Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4039 4040 4041 4042 4043 4044 4045 4046 4047 4048 4049 4050 4051 4052 4053 4054 4055 4056 4057 4058 4059 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    809601 8rcs:B (4.46) BS03 peptide ? GO:0000028 ... P0A7V0 38409277
    809602 8rcs:B (4.46) BS04 ZN ? GO:0000028 ... P0A7V0 38409277
    809603 8rcs:B2 (4.46) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    809604 8rcs:C1 (4.46) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    809605 8rcs:C1 (4.46) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    809606 8rcs:C2 (4.46) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    809607 8rcs:D1 (4.46) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    809608 8rcs:D2 (4.46) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    809609 8rcs:E1 (4.46) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    809610 8rcs:E1 (4.46) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    809611 8rcs:E2 (4.46) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    809612 8rcs:E2 (4.46) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    809613 8rcs:F1 (4.46) BS01 rna ? GO:0002181 ... P02358 38409277
    809614 8rcs:F2 (4.46) BS01 rna ? GO:0002181 ... P02358 38409277
    809615 8rcs:G1 (4.46) BS01 rna ? GO:0000028 ... P02359 38409277
    809616 8rcs:G2 (4.46) BS01 rna ? GO:0000028 ... P02359 38409277
    809617 8rcs:G2 (4.46) BS02 rna ? GO:0000028 ... P02359 38409277
    809618 8rcs:H1 (4.46) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    809619 8rcs:H2 (4.46) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    809620 8rcs:I1 (4.46) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    809621 8rcs:I2 (4.46) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    809622 8rcs:I2 (4.46) BS02 rna ? GO:0000049 ... P0A7X3 38409277
    809623 8rcs:J1 (4.46) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    809624 8rcs:J2 (4.46) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    809625 8rcs:K1 (4.46) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    809626 8rcs:K2 (4.46) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    809627 8rcs:L1 (4.46) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    809628 8rcs:L2 (4.46) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    809629 8rcs:M1 (4.46) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    809630 8rcs:M2 (4.46) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    809631 8rcs:N1 (4.46) BS01 peptide ? GO:0000028 ... P0AG59 38409277
    809632 8rcs:N1 (4.46) BS02 rna ? GO:0000028 ... P0AG59 38409277
    809633 8rcs:N2 (4.46) BS01 rna ? GO:0000028 ... P0AG59 38409277
    809634 8rcs:O1 (4.46) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    809635 8rcs:O2 (4.46) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    809636 8rcs:O2 (4.46) BS02 rna ? GO:0000028 ... P0ADZ4 38409277
    809637 8rcs:P1 (4.46) BS01 rna ? GO:0000028 ... P0A7T3 38409277
    809638 8rcs:Q1 (4.46) BS01 rna ? GO:0000028 ... P0AG63 38409277
    809639 8rcs:Q2 (4.46) BS01 rna ? GO:0000028 ... P0AG63 38409277
    809640 8rcs:R1 (4.46) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    809641 8rcs:R2 (4.46) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    809642 8rcs:S1 (4.46) BS01 peptide ? GO:0000028 ... P0A7U3 38409277
    809643 8rcs:S1 (4.46) BS02 rna ? GO:0000028 ... P0A7U3 38409277
    809644 8rcs:S2 (4.46) BS01 rna ? GO:0000028 ... P0A7U3 38409277
    809645 8rcs:T1 (4.46) BS01 rna ? GO:0000028 ... P0A7U7 38409277
    809646 8rcs:U1 (4.46) BS01 rna ? GO:0000028 ... P68679 38409277
    809647 8rcs:U1 (4.46) BS02 rna ? GO:0000028 ... P68679 38409277
