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BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    812801 8sgc:B (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    812802 8sgc:B (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    812803 8sgc:D (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    812804 8sgc:D (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    812805 8sgc:E (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    812806 8sgc:E (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    812807 8sgc:G (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    812808 8sgc:G (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    812809 8sgc:H (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    812810 8sgc:H (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    812811 8sgc:Q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    812812 8sgc:Q (2.9) BS02 MG ? GO:0002199 ... P50990 37852256
    812813 8sgc:Q (2.9) BS03 AF3 ? GO:0002199 ... P50990 37852256
    812814 8sgc:Z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    812815 8sgc:Z (2.9) BS02 MG ? GO:0003723 ... P40227 37852256
    812816 8sgc:Z (2.9) BS03 AF3 ? GO:0003723 ... P40227 37852256
    812817 8sgc:a (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    812818 8sgc:a (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    812819 8sgc:b (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    812820 8sgc:b (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    812821 8sgc:d (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    812822 8sgc:d (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    812823 8sgc:e (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    812824 8sgc:e (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    812825 8sgc:g (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    812826 8sgc:g (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    812827 8sgc:h (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    812828 8sgc:h (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    812829 8sgc:q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    812830 8sgc:q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    812831 8sgc:z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    812832 8sgc:z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    812833 8sgd:A (2.66) BS01 GDP ? GO:0000144 ... P25342 37315820
    812834 8sgd:A (2.66) BS02 GTP ? GO:0000144 ... P25342 37315820
    812835 8sgd:B (2.66) BS01 GDP ? GO:0005525 ... P32457 37315820
    812836 8sgd:B (2.66) BS02 GTP ? GO:0005525 ... P32457 37315820
    812837 8sgd:C (2.66) BS01 GDP ? GO:0000144 ... P25342 37315820
    812838 8sgd:C (2.66) BS02 GTP ? GO:0000144 ... P25342 37315820
    812839 8sgd:D (2.66) BS01 GDP ? GO:0005525 ... P32457 37315820
    812840 8sgd:D (2.66) BS02 GTP ? GO:0005525 ... P32457 37315820
    812841 8sge:A (1.509) BS01 ZWS ? N/A Q9Y2U9 38177675
    812842 8sge:B (1.509) BS01 ZWS ? N/A Q9Y2U9 38177675
    812843 8sgf:A (1.418) BS01 peptide ? N/A Q9Y2U9 38177675
    812844 8sgf:B (1.418) BS01 peptide ? N/A Q9Y2U9 38177675
    812845 8sgh:A (3.17) BS01 peptide ? GO:0003723 ... Q92973 37279758
    812846 8sgi:A (2.9) BS01 EKY ? GO:0005432 ... P32418 N/A
    812847 8sgi:A (2.9) BS02 CA ? GO:0005432 ... P32418 N/A
    812848 8sgi:A (2.9) BS03 CA ? GO:0005432 ... P32418 N/A
    812849 8sgi:A (2.9) BS04 CA ? GO:0005432 ... P32418 N/A
    812850 8sgi:A (2.9) BS05 CA ? GO:0005432 ... P32418 N/A
