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BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    796401 8ohv:AAA (1.5) BS01 VP5 ? GO:0016020 ... C1F2K5 38118176
    796402 8ohw:AAA (1.27) BS01 VON ? N/A Q63T97 38118176
    796403 8ohw:BBB (1.27) BS01 VON ? N/A Q63T97 38118176
    796404 8ohx:AAA (1.95) BS01 VON 3.2.1.31 GO:0004553 ... U4Q148 38118176
    796405 8ohx:BBB (1.95) BS01 VON 3.2.1.31 GO:0004553 ... U4Q148 38118176
    796406 8ohy:A (1.95) BS01 ZN ? GO:0004601 ... Q556V8 37593106
    796407 8ohy:A (1.95) BS02 HEM ? GO:0004601 ... Q556V8 37593106
    796408 8ohz:G (2.65) BS01 MG ? GO:0000502 ... P21243 38109686
    796409 8ohz:H (2.65) BS01 VOT 3.4.25.1 GO:0004298 ... P25043 38109686
    796410 8ohz:I (2.65) BS01 VOT ? GO:0000502 ... P25451 38109686
    796411 8ohz:K (2.65) BS01 VOT 3.4.25.1 GO:0004298 ... P30656 38109686
    796412 8ohz:K (2.65) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    796413 8ohz:L (2.65) BS01 VOT ? GO:0000502 ... P23724 38109686
    796414 8ohz:V (2.65) BS01 VOT 3.4.25.1 GO:0004298 ... P25043 38109686
    796415 8ohz:V (2.65) BS02 MG 3.4.25.1 GO:0004298 ... P25043 38109686
    796416 8ohz:W (2.65) BS01 VOT ? GO:0000502 ... P25451 38109686
    796417 8ohz:Y (2.65) BS01 VOT 3.4.25.1 GO:0004298 ... P30656 38109686
    796418 8ohz:Y (2.65) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    796419 8ohz:Z (2.65) BS01 VOT ? GO:0000502 ... P23724 38109686
    796420 8ohz:Z (2.65) BS02 MG ? GO:0000502 ... P23724 38109686
    796421 8oi1:G (2.95) BS01 MG ? GO:0000502 ... P21243 38109686
    796422 8oi1:H (2.95) BS01 VOX 3.4.25.1 GO:0004298 ... P25043 38109686
    796423 8oi1:K (2.95) BS01 VOX 3.4.25.1 GO:0004298 ... P30656 38109686
    796424 8oi1:K (2.95) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    796425 8oi1:L (2.95) BS01 VOX ? GO:0000502 ... P23724 38109686
    796426 8oi1:N (2.95) BS01 MG 3.4.25.1 GO:0000502 ... P38624 38109686
    796427 8oi1:V (2.95) BS01 VOX 3.4.25.1 GO:0004298 ... P25043 38109686
    796428 8oi1:V (2.95) BS02 MG 3.4.25.1 GO:0004298 ... P25043 38109686
    796429 8oi1:W (2.95) BS01 VOX ? GO:0000502 ... P25451 38109686
    796430 8oi1:Y (2.95) BS01 VOX 3.4.25.1 GO:0004298 ... P30656 38109686
    796431 8oi1:Y (2.95) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    796432 8oi1:Z (2.95) BS01 VOX ? GO:0000502 ... P23724 38109686
    796433 8oi1:Z (2.95) BS02 MG ? GO:0000502 ... P23724 38109686
    796434 8oi3:A (1.5) BS01 AYE ? GO:0006508 ... A0A2U9K2V6 N/A
    796435 8oi3:B (1.5) BS01 AYE ? GO:0006508 ... A0A2U9K2V6 N/A
    796436 8oi6:A (3.59) BS01 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    796437 8oi6:A (3.59) BS02 ADP 3.6.4.- GO:0005515 ... P60712 37749275
    796438 8oi6:B (3.59) BS01 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    796439 8oi6:B (3.59) BS02 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    796440 8oi6:B (3.59) BS03 ADP 3.6.4.- GO:0005515 ... P60712 37749275
    796441 8oi6:C (3.59) BS01 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    796442 8oi6:C (3.59) BS02 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    796443 8oi6:C (3.59) BS03 ADP 3.6.4.- GO:0005515 ... P60712 37749275
    796444 8oi6:D (3.59) BS01 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    796445 8oi6:D (3.59) BS02 ADP 3.6.4.- GO:0005515 ... P60712 37749275
    796446 8oi7:A (1.85) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796447 8oi7:A (1.85) BS02 MG ? GO:0005829 ... A2FTT0 37482279
    796448 8oi7:B (1.85) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796449 8oi7:B (1.85) BS02 MG ? GO:0005829 ... A2FTT0 37482279