    809648 8rcs:U2 (4.46) BS01 rna ? GO:0000028 ... P68679 38409277
    809649 8rcs:U2 (4.46) BS02 rna ? GO:0000028 ... P68679 38409277
    809650 8rcs:a2 (4.46) BS01 rna ? GO:0000027 ... P0A7L0 38409277
    809651 8rcs:b2 (4.46) BS01 rna ? GO:0000027 ... P60422 38409277
    809652 8rcs:b2 (4.46) BS02 rna ? GO:0000027 ... P60422 38409277
    809653 8rcs:e2 (4.46) BS01 rna ? GO:0000027 ... P62399 38409277
    809654 8rcs:e2 (4.46) BS02 rna ? GO:0000027 ... P62399 38409277
    809655 8rcs:g2 (4.46) BS01 rna ? GO:0000027 ... P0A7N9 38409277
    809656 8rcs:h2 (4.46) BS01 rna ? GO:0000027 ... P0ADY7 38409277
    809657 8rcs:h2 (4.46) BS02 rna ? GO:0000027 ... P0ADY7 38409277
    809658 8rcs:i2 (4.46) BS01 rna ? GO:0002181 ... P0A7R1 38409277
    809659 8rcs:i2 (4.46) BS02 rna ? GO:0002181 ... P0A7R1 38409277
    809660 8rcs:l2 (4.46) BS01 rna ? GO:0002181 ... P0A7P5 38409277
    809661 8rcs:o2 (4.46) BS01 rna ? GO:0002181 ... P02413 38409277
    809662 8rcs:o2 (4.46) BS02 MG ? GO:0002181 ... P02413 38409277
    809663 8rcs:r2 (4.46) BS01 rna ? GO:0002181 ... P0C018 38409277
    809664 8rcs:r2 (4.46) BS02 rna ? GO:0002181 ... P0C018 38409277
    809665 8rcs:z2 (4.46) BS01 rna ? GO:0000027 ... P0A7L8 38409277
    809666 8rcs:z2 (4.46) BS02 rna ? GO:0000027 ... P0A7L8 38409277
    809667 8rct:12 (5.32) BS01 rna ? GO:0000027 ... P0A7M2 38409277
    809668 8rct:12 (5.32) BS02 rna ? GO:0000027 ... P0A7M2 38409277
    809669 8rct:32 (5.32) BS01 rna ? GO:0000027 ... P0AG51 38409277
    809670 8rct:32 (5.32) BS02 rna ? GO:0000027 ... P0AG51 38409277
    809671 8rct:4 (5.32) BS01 rna ? GO:0002181 ... P0A7M9 38409277
    809672 8rct:4 (5.32) BS02 rna ? GO:0002181 ... P0A7M9 38409277
    809673 8rct:4 (5.32) BS03 ZN ? GO:0002181 ... P0A7M9 38409277
    809674 8rct:62 (5.32) BS01 rna ? GO:0002181 ... P0A7Q1 38409277
    809675 8rct:B (5.32) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    809676 8rct:B (5.32) BS02 peptide ? GO:0000028 ... P0A7V0 38409277
    809677 8rct:B (5.32) BS03 ZN ? GO:0000028 ... P0A7V0 38409277
    809678 8rct:B2 (5.32) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    809679 8rct:C1 (5.32) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    809680 8rct:C1 (5.32) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    809681 8rct:C2 (5.32) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    809682 8rct:D1 (5.32) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    809683 8rct:D2 (5.32) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    809684 8rct:E1 (5.32) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    809685 8rct:E1 (5.32) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    809686 8rct:E2 (5.32) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    809687 8rct:E2 (5.32) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    809688 8rct:F1 (5.32) BS01 rna ? GO:0002181 ... P02358 38409277
    809689 8rct:F2 (5.32) BS01 rna ? GO:0002181 ... P02358 38409277
    809690 8rct:G1 (5.32) BS01 rna ? GO:0000028 ... P02359 38409277
    809691 8rct:G2 (5.32) BS01 rna ? GO:0000028 ... P02359 38409277
    809692 8rct:G2 (5.32) BS02 rna ? GO:0000028 ... P02359 38409277
    809693 8rct:H1 (5.32) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    809694 8rct:H2 (5.32) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    809695 8rct:I1 (5.32) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    809696 8rct:I2 (5.32) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    809697 8rct:I2 (5.32) BS02 rna ? GO:0000049 ... P0A7X3 38409277
