (1.72) BS01 ZR9 1.5.1.2 GO:0004735 ... P32322 38411104
    817743 8tcy:A (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104
    817744 8tcy:B (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104
    817745 8tcy:C (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104
    817746 8tcy:D (1.95) BS01 ZRE 1.5.1.2 GO:0004735 ... P32322 38411104
    817747 8tcz:A (2.1) BS01 ZRI 1.5.1.2 GO:0004735 ... P32322 38411104
    817748 8tcz:B (2.1) BS01 ZRI 1.5.1.2 GO:0004735 ... P32322 38411104
    817749 8td0:A (2.2) BS01 ZS5 1.5.1.2 GO:0004735 ... P32322 38411104
    817750 8td0:B (2.2) BS01 ZS5 1.5.1.2 GO:0004735 ... P32322 38411104
    817751 8td0:C (2.2) BS01 ZS5 1.5.1.2 GO:0004735 ... P32322 38411104
    817752 8td0:D (2.2) BS01 ZS5 1.5.1.2 GO:0004735 ... P32322 38411104
    817753 8td1:A (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    817754 8td1:A (1.88) BS02 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    817755 8td1:B (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    817756 8td1:B (1.88) BS02 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    817757 8td1:C (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    817758 8td1:C (1.88) BS02 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    817759 8td1:D (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    817760 8td1:D (1.88) BS02 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    817761 8td1:E (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    817762 8tde:A (1.85) BS01 GLC ? GO:0016787 ... Q8A5T1 38898276
    817763 8tdf:A (2.1) BS01 NAD ? N/A N/A 38898276
    817764 8tdf:B (2.1) BS01 NAD ? N/A N/A 38898276
    817765 8tdf:C (2.1) BS01 NAD ? N/A N/A 38898276
    817766 8tdf:D (2.1) BS01 NAD ? N/A N/A 38898276
    817767 8tdp:A (1.85) BS01 HEM 1.14.19.70 GO:0004497 ... P9WPP7 37939223
    817768 8tdp:A (1.85) BS02 YTT 1.14.19.70 GO:0004497 ... P9WPP7 37939223
    817769 8tdq:A (1.65) BS01 HEM 1.14.19.70 GO:0004497 ... P9WPP7 37939223
    817770 8tdq:A (1.65) BS02 YTT 1.14.19.70 GO:0004497 ... P9WPP7 37939223
    817771 8tdr:A (3.32) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817772 8tdr:B (3.32) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817773 8tdr:C (3.32) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817774 8tdr:D (3.32) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817775 8tdu:A (3.11) BS01 X3N 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    817776 8tdu:A (3.11) BS02 ZWE 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    817777 8tdu:C (3.11) BS01 X3N 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    817778 8tdu:C (3.11) BS02 ZWE 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    817779 8tdv:A (3.44) BS01 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817780 8tdv:A (3.44) BS02 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817781 8tdv:A (3.44) BS03 FE 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817782 8tdv:B (3.44) BS01 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817783 8tdv:B (3.44) BS02 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817784 8tdv:B (3.44) BS03 FE 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817785 8tdw:A (3.04) BS01 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817786 8tdw:A (3.04) BS02 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817787 8tdw:A (3.04) BS03 FE 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817788 8tdw:B (3.04) BS01 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817789 8tdw:B (3.04) BS02 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817790 8tdw:B (3.04) BS03 FE 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    817791 8te1:A (2.48) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817792 8te1:B (2.48) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817793 8te1:C (2.48) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817794 8te1:D (2.48) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817795 8te3:A (3.2) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817796 8te3:B (3.2) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817797 8te3:C (3.2) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817798 8te3:D (3.2) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817799 8te4:A (2.65) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    817800 8te4:B (2.65) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218