    796450 8oi8:A (2.28) BS01 ADP 3.6.4.- GO:0000079 ... P60709 37749275
    796451 8oi8:B (2.28) BS01 ADP 3.6.4.- GO:0000079 ... P60709 37749275
    796452 8oi8:C (2.28) BS01 ADP 3.6.4.- GO:0000079 ... P60709 37749275
    796453 8oi8:D (2.28) BS01 ADP 3.6.4.- GO:0000079 ... P60709 37749275
    796454 8oi8:E (2.28) BS01 ADP 3.6.4.- GO:0000079 ... P60709 37749275
    796455 8oi9:A (1.95) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796456 8oi9:A (1.95) BS02 38T ? GO:0005829 ... A2FTT0 37482279
    796457 8oi9:A (1.95) BS03 PIN ? GO:0005829 ... A2FTT0 37482279
    796458 8oi9:A (1.95) BS04 MG ? GO:0005829 ... A2FTT0 37482279
    796459 8oi9:B (1.95) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796460 8oi9:B (1.95) BS02 38T ? GO:0005829 ... A2FTT0 37482279
    796461 8oi9:B (1.95) BS03 MG ? GO:0005829 ... A2FTT0 37482279
    796462 8oia:A (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796463 8oia:A (2.3) BS02 RIB ? GO:0005829 ... A2FTT0 37482279
    796464 8oia:B (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796465 8oia:B (2.3) BS02 RIB ? GO:0005829 ... A2FTT0 37482279
    796466 8oia:C (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796467 8oia:C (2.3) BS02 RIB ? GO:0005829 ... A2FTT0 37482279
    796468 8oia:D (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796469 8oia:D (2.3) BS02 RIB ? GO:0005829 ... A2FTT0 37482279
    796470 8oib:A (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796471 8oib:B (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796472 8oib:C (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796473 8oib:D (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796474 8oic:A (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796475 8oic:B (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796476 8oic:C (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796477 8oic:D (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796478 8oic:E (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796479 8oic:F (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796480 8oic:G (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796481 8oic:H (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    796482 8oid:A (2.3) BS01 ADP 3.6.4.- GO:0000079 ... P60709 37749275
    796483 8oid:B (2.3) BS01 ADP 3.6.4.- GO:0000079 ... P60709 37749275
    796484 8oid:C (2.3) BS01 ADP 3.6.4.- GO:0000079 ... P60709 37749275
    796485 8oid:D (2.3) BS01 ADP 3.6.4.- GO:0000079 ... P60709 37749275
    796486 8oid:E (2.3) BS01 ADP 3.6.4.- GO:0000079 ... P60709 37749275
    796487 8oie:A (2.35) BS01 S5Q 1.18.6.1 GO:0005524 ... D5ANJ7 38062208
    796488 8oie:A (2.35) BS02 CLF 1.18.6.1 GO:0005524 ... D5ANJ7 38062208
    796489 8oie:C (2.35) BS01 CLF 1.18.6.1 GO:0009399 ... D5ANJ9 38062208
    796490 8oie:D (2.35) BS01 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796491 8oie:D (2.35) BS02 AF3 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796492 8oie:D (2.35) BS03 SF4 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796493 8oie:D (2.35) BS04 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796494 8oie:E (2.35) BS01 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796495 8oie:E (2.35) BS02 SF4 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796496 8oie:E (2.35) BS03 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796497 8oie:E (2.35) BS04 AF3 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796498 8oie:F (2.35) BS01 S5Q 1.18.6.1 GO:0005524 ... D5ANJ7 38062208
    796499 8oie:F (2.35) BS02 CLF 1.18.6.1 GO:0005524 ... D5ANJ7 38062208
