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BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    798801 8otz:RA (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798802 8otz:RB (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798803 8otz:RC (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798804 8otz:RC (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798805 8otz:RD (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798806 8otz:RE (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798807 8otz:RE (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798808 8otz:RF (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798809 8otz:RG (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798810 8otz:RG (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798811 8otz:RH (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798812 8otz:RI (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798813 8otz:RJ (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798814 8otz:RK (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798815 8otz:RK (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798816 8otz:RL (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798817 8otz:RM (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798818 8otz:RM (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798819 8otz:SA (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798820 8otz:SB (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798821 8otz:SC (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798822 8otz:SD (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798823 8otz:SE (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798824 8otz:SE (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798825 8otz:SF (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798826 8otz:SG (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798827 8otz:SH (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798828 8otz:SI (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798829 8otz:SI (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798830 8otz:SJ (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798831 8otz:SK (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798832 8otz:SL (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798833 8otz:SM (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798834 8otz:TB (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798835 8otz:TC (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798836 8otz:TD (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798837 8otz:TD (3.6) BS02 GTP ? GO:0000226 ... Q3MHM5 37327785
    798838 8otz:TE (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798839 8otz:TF (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798840 8otz:TF (3.6) BS02 GTP ? GO:0000226 ... Q3MHM5 37327785
    798841 8otz:TG (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798842 8otz:TH (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798843 8otz:TI (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798844 8otz:TJ (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798845 8otz:TJ (3.6) BS02 GTP ? GO:0000226 ... Q3MHM5 37327785
    798846 8otz:TK (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798847 8otz:TL (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798848 8otz:TL (3.6) BS02 GTP ? GO:0000226 ... Q3MHM5 37327785
    798849 8otz:TM (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798850 8otz:UB (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798851 8otz:UC (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798852 8otz:UD (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798853 8otz:UE (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798854 8otz:UF (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798855 8otz:UG (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798856 8otz:UH (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798857 8otz:UI (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798858 8otz:UJ (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798859 8otz:UK (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798860 8otz:UL (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798861 8otz:UM (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798862 8otz:UN (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798863 8otz:VB (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798864 8otz:VC (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798865 8otz:VC (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798866 