    812851 8sgi:A (2.9) BS06 CA ? GO:0005432 ... P32418 N/A
    812852 8sgi:A (2.9) BS07 CA ? GO:0005432 ... P32418 N/A
    812853 8sgj:A (3.1) BS01 CA ? GO:0005432 ... P32418 37794011
    812854 8sgj:A (3.1) BS02 CA ? GO:0005432 ... P32418 37794011
    812855 8sgj:A (3.1) BS03 CA ? GO:0005432 ... P32418 37794011
    812856 8sgj:A (3.1) BS04 CA ? GO:0005432 ... P32418 37794011
    812857 8sgj:A (3.1) BS05 CA ? GO:0005432 ... P32418 37794011
    812858 8sgj:A (3.1) BS06 CA ? GO:0005432 ... P32418 37794011
    812859 8sgj:A (3.1) BS07 NA ? GO:0005432 ... P32418 37794011
    812860 8sgj:A (3.1) BS08 NA ? GO:0005432 ... P32418 37794011
    812861 8sgj:A (3.1) BS09 NA ? GO:0005432 ... P32418 37794011
    812862 8sgk:A (3.7) BS01 LBV 2.7.13.3 GO:0000156 ... Q9RZA4 N/A
    812863 8sgk:B (3.7) BS01 LBV 2.7.13.3 GO:0000156 ... Q9RZA4 N/A
    812864 8sgl:A (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    812865 8sgl:A (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    812866 8sgl:B (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    812867 8sgl:B (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    812868 8sgl:D (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    812869 8sgl:D (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    812870 8sgl:E (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    812871 8sgl:E (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    812872 8sgl:G (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    812873 8sgl:G (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    812874 8sgl:H (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    812875 8sgl:H (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    812876 8sgl:Q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    812877 8sgl:Q (2.9) BS02 MG ? GO:0002199 ... P50990 37852256
    812878 8sgl:Q (2.9) BS03 AF3 ? GO:0002199 ... P50990 37852256
    812879 8sgl:Z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    812880 8sgl:Z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    812881 8sgl:a (2.9) BS01 ADP ? GO:0000242 ... P17987 37852256
    812882 8sgl:a (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    812883 8sgl:b (2.9) BS01 ADP ? GO:0002199 ... P78371 37852256
    812884 8sgl:b (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    812885 8sgl:d (2.9) BS01 ADP ? GO:0002199 ... P50991 37852256
    812886 8sgl:d (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    812887 8sgl:e (2.9) BS01 ADP ? GO:0003730 ... P48643 37852256
    812888 8sgl:e (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    812889 8sgl:g (2.9) BS01 ADP ? GO:0002199 ... P49368 37852256
    812890 8sgl:g (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    812891 8sgl:h (2.9) BS01 ADP ? GO:0005515 ... Q99832 37852256
    812892 8sgl:h (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    812893 8sgl:q (2.9) BS01 ADP ? GO:0002199 ... P50990 37852256
    812894 8sgl:q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    812895 8sgl:z (2.9) BS01 ADP ? GO:0003723 ... P40227 37852256
    812896 8sgl:z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    812897 8sgm:A (2.5) BS01 A1AHF ? N/A P15813 N/A
    812898 8sgn:G (2.2) BS01 FUC ? N/A P03200 N/A
    812899 8sgo:A (2.65) BS01 ABU ? GO:0004888 ... P47870 37607940
    812900 8sgo:B (2.65) BS01 ABU ? GO:0004888 ... P14867 37607940
    812901 8sgo:C (2.65) BS01 ABU ? GO:0004888 ... P47870 37607940
    812902 8sgo:C (2.65) BS02 Q3G ? GO:0004888 ... P47870 37607940
    812903 8sgo:D (2.65) BS01 ABU ? GO:0004888 ... P14867 37607940