    796500 8oie:H (2.35) BS01 CLF 1.18.6.1 GO:0009399 ... D5ANJ9 38062208
    796501 8oie:I (2.35) BS01 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796502 8oie:I (2.35) BS02 AF3 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796503 8oie:I (2.35) BS03 SF4 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796504 8oie:I (2.35) BS04 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796505 8oie:J (2.35) BS01 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796506 8oie:J (2.35) BS02 SF4 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796507 8oie:J (2.35) BS03 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796508 8oie:J (2.35) BS04 AF3 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    796509 8oif:A (3.5) BS01 AMP 6.2.1.- GO:0004842 ... P41226 38042859
    796510 8oih:AAA (1.86) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    796511 8oih:AAA (1.86) BS02 OXY 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    796512 8oih:BBB (1.86) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    796513 8oih:CCC (1.86) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    796514 8oih:DDD (1.86) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    796515 8oih:DDD (1.86) BS02 OXY 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    796516 8oij:A (2.0) BS01 peptide ? N/A Q23972 37523566
    796517 8oij:A (2.0) BS02 peptide ? N/A Q23972 37523566
    796518 8oij:B (2.0) BS01 peptide ? N/A Q23972 37523566
    796519 8oij:B (2.0) BS02 peptide ? N/A Q23972 37523566
    796520 8oin:AB (3.6) BS01 rna ? GO:0003735 ... F1SG95 37141370
    796521 8oin:AC (3.6) BS01 rna ? GO:0005739 ... A0A287ANU4 37141370
    796522 8oin:AD (3.6) BS01 rna ? GO:0005739 ... A0A8D1P8R7 37141370
    796523 8oin:AD (3.6) BS02 rna ? GO:0005739 ... A0A8D1P8R7 37141370
    796524 8oin:AE (3.6) BS01 rna ? GO:0003735 ... A0A5K1V0G5 37141370
    796525 8oin:AF (3.6) BS01 rna ? GO:0000028 ... A0A286ZJ25 37141370
    796526 8oin:AH (3.6) BS01 rna ? GO:0005739 ... F1RUU2 37141370
    796527 8oin:AJ (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL52 37141370
    796528 8oin:AK (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL53 37141370
    796529 8oin:AL (3.6) BS01 rna ? GO:0003735 ... A0A287AKS1 37141370
    796530 8oin:AM (3.6) BS01 rna ? GO:0003735 ... A0A480JTD7 37141370
    796531 8oin:AN (3.6) BS01 rna ? GO:0003735 ... A0A8D1IXU1 37141370
    796532 8oin:AO (3.6) BS01 rna ? GO:0003735 ... Q767K8 37141370
    796533 8oin:AO (3.6) BS02 ZN ? GO:0003735 ... Q767K8 37141370
    796534 8oin:AP (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL54 37141370
    796535 8oin:AP (3.6) BS02 FES ? GO:0003735 ... A0A0M3KL54 37141370
    796536 8oin:AQ (3.6) BS01 rna ? GO:0003735 ... A0A286ZNB3 37141370
    796537 8oin:AS (3.6) BS01 rna ? GO:0003735 ... A0A287AEW3 37141370
    796538 8oin:AT (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL55 37141370
    796539 8oin:AT (3.6) BS02 FES ? GO:0003735 ... A0A0M3KL55 37141370
    796540 8oin:AU (3.6) BS01 rna ? GO:0005763 ... A0A287AY01 37141370
    796541 8oin:AV (3.6) BS01 rna ? N/A A0A5G2R1I0 37141370
    796542 8oin:AX (3.6) BS01 rna ? GO:0005654 ... A0A8D1XNL0 37141370
    796543 8oin:AX (3.6) BS02 ATP ? GO:0005654 ... A0A8D1XNL0 37141370
    796544 8oin:AX (3.6) BS03 GDP ? GO:0005654 ... A0A8D1XNL0 37141370
    796545 8oin:AZ (3.6) BS01 rna ? GO:0005739 ... A0A4X1V2H3 37141370
    796546 8oin:Aa (3.6) BS01 rna ? GO:0003747 ... O75570 37141370
    796547 8oin:Aa (3.6) BS02 rna ? GO:0003747 ... O75570 37141370
    796548 8oin:Aa (3.6) BS03 rna ? GO:0003747 ... O75570 37141370