8otz:VD (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798867 8otz:VE (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798868 8otz:VE (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798869 8otz:VF (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798870 8otz:VG (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798871 8otz:VG (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798872 8otz:VH (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798873 8otz:VI (3.6) BS01 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798874 8otz:VI (3.6) BS02 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798875 8otz:VJ (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798876 8otz:VK (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798877 8otz:VK (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798878 8otz:VL (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798879 8otz:VM (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798880 8otz:VN (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798881 8otz:WB (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798882 8otz:WC (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798883 8otz:WC (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798884 8otz:WD (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798885 8otz:WE (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798886 8otz:WE (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798887 8otz:WF (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798888 8otz:WG (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798889 8otz:WG (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798890 8otz:WH (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798891 8otz:WI (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798892 8otz:WJ (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798893 8otz:WK (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798894 8otz:WL (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798895 8otz:WM (3.6) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798896 8otz:WM (3.6) BS02 MG 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798897 8otz:WN (3.6) BS01 GDP ? GO:0000226 ... Q3MHM5 37327785
    798898 8ou0:A (3.5) BS01 GTP 3.6.5.- GO:0000226 ... Q32KN8 37327785
    798899 8ou0:B (3.5) BS01 peptide ? GO:0000226 ... Q3MHM5 37327785
    798900 8ou0:B (3.5) BS02 GDP ? GO:0000226 ... Q3MHM5 37327785
    798901 8ou0:C (3.5) BS01 peptide ? GO:0001669 ... A0A3Q1MYU9 37327785
    798902 8ou2:A (1.6) BS01 W2W ? GO:0006357 ... Q12830 N/A
    798903 8ou2:B (1.6) BS01 W2W ? GO:0006357 ... Q12830 N/A
    798904 8ou2:B (1.6) BS02 W2W ? GO:0006357 ... Q12830 N/A
    798905 8ou3:A (1.47) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798906 8ou3:A (1.47) BS02 EF2 ? GO:0046872 ... A4TVL0 37902300
    798907 8ou3:B (1.47) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798908 8ou3:B (1.47) BS02 W1T ? GO:0046872 ... A4TVL0 37902300
    798909 8ou3:C (1.47) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798910 8ou3:C (1.47) BS02 EF2 ? GO:0046872 ... A4TVL0 37902300
    798911 8ou4:A (2.25) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798912 8ou4:A (2.25) BS02 W2F ? GO:0046872 ... A4TVL0 37902300
    798913 8ou4:B (2.25) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798914 8ou4:B (2.25) BS02 W2F ? GO:0046872 ... A4TVL0 37902300
    798915 8ou4:C (2.25) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798916 8ou5:A (2.3) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798917 8ou5:A (2.3) BS02 W1X ? GO:0046872 ... A4TVL0 37902300
    798918 8ou5:B (2.3) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798919 8ou5:B (2.3) BS02 W1X ? GO:0046872 ... A4TVL0 37902300
    798920 8ou5:C (2.3) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798921 8ou6:A (1.84) BS01 ZN ? N/A A4TVL0 37902300
    798922 8ou6:A (1.84) BS02 W26 ? N/A A4TVL0 37902300
    798923 8ou6:B (1.84) BS01 ZN ? N/A A4TVL0 37902300
    798924 8ou6:B (1.84) BS02 W26 ? N/A A4TVL0 37902300
    798925 8ou6:C (1.84) BS01 ZN ? N/A A4TVL0 37902300
    798926 8ou7:A (1.7) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798927 8ou7:A (1.7) BS02 W1F ? GO:0046872 ... A4TVL0 37902300
    798928 8ou7:B (1.7) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798929 8ou7:B (1.7) BS02 W1F ? GO:0046872 ... A4TVL0 37902300
    798930 8ou7:C (1.7) BS01 ZN ? GO:0046872 ... A4TVL0 37902300
    798931 8ou7:C (1.7) BS02 W1F ? GO:0046872 ... A4TVL0 37902300
    798932 8ou8:A (2.05) BS01 W0U 6.1.1.3 GO:0000166 ... P0A8M3 37335076
