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BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    790801 8j6z:B (2.79) BS29 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790802 8j6z:B (2.79) BS30 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790803 8j6z:B (2.79) BS31 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790804 8j6z:B (2.79) BS32 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790805 8j6z:B (2.79) BS33 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790806 8j6z:B (2.79) BS34 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790807 8j6z:B (2.79) BS35 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790808 8j6z:B (2.79) BS36 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790809 8j6z:B (2.79) BS37 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790810 8j6z:B (2.79) BS38 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790811 8j6z:B (2.79) BS39 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790812 8j6z:B (2.79) BS40 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790813 8j6z:B (2.79) BS41 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790814 8j6z:B (2.79) BS42 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790815 8j6z:B (2.79) BS43 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790816 8j6z:B (2.79) BS44 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790817 8j6z:B (2.79) BS45 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    790818 8j6z:C (2.79) BS01 SF4 1.97.1.12 GO:0003729 ... P62090 37936349
    790819 8j6z:C (2.79) BS02 SF4 1.97.1.12 GO:0003729 ... P62090 37936349
    790820 8j6z:F (2.79) BS01 CLA ? GO:0003729 ... Q9SHE8 37936349
    790821 8j6z:F (2.79) BS02 CLA ? GO:0003729 ... Q9SHE8 37936349
    790822 8j6z:F (2.79) BS03 CLA ? GO:0003729 ... Q9SHE8 37936349
    790823 8j6z:F (2.79) BS04 CLA ? GO:0003729 ... Q9SHE8 37936349
    790824 8j6z:G (2.79) BS01 CLA ? GO:0005515 ... Q9S7N7 37936349
    790825 8j6z:G (2.79) BS02 CLA ? GO:0005515 ... Q9S7N7 37936349
    790826 8j6z:G (2.79) BS03 CLA ? GO:0005515 ... Q9S7N7 37936349
    790827 8j6z:G (2.79) BS04 CLA ? GO:0005515 ... Q9S7N7 37936349
    790828 8j6z:H (2.79) BS01 CLA ? GO:0005634 ... Q9SUI6 37936349
    790829 8j6z:I (2.79) BS01 CLA ? GO:0003674 ... P56768 37936349
    790830 8j6z:J (2.79) BS01 CLA ? GO:0003674 ... P56769 37936349
    790831 8j6z:J (2.79) BS02 CLA ? GO:0003674 ... P56769 37936349
    790832 8j6z:K (2.79) BS01 CLA ? GO:0005634 ... Q9SUI5 37936349
    790833 8j6z:K (2.79) BS02 CLA ? GO:0005634 ... Q9SUI5 37936349
    790834 8j6z:K (2.79) BS03 CLA ? GO:0005634 ... Q9SUI5 37936349
    790835 8j6z:K (2.79) BS04 CLA ? GO:0005634 ... Q9SUI5 37936349
    790836 8j6z:L (2.79) BS01 CLA ? GO:0003729 ... Q9SUI4 37936349
    790837 8j6z:L (2.79) BS02 CLA ? GO:0003729 ... Q9SUI4 37936349
    790838 8j6z:L (2.79) BS03 CLA ? GO:0003729 ... Q9SUI4 37936349
    790839 8j6z:L (2.79) BS04 CLA ? GO:0003729 ... Q9SUI4 37936349
    790840 8j6z:L (2.79) BS05 CLA ? GO:0003729 ... Q9SUI4 37936349
    790841 8j6z:L (2.79) BS06 CLA ? GO:0003729 ... Q9SUI4 37936349
    790842 8j6z:O (2.79) BS01 CLA ? GO:0003729 ... Q949Q5 37936349
    790843 8j6z:O (2.79) BS02 CLA ? GO:0003729 ... Q949Q5 37936349
    790844 8j6z:O (2.79) BS03 CLA ? GO:0003729 ... Q949Q5 37936349
    790845 8j6z:O (2.79) BS04 CHL ? GO:0003729 ... Q949Q5 37936349
    790846 8j6z:x (2.79) BS01 CHL ? GO:0003729 ... P0CJ48 37936349
    790847 8j6z:x (2.79) BS02 CHL ? GO:0003729 ... P0CJ48 37936349
    790848 8j6z:x (2.79) BS03 CLA ? GO:0003729 ... P0CJ48 37936349
    790849 8j6z:x (2.79) BS04 CHL ? GO:0003729 ... P0CJ48 37936349
    790850 8j6z:x (2.79) BS05 CLA ? GO:0003729 ... P0CJ48 37936349
    790851 8j6z:x (2.79) BS06 CLA ? GO:0003729 ... P0CJ48 37936349
    790852 8j6z:x (2.79) BS07 CHL ? GO:0003729 ... P0CJ48 37936349
    790853 8j6z:x (2.79) BS08 CLA ? GO:0003729 ... P0CJ48 37936349
    790854 8j6z:x (2.79) BS09 CHL ? GO:0003729 ... P0CJ48 37936349
    790855 8j6z:x (2.79) BS10 CLA ? GO:0003729 ... P0CJ48 37936349
