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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    813401 8shq:H (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    813402 8shq:H (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    813403 8shq:Q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    813404 8shq:Q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    813405 8shq:Z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    813406 8shq:Z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    813407 8shq:a (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    813408 8shq:a (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    813409 8shq:b (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    813410 8shq:b (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    813411 8shq:d (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    813412 8shq:d (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    813413 8shq:e (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    813414 8shq:e (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    813415 8shq:g (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    813416 8shq:g (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    813417 8shq:h (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    813418 8shq:h (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    813419 8shq:q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    813420 8shq:q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    813421 8shq:z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    813422 8shq:z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    813423 8shr:A (1.92) BS01 HIY 2.1.1.319 GO:0016274 ... O60678 N/A
    813424 8sht:A (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    813425 8sht:A (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    813426 8sht:B (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    813427 8sht:B (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    813428 8sht:D (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    813429 8sht:D (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    813430 8sht:E (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    813431 8sht:E (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    813432 8sht:G (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    813433 8sht:G (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    813434 8sht:H (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    813435 8sht:H (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    813436 8sht:Q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    813437 8sht:Q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    813438 8sht:Z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    813439 8sht:Z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    813440 8sht:a (3.0) BS01 ADP ? GO:0000242 ... P17987 37852256
    813441 8sht:a (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    813442 8sht:b (3.0) BS01 ADP ? GO:0002199 ... P78371 37852256
    813443 8sht:b (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    813444 8sht:d (3.0) BS01 ADP ? GO:0002199 ... P50991 37852256
    813445 8sht:d (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    813446 8sht:e (3.0) BS01 ADP ? GO:0003730 ... P48643 37852256
    813447 8sht:e (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    813448 8sht:g (3.0) BS01 ADP ? GO:0002199 ... P49368 37852256
    813449 8sht:g (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    813450 8sht:h (3.0) BS01 ADP ? GO:0005515 ... Q99832 37852256
    813451 8sht:h (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    813452 8sht:q (3.0) BS01 ADP ? GO:0002199 ... P50990 37852256
    813453 8sht:q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    813454 8sht:z (3.0) BS01 ADP ? GO:0003723 ... P40227 37852256
    813455 8sht:z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    813456 8shu:C (1.71) BS01 ZN 2.7.7.86 N/A Q8C6L5 38740774
    813457 8shy:C (1.77) BS01 ZN 2.7.7.86 N/A Q8C6L5 38740774
    813458 8shy:C (1.77) BS02 ATP 2.7.7.86 N/A Q8C6L5 38740774
    813459 8shz:A (2.4) BS01 ZN 2.7.7.86 N/A Q8N884 38740774
    813460 8si0:A (2.7) BS01 1SY 2.7.7.86 N/A Q8N884 38740774
    813461 8si0:A (2.7) BS02 ZN 2.7.7.86 N/A Q8N884 38740774
    813462 8si2:A (2.19) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813463 8si2:A (2.19) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813464 8si2:A (2.19) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813465 8si2:A (2.19) BS04 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813466 8si2:B (2.19) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813467 8si2:B (2.19) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813468 8si2:B (2.19) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813469 8si2:B (2.19) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813470 8si2:C (2.19) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813471 8si2:C (2.19) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813472 8si2:C (2.19) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813473 8si2:C (2.19) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813474 8si2:D (2.19) BS01 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813475 8si2:D (2.19) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813476 8si2:D (2.19) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813477 8si2:D (2.19) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813478 8si3:A (2.61) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813479 8si3:A (2.61) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813480 8si3:A (2.61) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813481 8si3:B (2.61) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813482 8si3:B (2.61) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813483 8si3:B (2.61) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813484 8si3:C (2.61) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813485 8si3:C (2.61) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813486 8si3:C (2.61) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813487 8si3:D (2.61) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813488 8si3:D (2.61) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813489 8si3:D (2.61) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813490 8si4:A (2.46) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813491 8si4:A (2.46) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813492 8si4:A (2.46) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813493 8si4:A (2.46) BS04 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813494 8si4:B (2.46) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813495 8si4:B (2.46) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813496 8si4:B (2.46) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813497 8si4:B (2.46) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813498 8si4:C (2.46) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813499 8si4:C (2.46) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813500 8si4:C (2.46) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813501 8si4:C (2.46) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813502 8si4:D (2.46) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813503 8si4:D (2.46) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813504 