    798933 8ou8:A (2.05) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 37335076
    798934 8ou8:D (2.05) BS01 W0U 6.1.1.3 GO:0000166 ... P0A8M3 37335076
    798935 8ou8:D (2.05) BS02 ZN 6.1.1.3 GO:0000166 ... P0A8M3 37335076
    798936 8ou9:A (1.75) BS01 ZN ? N/A A4TVL0 37902300
    798937 8ou9:A (1.75) BS02 W1B ? N/A A4TVL0 37902300
    798938 8ou9:B (1.75) BS01 ZN ? N/A A4TVL0 37902300
    798939 8ou9:B (1.75) BS02 W1B ? N/A A4TVL0 37902300
    798940 8ou9:C (1.75) BS01 ZN ? N/A A4TVL0 37902300
    798941 8ou9:C (1.75) BS02 W1B ? N/A A4TVL0 37902300
    798942 8oua:A (1.85) BS01 ZN ? N/A A4TVL0 37902300
    798943 8oua:A (1.85) BS02 W0Z ? N/A A4TVL0 37902300
    798944 8oua:B (1.85) BS01 ZN ? N/A A4TVL0 37902300
    798945 8oua:B (1.85) BS02 W0Z ? N/A A4TVL0 37902300
    798946 8oua:C (1.85) BS01 ZN ? N/A A4TVL0 37902300
    798947 8oub:AAA (1.178) BS01 W1O 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    798948 8oub:AAA (1.178) BS02 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    798949 8oud:A (2.31) BS01 ALA ? GO:0001618 ... Q15758 38671230
    798950 8oud:A (2.31) BS02 Y01 ? GO:0001618 ... Q15758 38671230
    798951 8oud:B (2.31) BS01 ALA ? GO:0001618 ... Q15758 38671230
    798952 8oud:C (2.31) BS01 ALA ? GO:0001618 ... Q15758 38671230
    798953 8oud:C (2.31) BS02 Y01 ? GO:0001618 ... Q15758 38671230
    798954 8oue:C (2.7) BS01 rna 5.4.99.- GO:0000455 ... O60832 38272871
    798955 8oue:G (2.7) BS01 rna 5.4.99.- GO:0000455 ... O60832 38272871
    798956 8oue:I (2.7) BS01 rna ? GO:0000781 ... Q9NX24 38272871
    798957 8oue:J (2.7) BS01 rna ? GO:0001522 ... Q9NPE3 38272871
    798958 8oue:K (2.7) BS01 rna ? GO:0000781 ... Q9BUR4 38272871
    798959 8ouf:C (3.1) BS01 rna 5.4.99.- GO:0000455 ... O60832 38272871
    798960 8ouf:G (3.1) BS01 rna 5.4.99.- GO:0000455 ... O60832 38272871
    798961 8ouf:I (3.1) BS01 rna ? GO:0000781 ... Q9NX24 38272871
    798962 8ouf:J (3.1) BS01 rna ? GO:0001522 ... Q9NPE3 38272871
    798963 8ouf:K (3.1) BS01 rna ? GO:0000781 ... Q9BUR4 38272871
    798964 8ouh:A (2.62) BS01 ALA ? GO:0001618 ... Q15758 38671230
    798965 8ouh:B (2.62) BS01 ALA ? GO:0001618 ... Q15758 38671230
    798966 8ouj:A (3.5) BS01 ALA ? GO:0001618 ... Q15758 38671230
    798967 8ouj:B (3.5) BS01 ALA ? GO:0001618 ... Q15758 38671230
    798968 8ouk:A (1.8) BS01 GTP ? GO:0003924 ... A0A1Q9NLL0 N/A
    798969 8ouk:A (1.8) BS02 MG ? GO:0003924 ... A0A1Q9NLL0 N/A
    798970 8oum:A (2.67) BS01 GTP ? GO:0003924 ... A0A8J7ZFD1 N/A
    798971 8oum:A (2.67) BS02 MG ? GO:0003924 ... A0A8J7ZFD1 N/A
    798972 8oum:B (2.67) BS01 GTP ? GO:0003924 ... A0A8J7ZFD1 N/A
    798973 8oum:B (2.67) BS02 MG ? GO:0003924 ... A0A8J7ZFD1 N/A
    798974 8oum:C (2.67) BS01 GTP ? GO:0003924 ... A0A8J7ZFD1 N/A
    798975 8oum:C (2.67) BS02 MG ? GO:0003924 ... A0A8J7ZFD1 N/A
    798976 8oum:D (2.67) BS01 GTP ? GO:0003924 ... A0A8J7ZFD1 N/A
    798977 8oum:D (2.67) BS02 MG ? GO:0003924 ... A0A8J7ZFD1 N/A
    798978 8oum:E (2.67) BS01 GTP ? GO:0003924 ... A0A8J7ZFD1 N/A
    798979 8oum:E (2.67) BS02 MG ? GO:0003924 ... A0A8J7ZFD1 N/A
    798980 8oun:A (1.653) BS01 GDP ? GO:0003924 ... A0A8J7ZFD1 N/A
    798981 8oun:A (1.653) BS02 MG ? GO:0003924 ... A0A8J7ZFD1 N/A
    798982 8oun:B (1.653) BS01 GDP ? GO:0003924 ... A0A8J7ZFD1 N/A
    798983 8oun:B (1.653) BS02 MG ? GO:0003924 ... A0A8J7ZFD1 N/A
    798984 8ouo:A (3.0) BS01 Q7G ? GO:0005245 ... Q8NHX9 38815576
    798985 8ouo:A (3.0) BS02 W4E ? GO:0005245 ... Q8NHX9 38815576
    798986 8ouo:A (3.0) BS03 Y01 ? GO:0005245 ... Q8NHX9 38815576
    798987 8ouo:A (3.0) BS04 Y01 ? GO:0005245 ... Q8NHX9 38815576
    798988 8ouo:A (3.0) BS05 Y01 ? GO:0005245 ... Q8NHX9 38815576
    798989 8ouo:B (3.0) BS01 Q7G ? GO:0005245 ... Q8NHX9 38815576
    798990 8ouo:B (3.0) BS02 Y01 ? GO:0005245 ... Q8NHX9 38815576
    798991 8ouo:B (3.0) BS03 Y01 ? GO:0005245 ... Q8NHX9 38815576
    798992 8ouo:B (3.0) BS04 Y01 ? GO:0005245 ... Q8NHX9 38815576
    798993 8ouo:B (3.0) BS05 Q7G ? GO:0005245 ... Q8NHX9 38815576
    798994 8oup:A (1.7) BS01 HEM ? GO:0005344 ... Q3MQ26 37354606
    798995 8oup:B (1.7) BS01 HEM ? GO:0005344 ... Q3MQ26 37354606
    798996 8oup:C (1.7) BS01 HEM ? GO:0005344 ... Q3MQ26 37354606
    798997 8oup:D (1.7) BS01 HEM ? GO:0005344 ... Q3MQ26 37354606
    798998 8our:A (1.95) BS01 W38 2.7.11.25 GO:0004672 ... Q12852 37436942
    798999 8ous:A (2.2) BS01 W3I 2.7.11.25 GO:0004672 ... Q12852 37436942
    799000 8out:A (1.935) BS01 W3C 2.7.11.25 GO:0004672 ... Q12852 37436942

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218