    796549 8oin:Aa (3.6) BS04 rna ? GO:0003747 ... O75570 37141370
    796550 8oin:Ab (3.6) BS01 rna ? GO:0003735 ... F1S001 37141370
    796551 8oin:Ab (3.6) BS02 MG ? GO:0003735 ... F1S001 37141370
    796552 8oin:Ac (3.6) BS01 rna ? GO:0005739 ... A0A4X1SZV4 37141370
    796553 8oin:Ad (3.6) BS01 rna ? GO:0003723 ... F1SU66 37141370
    796554 8oin:Ad (3.6) BS02 rna ? GO:0003723 ... F1SU66 37141370
    796555 8oin:Ag (3.6) BS01 rna ? GO:0003723 ... I3LU08 37141370
    796556 8oin:Ag (3.6) BS02 rna ? GO:0003723 ... I3LU08 37141370
    796557 8oin:Ai (3.6) BS01 rna ? GO:0003735 ... A0A286ZJJ6 37141370
    796558 8oin:Aj (3.6) BS01 rna ? GO:0003735 ... A0A287AVS9 37141370
    796559 8oin:B1 (3.6) BS01 peptide ? GO:0003735 ... A0A8D0VGD9 37141370
    796560 8oin:B1 (3.6) BS02 peptide ? GO:0003735 ... A0A8D0VGD9 37141370
    796561 8oin:BA (3.6) BS01 rna ? GO:0003735 ... A0A4X1TXR4 37141370
    796562 8oin:BB (3.6) BS01 rna ? GO:0003735 ... A0A480JJI1 37141370
    796563 8oin:BC (3.6) BS01 rna ? GO:0003723 ... F1RHJ1 37141370
    796564 8oin:BD (3.6) BS01 rna ? GO:0003735 ... A0A4X1U0F6 37141370
    796565 8oin:BE (3.6) BS01 rna ? GO:0003735 ... A0A286ZTW8 37141370
    796566 8oin:BF (3.6) BS01 rna ? GO:0003735 ... F1SGC7 37141370
    796567 8oin:BG (3.6) BS01 rna ? GO:0003735 ... A0A8D0VJF4 37141370
    796568 8oin:BH (3.6) BS01 rna ? GO:0003735 ... I3LTC4 37141370
    796569 8oin:BH (3.6) BS02 ZN ? GO:0003735 ... I3LTC4 37141370
    796570 8oin:BI (3.6) BS01 rna ? GO:0003735 ... A0A4X1TLP9 37141370
    796571 8oin:BJ (3.6) BS01 rna ? GO:0003735 ... A0A8D1JE64 37141370
    796572 8oin:BK (3.6) BS01 rna ? GO:0003735 ... A0A5G2QZK0 37141370
    796573 8oin:BL (3.6) BS01 rna ? GO:0003723 ... A0A287A143 37141370
    796574 8oin:BM (3.6) BS01 rna ? GO:0003735 ... A0A140UHW4 37141370
    796575 8oin:BN (3.6) BS01 rna ? GO:0003735 ... A0A287B9C4 37141370
    796576 8oin:BO (3.6) BS01 rna ? GO:0003735 ... I3LR45 37141370
    796577 8oin:BP (3.6) BS01 peptide ? GO:0005840 ... F1RWJ0 37141370
    796578 8oin:BP (3.6) BS02 peptide ? GO:0005840 ... F1RWJ0 37141370
    796579 8oin:BP (3.6) BS03 peptide ? GO:0005840 ... F1RWJ0 37141370
    796580 8oin:BP (3.6) BS04 peptide ? GO:0005840 ... F1RWJ0 37141370
    796581 8oin:BP (3.6) BS05 rna ? GO:0005840 ... F1RWJ0 37141370
    796582 8oin:BP (3.6) BS06 FES ? GO:0005840 ... F1RWJ0 37141370
    796583 8oin:BQ (3.6) BS01 rna ? GO:0003735 ... F1RU54 37141370
    796584 8oin:BR (3.6) BS01 rna ? GO:0003729 ... K7GP19 37141370
    796585 8oin:BS (3.6) BS01 rna ? GO:0003735 ... A0A287BMZ6 37141370
    796586 8oin:BT (3.6) BS01 rna ? GO:0003735 ... A0A8D0HMG9 37141370
    796587 8oin:BU (3.6) BS01 rna ? GO:0003735 ... F1RI89 37141370
    796588 8oin:BV (3.6) BS01 rna ? GO:0003735 ... F1RMQ4 37141370
    796589 8oin:BW (3.6) BS01 rna ? GO:0003735 ... A0A4X1VX01 37141370
    796590 8oin:BW (3.6) BS02 rna ? GO:0003735 ... A0A4X1VX01 37141370
    796591 8oin:BX (3.6) BS01 rna ? GO:0003735 ... I3LNJ0 37141370
    796592 8oin:BY (3.6) BS01 rna ? GO:0003735 ... A0A286ZU56 37141370
    796593 8oin:BZ (3.6) BS01 rna ? GO:0003723 ... F1RY70 37141370
    796594 8oin:Ba (3.6) BS01 rna ? GO:0003735 ... F1S9B7 37141370
    796595 8oin:Bc (3.6) BS01 rna ? N/A I3LN63 37141370
    796596 8oin:Be (3.6) BS01 rna ? GO:0003735 ... A0A287BP93 37141370
    796597 8oin:Bg (3.6) BS01 rna ? GO:0005634 ... A0A286ZXA6 37141370
    796598 8oin:Bh (3.6) BS01 rna ? GO:0003735 ... F1RRH6 37141370
    796599 8oin:Bh (3.6) BS02 FES ? GO:0003735 ... F1RRH6 37141370
    796600 8oin:Bi (3.6) BS01 rna ? GO:0003735 ... A0A480QIM3 37141370

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218