8si4:D (2.46) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813505 8si4:D (2.46) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813506 8si5:A (2.17) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813507 8si5:A (2.17) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813508 8si5:A (2.17) BS03 ZY8 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813509 8si5:A (2.17) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813510 8si5:A (2.17) BS05 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813511 8si5:B (2.17) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813512 8si5:B (2.17) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813513 8si5:B (2.17) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813514 8si5:B (2.17) BS04 ZY8 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813515 8si5:B (2.17) BS05 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813516 8si5:C (2.17) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813517 8si5:C (2.17) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813518 8si5:C (2.17) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813519 8si5:C (2.17) BS04 ZY8 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813520 8si5:C (2.17) BS05 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813521 8si5:D (2.17) BS01 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813522 8si5:D (2.17) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813523 8si5:D (2.17) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813524 8si5:D (2.17) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813525 8si5:D (2.17) BS05 ZY8 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813526 8si6:A (2.44) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813527 8si6:A (2.44) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813528 8si6:A (2.44) BS03 ZY8 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813529 8si6:B (2.44) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813530 8si6:B (2.44) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813531 8si6:B (2.44) BS03 ZY8 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813532 8si6:B (2.44) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813533 8si6:C (2.44) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813534 8si6:C (2.44) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813535 8si6:C (2.44) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813536 8si6:C (2.44) BS04 ZY8 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813537 8si6:C (2.44) BS05 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813538 8si6:D (2.44) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813539 8si6:D (2.44) BS02 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813540 8si6:D (2.44) BS03 ZY8 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813541 8si7:A (2.59) BS01 3FD 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813542 8si7:A (2.59) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813543 8si7:A (2.59) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813544 8si7:A (2.59) BS04 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813545 8si7:B (2.59) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813546 8si7:B (2.59) BS02 3FD 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813547 8si7:B (2.59) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813548 8si7:B (2.59) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813549 8si7:B (2.59) BS05 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813550 8si7:C (2.59) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813551 8si7:C (2.59) BS02 3FD 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813552 8si7:C (2.59) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813553 8si7:C (2.59) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813554 8si7:C (2.59) BS05 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813555 8si7:D (2.59) BS01 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813556 8si7:D (2.59) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813557 8si7:D (2.59) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813558 8si7:D (2.59) BS04 3FD 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813559 8si7:D (2.59) BS05 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813560 8si8:A (2.99) BS01 3FD 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813561 8si8:A (2.99) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813562 8si8:A (2.99) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813563 8si8:A (2.99) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813564 8si8:A (2.99) BS05 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813565 8si8:B (2.99) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813566 8si8:B (2.99) BS02 3FD 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813567 8si8:B (2.99) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813568 8si8:B (2.99) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813569 8si8:B (2.99) BS05 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813570 8si8:C (2.99) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813571 8si8:C (2.99) BS02 3FD 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813572 8si8:C (2.99) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813573 8si8:C (2.99) BS04 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813574 8si8:C (2.99) BS05 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813575 8si8:D (2.99) BS01 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813576 8si8:D (2.99) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813577 8si8:D (2.99) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813578 8si8:D (2.99) BS04 3FD 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813579 8si8:D (2.99) BS05 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813580 8si9:A (2.98) BS01 Y4B ? GO:0004888 ... P47870 37607940
    813581 8si9:A (2.98) BS02 ABU ? GO:0004888 ... P47870 37607940
    813582 8si9:B (2.98) BS01 Y4B ? GO:0004888 ... P14867 37607940
    813583 8si9:B (2.98) BS02 ABU ? GO:0004888 ... P14867 37607940
    813584 8si9:C (2.98) BS01 ABU ? GO:0004888 ... P47870 37607940
    813585 8si9:C (2.98) BS02 Y4B ? GO:0004888 ... P47870 37607940
    813586 8si9:D (2.98) BS01 ABU ? GO:0004888 ... P14867 37607940
    813587 8si9:D (2.98) BS02 Y4B ? GO:0004888 ... P14867 37607940
    813588 8si9:E (2.98) BS01 MAN ? GO:0004888 ... P18507 37607940
    813589 8sia:A (2.91) BS01 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813590 8sia:A (2.91) BS02 6RA 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813591 8sia:A (2.91) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813592 8sia:A (2.91) BS04 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813593 8sia:B (2.91) BS01 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813594 8sia:B (2.91) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813595 8sia:B (2.91) BS03 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813596 8sia:B (2.91) BS04 6RA 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813597 8sia:B (2.91) BS05 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813598 8sia:C (2.91) BS01 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813599 8sia:C (2.91) BS02 CLR 2.7.11.1 GO:0005216 ... Q923J1 37156763
    813600 8sia:C (2.91) BS03 DU0 2.7.11.1 GO:0005216 ... Q923J1 37156763
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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