    812904 8sgo:E (2.65) BS01 MAN ? GO:0004888 ... P18507 37607940
    812905 8sgo:E (2.65) BS02 A8W ? GO:0004888 ... P18507 37607940
    812906 8sgp:A (2.69) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 37839702
    812907 8sgp:A (2.69) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 37839702
    812908 8sgp:B (2.69) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 37839702
    812909 8sgp:B (2.69) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 37839702
    812910 8sgp:C (2.69) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 37839702
    812911 8sgp:C (2.69) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 37839702
    812912 8sgp:D (2.69) BS01 FAD 1.3.8.7 GO:0001889 ... P11310 37839702
    812913 8sgp:D (2.69) BS02 FAD 1.3.8.7 GO:0001889 ... P11310 37839702
    812914 8sgq:A (3.7) BS01 ADP ? GO:0000242 ... P17987 37852256
    812915 8sgq:B (3.7) BS01 ADP ? GO:0002199 ... P78371 37852256
    812916 8sgq:D (3.7) BS01 ADP ? GO:0002199 ... P50991 37852256
    812917 8sgq:E (3.7) BS01 ADP ? GO:0003730 ... P48643 37852256
    812918 8sgq:G (3.7) BS01 ADP ? GO:0002199 ... P49368 37852256
    812919 8sgq:H (3.7) BS01 ADP ? GO:0005515 ... Q99832 37852256
    812920 8sgq:Q (3.7) BS01 ADP ? GO:0002199 ... P50990 37852256
    812921 8sgq:Z (3.7) BS01 ADP ? GO:0003723 ... P40227 37852256
    812922 8sgq:a (3.7) BS01 ADP ? GO:0000242 ... P17987 37852256
    812923 8sgq:b (3.7) BS01 ADP ? GO:0002199 ... P78371 37852256
    812924 8sgq:d (3.7) BS01 ADP ? GO:0002199 ... P50991 37852256
    812925 8sgq:e (3.7) BS01 ADP ? GO:0003730 ... P48643 37852256
    812926 8sgq:g (3.7) BS01 ADP ? GO:0002199 ... P49368 37852256
    812927 8sgq:h (3.7) BS01 ADP ? GO:0005515 ... Q99832 37852256
    812928 8sgq:q (3.7) BS01 ADP ? GO:0002199 ... P50990 37852256
    812929 8sgq:z (3.7) BS01 ADP ? GO:0003723 ... P40227 37852256
    812930 8sgr:A (2.84) BS01 FAD 1.3.8.1
    1.3.8.4
    GO:0003995 ... P26440 37839702
    812931 8sgr:A (2.84) BS02 FAD 1.3.8.1
    1.3.8.4
    GO:0003995 ... P26440 37839702
    812932 8sgr:B (2.84) BS01 FAD 1.3.8.1
    1.3.8.4
    GO:0003995 ... P26440 37839702
    812933 8sgr:B (2.84) BS02 FAD 1.3.8.1
    1.3.8.4
    GO:0003995 ... P26440 37839702
    812934 8sgr:C (2.84) BS01 FAD 1.3.8.1
    1.3.8.4
    GO:0003995 ... P26440 37839702
    812935 8sgr:C (2.84) BS02 FAD 1.3.8.1
    1.3.8.4
    GO:0003995 ... P26440 37839702
    812936 8sgr:D (2.84) BS01 FAD 1.3.8.1
    1.3.8.4
    GO:0003995 ... P26440 37839702
    812937 8sgr:D (2.84) BS02 FAD 1.3.8.1
    1.3.8.4
    GO:0003995 ... P26440 37839702
    812938 8sgs:A (3.15) BS01 FAD 1.3.8.1 GO:0003995 ... P16219 37839702
    812939 8sgs:A (3.15) BS02 COA 1.3.8.1 GO:0003995 ... P16219 37839702
    812940 8sgs:A (3.15) BS03 FAD 1.3.8.1 GO:0003995 ... P16219 37839702
    812941 8sgs:B (3.15) BS01 FAD 1.3.8.1 GO:0003995 ... P16219 37839702
    812942 8sgs:B (3.15) BS02 FAD 1.3.8.1 GO:0003995 ... P16219 37839702
    812943 8sgs:B (3.15) BS03 COA 1.3.8.1 GO:0003995 ... P16219 37839702
    812944 8sgs:C (3.15) BS01 FAD 1.3.8.1 GO:0003995 ... P16219 37839702
    812945 8sgs:C (3.15) BS02 COA 1.3.8.1 GO:0003995 ... P16219 37839702
    812946 8sgs:C (3.15) BS03 FAD 1.3.8.1 GO:0003995 ... P16219 37839702
    812947 8sgs:D (3.15) BS01 FAD 1.3.8.1 GO:0003995 ... P16219 37839702
    812948 8sgs:D (3.15) BS02 FAD 1.3.8.1 GO:0003995 ... P16219 37839702
    812949 8sgs:D (3.15) BS03 COA 1.3.8.1 GO:0003995 ... P16219 37839702
    812950 8sgt:A (3.6) BS01 CA ? GO:0005432 ... P32418 37794011