    809698 8rct:J1 (5.32) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    809699 8rct:J2 (5.32) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    809700 8rct:K1 (5.32) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    809701 8rct:K2 (5.32) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    809702 8rct:L1 (5.32) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    809703 8rct:L2 (5.32) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    809704 8rct:M1 (5.32) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    809705 8rct:M2 (5.32) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    809706 8rct:N1 (5.32) BS01 peptide ? GO:0000028 ... P0AG59 38409277
    809707 8rct:N1 (5.32) BS02 rna ? GO:0000028 ... P0AG59 38409277
    809708 8rct:N2 (5.32) BS01 rna ? GO:0000028 ... P0AG59 38409277
    809709 8rct:O1 (5.32) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    809710 8rct:O2 (5.32) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    809711 8rct:O2 (5.32) BS02 rna ? GO:0000028 ... P0ADZ4 38409277
    809712 8rct:P1 (5.32) BS01 rna ? GO:0000028 ... P0A7T3 38409277
    809713 8rct:Q1 (5.32) BS01 rna ? GO:0000028 ... P0AG63 38409277
    809714 8rct:Q2 (5.32) BS01 rna ? GO:0000028 ... P0AG63 38409277
    809715 8rct:R1 (5.32) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    809716 8rct:R2 (5.32) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    809717 8rct:S1 (5.32) BS01 peptide ? GO:0000028 ... P0A7U3 38409277
    809718 8rct:S1 (5.32) BS02 rna ? GO:0000028 ... P0A7U3 38409277
    809719 8rct:S2 (5.32) BS01 rna ? GO:0000028 ... P0A7U3 38409277
    809720 8rct:T1 (5.32) BS01 rna ? GO:0000028 ... P0A7U7 38409277
    809721 8rct:U1 (5.32) BS01 rna ? GO:0000028 ... P68679 38409277
    809722 8rct:U1 (5.32) BS02 rna ? GO:0000028 ... P68679 38409277
    809723 8rct:U2 (5.32) BS01 rna ? GO:0000028 ... P68679 38409277
    809724 8rct:U2 (5.32) BS02 rna ? GO:0000028 ... P68679 38409277
    809725 8rct:a2 (5.32) BS01 rna ? GO:0000027 ... P0A7L0 38409277
    809726 8rct:b2 (5.32) BS01 rna ? GO:0000027 ... P60422 38409277
    809727 8rct:b2 (5.32) BS02 rna ? GO:0000027 ... P60422 38409277
    809728 8rct:e2 (5.32) BS01 rna ? GO:0000027 ... P62399 38409277
    809729 8rct:e2 (5.32) BS02 rna ? GO:0000027 ... P62399 38409277
    809730 8rct:g2 (5.32) BS01 rna ? GO:0000027 ... P0A7N9 38409277
    809731 8rct:h2 (5.32) BS01 rna ? GO:0000027 ... P0ADY7 38409277
    809732 8rct:h2 (5.32) BS02 rna ? GO:0000027 ... P0ADY7 38409277
    809733 8rct:i2 (5.32) BS01 rna ? GO:0002181 ... P0A7R1 38409277
    809734 8rct:i2 (5.32) BS02 rna ? GO:0002181 ... P0A7R1 38409277
    809735 8rct:l2 (5.32) BS01 rna ? GO:0002181 ... P0A7P5 38409277
    809736 8rct:o2 (5.32) BS01 rna ? GO:0002181 ... P02413 38409277
    809737 8rct:o2 (5.32) BS02 MG ? GO:0002181 ... P02413 38409277
    809738 8rct:r2 (5.32) BS01 rna ? GO:0002181 ... P0C018 38409277
    809739 8rct:r2 (5.32) BS02 rna ? GO:0002181 ... P0C018 38409277
    809740 8rct:z2 (5.32) BS01 rna ? GO:0000027 ... P0A7L8 38409277
    809741 8rct:z2 (5.32) BS02 rna ? GO:0000027 ... P0A7L8 38409277
    809742 8rcv:A (1.65) BS01 peptide ? GO:0006955 ... C5IYE8 38742159
    809743 8rcw:A (1.692) BS01 YQF ? N/A P9WMJ3 38548139
    809744 8rcw:B (1.692) BS01 YQF ? N/A P9WMJ3 38548139
    809745 8rd8:A4 (2.62) BS01 rna ? GO:0003735 ... A0A0M4TFJ4 38355796
    809746 8rd8:Af (2.62) BS01 rna ? GO:0003735 ... A0A0M4T1M3 38355796
    809747 8rd8:B (2.62) BS01 rna ? N/A A0A0M3V8U3 38355796
    809748 8rd8:B (2.62) BS02 rna ? N/A A0A0M3V8U3 38355796
    809749 8rd8:BQ (2.62) BS01 rna ? GO:0003735 ... A0A0M4U618 38355796
    809750 8rd8:Ba (2.62) BS01 rna ? GO:0003735 ... A0A0M4TEZ6 38355796