    812951 8sgt:A (3.6) BS02 CA ? GO:0005432 ... P32418 37794011
    812952 8sgt:A (3.6) BS03 CA ? GO:0005432 ... P32418 37794011
    812953 8sgt:A (3.6) BS04 CA ? GO:0005432 ... P32418 37794011
    812954 8sgt:A (3.6) BS05 CA ? GO:0005432 ... P32418 37794011
    812955 8sgt:A (3.6) BS06 CA ? GO:0005432 ... P32418 37794011
    812956 8sgv:A (2.58) BS01 HEM 1.11.1.6 GO:0000302 ... P04040 37839702
    812957 8sgv:A (2.58) BS02 NDP 1.11.1.6 GO:0000302 ... P04040 37839702
    812958 8sgv:B (2.58) BS01 HEM 1.11.1.6 GO:0000302 ... P04040 37839702
    812959 8sgv:B (2.58) BS02 NDP 1.11.1.6 GO:0000302 ... P04040 37839702
    812960 8sgv:C (2.58) BS01 HEM 1.11.1.6 GO:0000302 ... P04040 37839702
    812961 8sgv:C (2.58) BS02 NDP 1.11.1.6 GO:0000302 ... P04040 37839702
    812962 8sgv:D (2.58) BS01 HEM 1.11.1.6 GO:0000302 ... P04040 37839702
    812963 8sgv:D (2.58) BS02 NDP 1.11.1.6 GO:0000302 ... P04040 37839702
    812964 8sgw:C (2.5) BS01 CLR ? GO:0005886 ... I3L8V6 38184688
    812965 8sgw:C (2.5) BS02 CLR ? GO:0005886 ... I3L8V6 38184688
    812966 8sgw:C (2.5) BS03 CLR ? GO:0005886 ... I3L8V6 38184688
    812967 8sgw:C (2.5) BS04 CLR ? GO:0005886 ... I3L8V6 38184688
    812968 8sgw:C (2.5) BS05 LBN ? GO:0005886 ... I3L8V6 38184688
    812969 8sgw:C (2.5) BS06 LBN ? GO:0005886 ... I3L8V6 38184688
    812970 8sgw:C (2.5) BS07 LBN ? GO:0005886 ... I3L8V6 38184688
    812971 8sgw:C (2.5) BS08 LBN ? GO:0005886 ... I3L8V6 38184688
    812972 8sgw:C (2.5) BS09 CL ? GO:0005886 ... I3L8V6 38184688
    812973 8sgw:C (2.5) BS10 AV0 ? GO:0005886 ... I3L8V6 38184688
    812974 8sgw:C (2.5) BS11 LBN ? GO:0005886 ... I3L8V6 38184688
    812975 8sgw:D (2.5) BS01 LBN ? GO:0005886 ... I3L8V6 38184688
    812976 8sgw:D (2.5) BS02 CLR ? GO:0005886 ... I3L8V6 38184688
    812977 8sgw:D (2.5) BS03 CLR ? GO:0005886 ... I3L8V6 38184688
    812978 8sgw:D (2.5) BS04 CLR ? GO:0005886 ... I3L8V6 38184688
    812979 8sgw:D (2.5) BS05 CLR ? GO:0005886 ... I3L8V6 38184688
    812980 8sgw:D (2.5) BS06 LBN ? GO:0005886 ... I3L8V6 38184688
    812981 8sgw:D (2.5) BS07 LBN ? GO:0005886 ... I3L8V6 38184688
    812982 8sgw:D (2.5) BS08 LBN ? GO:0005886 ... I3L8V6 38184688
    812983 8sgw:D (2.5) BS09 LBN ? GO:0005886 ... I3L8V6 38184688
    812984 8sgw:D (2.5) BS10 CL ? GO:0005886 ... I3L8V6 38184688
    812985 8sgw:D (2.5) BS11 AV0 ? GO:0005886 ... I3L8V6 38184688
    812986 8sgx:C (10.3) BS01 BTI ? GO:0004658 ... A0A640KR17 37128595
    812987 8sgx:E (10.3) BS01 BTI ? GO:0004658 ... A0A640KR17 37128595
    812988 8sgx:F (10.3) BS01 BTI ? GO:0004658 ... A0A640KR17 37128595
    812989 8sgx:G (10.3) BS01 BTI ? GO:0004658 ... A0A640KR17 37128595
    812990 8sgx:H (10.3) BS01 BTI ? GO:0004658 ... A0A640KR17 37128595
    812991 8sgx:S (10.3) BS01 BTI 6.4.1.3 GO:0004658 ... A0A640KC69 37128595
    812992 8sgx:V (10.3) BS01 BTI 6.4.1.3 GO:0004658 ... A0A640KC69 37128595
    812993 8sgx:X (10.3) BS01 BTI 6.4.1.3 GO:0004658 ... A0A640KC69 37128595
    812994 8sgx:Z (10.3) BS01 BTI 6.4.1.3 GO:0004658 ... A0A640KC69 37128595
    812995 8sgy:B (8.62) BS01 BTI 6.4.1.3 GO:0004658 ... A0A640KC69 37128595
    812996 8sgy:C (8.62) BS01 BTI ? GO:0004658 ... A0A640KR17 37128595
    812997 8sgy:D (8.62) BS01 BTI ? GO:0004658 ... A0A640KR17 37128595
    812998 8sgy:E (8.62) BS01 BTI ? GO:0004658 ... A0A640KR17 37128595
    812999 8sgy:G (8.62) BS01 BTI ? GO:0004658 ... A0A640KR17 37128595
    813000 8sgy:S (8.62) BS01 BTI 6.4.1.3 GO:0004658 ... A0A640KC69 37128595

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218