    809751 8rd8:C1 (2.62) BS01 rna ? GO:0003735 ... A0A0M3V9E8 38355796
    809752 8rd8:CT (2.62) BS01 rna ? GO:0003676 ... A0A0M4T6V9 38355796
    809753 8rd8:Cl (2.62) BS01 rna ? GO:0002181 ... A0A0M3V8Q0 38355796
    809754 8rd8:D (2.62) BS01 rna ? GO:0005840 ... A0A0M4TFB0 38355796
    809755 8rd8:Dm (2.62) BS01 rna ? GO:0003723 ... A0A0M4TE52 38355796
    809756 8rd8:E5 (2.62) BS01 rna ? GO:0003723 ... A0A0M3V8J0 38355796
    809757 8rd8:E9 (2.62) BS01 rna ? GO:0003735 ... A0A0M4U627 38355796
    809758 8rd8:F (2.62) BS01 rna ? GO:0003723 ... A0A0M4T6M9 38355796
    809759 8rd8:F7 (2.62) BS01 rna ? GO:0000049 ... A0A0M4T1L5 38355796
    809760 8rd8:F7 (2.62) BS02 rna ? GO:0000049 ... A0A0M4T1L5 38355796
    809761 8rd8:FG (2.62) BS01 rna ? GO:0003735 ... A0A0M4U628 38355796
    809762 8rd8:GR (2.62) BS01 rna ? GO:0002181 ... A0A0M5MKV2 38355796
    809763 8rd8:GS (2.62) BS01 rna ? GO:0000028 ... A0A0M3V8N5 38355796
    809764 8rd8:H (2.62) BS01 rna ? GO:0003746 ... A0A0M4U5B4 38355796
    809765 8rd8:HK (2.62) BS01 rna ? GO:0003735 ... A0A0M3V8P8 38355796
    809766 8rd8:IX (2.62) BS01 rna ? GO:0003729 ... A0A0M4TBP4 38355796
    809767 8rd8:JY (2.62) BS01 rna ? GO:0000049 ... A0A0M4TE68 38355796
    809768 8rd8:Je (2.62) BS01 rna ? GO:0003735 ... A0A0M5MJS2 38355796
    809769 8rd8:Je (2.62) BS02 rna ? GO:0003735 ... A0A0M5MJS2 38355796
    809770 8rd8:KU (2.62) BS01 rna ? GO:0003735 ... A0A0M3V8P6 38355796
    809771 8rd8:Kd (2.62) BS01 rna ? GO:0003735 ... A0A0M4T6V1 38355796
    809772 8rd8:L6 (2.62) BS01 rna ? GO:0000049 ... A0A0M4U4C3 38355796
    809773 8rd8:Lg (2.62) BS01 rna ? GO:0000049 ... A0A0M3V8J3 38355796
    809774 8rd8:MB (2.62) BS01 rna ? GO:0003735 ... A0A0M4U611 38355796
    809775 8rd8:MM (2.62) BS01 rna ? GO:0000049 ... A0A0M5MJL8 38355796
    809776 8rd8:NV (2.62) BS01 rna ? GO:0003735 ... A0A0M4SY21 38355796
    809777 8rd8:Nc (2.62) BS01 rna ? GO:0003735 ... A0A0M4TUJ2 38355796
    809778 8rd8:Nc (2.62) BS02 rna ? GO:0003735 ... A0A0M4TUJ2 38355796
    809779 8rd8:OL (2.62) BS01 rna ? GO:0003735 ... A0A0M4TF29 38355796
    809780 8rd8:OL (2.62) BS02 rna ? GO:0003735 ... A0A0M4TF29 38355796
    809781 8rd8:Oi (2.62) BS01 rna ? GO:0003735 ... A0A0M4TV08 38355796
    809782 8rd8:Oi (2.62) BS02 rna ? GO:0003735 ... A0A0M4TV08 38355796
    809783 8rd8:PO (2.62) BS01 rna ? GO:0000027 ... A0A0M5MJR6 38355796
    809784 8rd8:Pj (2.62) BS01 rna ? GO:0003735 ... A0A0M4T275 38355796
    809785 8rd8:QZ (2.62) BS01 rna ? GO:0003735 ... A0A0M4U401 38355796
    809786 8rd8:Qb (2.62) BS01 rna ? GO:0003723 ... A0A0M5TIS3 38355796
    809787 8rd8:R3 (2.62) BS01 rna ? GO:0003735 ... A0A0M5MK69 38355796
    809788 8rd8:RF (2.62) BS01 rna ? GO:0003735 ... A0A0M4SWS6 38355796
    809789 8rd8:SP (2.62) BS01 rna ? GO:0000028 ... A0A0M4TUJ8 38355796
    809790 8rd8:Sn (2.62) BS01 rna ? GO:0000027 ... A0A0M5MJH9 38355796
    809791 8rd8:TI (2.62) BS01 rna ? GO:0003723 ... A0A0M4TE60 38355796
    809792 8rd8:To (2.62) BS01 rna ? GO:0003723 ... A0A0M4T3R2 38355796
    809793 8rd8:UC (2.62) BS01 rna ? GO:0003723 ... A0A0M4U726 38355796
    809794 8rd8:UC (2.62) BS02 rna ? GO:0003723 ... A0A0M4U726 38355796
    809795 8rd8:VH (2.62) BS01 rna ? GO:0003735 ... A0A0M4TUE5 38355796
    809796 8rd8:VH (2.62) BS02 rna ? GO:0003735 ... A0A0M4TUE5 38355796
    809797 8rd8:WD (2.62) BS01 rna ? GO:0003735 ... A0A0M4T6Y7 38355796
    809798 8rd8:XE (2.62) BS01 rna ? GO:0003735 ... A0A0M4TBX9 38355796
    809799 8rd8:YW (2.62) BS01 rna ? GO:0003735 ... A0A0M4SWR7 38355796
    809800 8rd8:YW (2.62) BS02 rna ? GO:0003735 ... A0A0M4SWR7 38355796

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218