    790856 8j6z:x (2.79) BS11 CLA ? GO:0003729 ... P0CJ48 37936349
    790857 8j6z:x (2.79) BS12 CLA ? GO:0003729 ... P0CJ48 37936349
    790858 8j6z:x (2.79) BS13 CLA ? GO:0003729 ... P0CJ48 37936349
    790859 8j6z:x (2.79) BS14 CHL ? GO:0003729 ... P0CJ48 37936349
    790860 8j6z:y (2.79) BS01 CLA ? GO:0003729 ... P0CJ48 37936349
    790861 8j6z:y (2.79) BS02 CLA ? GO:0003729 ... P0CJ48 37936349
    790862 8j6z:y (2.79) BS03 CHL ? GO:0003729 ... P0CJ48 37936349
    790863 8j6z:y (2.79) BS04 CLA ? GO:0003729 ... P0CJ48 37936349
    790864 8j6z:y (2.79) BS05 CHL ? GO:0003729 ... P0CJ48 37936349
    790865 8j6z:y (2.79) BS06 CHL ? GO:0003729 ... P0CJ48 37936349
    790866 8j6z:y (2.79) BS07 CLA ? GO:0003729 ... P0CJ48 37936349
    790867 8j6z:y (2.79) BS08 CLA ? GO:0003729 ... P0CJ48 37936349
    790868 8j6z:y (2.79) BS09 CLA ? GO:0003729 ... P0CJ48 37936349
    790869 8j6z:y (2.79) BS10 CHL ? GO:0003729 ... P0CJ48 37936349
    790870 8j6z:y (2.79) BS11 CLA ? GO:0003729 ... P0CJ48 37936349
    790871 8j6z:y (2.79) BS12 CHL ? GO:0003729 ... P0CJ48 37936349
    790872 8j6z:y (2.79) BS13 CHL ? GO:0003729 ... P0CJ48 37936349
    790873 8j6z:y (2.79) BS14 CLA ? GO:0003729 ... P0CJ48 37936349
    790874 8j6z:y (2.79) BS15 CHL ? GO:0003729 ... P0CJ48 37936349
    790875 8j6z:y (2.79) BS16 CHL ? GO:0003729 ... P0CJ48 37936349
    790876 8j6z:z (2.79) BS01 CHL ? GO:0005739 ... Q9SHR7 37936349
    790877 8j6z:z (2.79) BS02 CLA ? GO:0005739 ... Q9SHR7 37936349
    790878 8j6z:z (2.79) BS03 CLA ? GO:0005739 ... Q9SHR7 37936349
    790879 8j6z:z (2.79) BS04 CLA ? GO:0005739 ... Q9SHR7 37936349
    790880 8j6z:z (2.79) BS05 CLA ? GO:0005739 ... Q9SHR7 37936349
    790881 8j6z:z (2.79) BS06 CLA ? GO:0005739 ... Q9SHR7 37936349
    790882 8j6z:z (2.79) BS07 CHL ? GO:0005739 ... Q9SHR7 37936349
    790883 8j6z:z (2.79) BS08 CHL ? GO:0005739 ... Q9SHR7 37936349
    790884 8j6z:z (2.79) BS09 CHL ? GO:0005739 ... Q9SHR7 37936349
    790885 8j6z:z (2.79) BS10 CHL ? GO:0005739 ... Q9SHR7 37936349
    790886 8j6z:z (2.79) BS11 CLA ? GO:0005739 ... Q9SHR7 37936349
    790887 8j6z:z (2.79) BS12 CLA ? GO:0005739 ... Q9SHR7 37936349
    790888 8j6z:z (2.79) BS13 CHL ? GO:0005739 ... Q9SHR7 37936349
    790889 8j6z:z (2.79) BS14 CHL ? GO:0005739 ... Q9SHR7 37936349
    790890 8j70:A (1.85) BS01 dna ? GO:0003677 ... Q13342 N/A
    790891 8j70:A (1.85) BS02 dna ? GO:0003677 ... Q13342 N/A
    790892 8j70:A (1.85) BS03 SEY ? GO:0003677 ... Q13342 N/A
    790893 8j70:B (1.85) BS01 dna ? GO:0003677 ... Q13342 N/A
    790894 8j70:B (1.85) BS02 dna ? GO:0003677 ... Q13342 N/A
    790895 8j71:A (1.85) BS01 dna ? GO:0003677 ... Q13342 N/A
    790896 8j71:A (1.85) BS02 dna ? GO:0003677 ... Q13342 N/A
    790897 8j71:B (1.85) BS01 dna ? GO:0003677 ... Q13342 N/A
    790898 8j71:B (1.85) BS02 dna ? GO:0003677 ... Q13342 N/A
    790899 8j72:A (3.16) BS01 rna 2.3.2.27 N/A Q1PSW8 38036331
    790900 8j72:B (3.16) BS01 rna 2.3.2.27 N/A Q1PSW8 38036331
    790901 8j74:A (3.6) BS01 AV0 ? GO:0001701 ... Q9GZV3 38589607
    790902 8j74:A (3.6) BS02 HC6 ? GO:0001701 ... Q9GZV3 38589607
    790903 8j74:A (3.6) BS03 AV0 ? GO:0001701 ... Q9GZV3 38589607
    790904 8j74:B (3.6) BS01 AV0 ? GO:0001701 ... Q9GZV3 38589607
    790905 8j74:B (3.6) BS02 AV0 ? GO:0001701 ... Q9GZV3 38589607
    790906 8j74:B (3.6) BS03 HC6 ? GO:0001701 ... Q9GZV3 38589607
    790907 8j75:A (3.6) BS01 HC6 ? GO:0001701 ... Q9GZV3 38589607
    790908 8j77:A (3.7) BS01 CHT ? GO:0001701 ... Q9GZV3 38589607
    790909 8j78:C (3.88) BS01 BTI 6.4.1.4 GO:0002169 ... Q96RQ3 N/A
    790910 8j78:D (3.88) BS01 BTI 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    790911 8j78:F (3.88) BS01 BTI 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    790912 8j78:I (3.88) BS01 BTI 6.4.1.4 GO:0002169 ... Q96RQ3 N/A
    790913 8j78:J (3.88) BS01 BTI 6.4.1.4 GO:0002169 ... Q9HCC0 N/A
    790914 8j79:A (1.99) BS01 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790915 8j79:A (1.99) BS02 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790916 8j79:A (1.99) BS03 FAD 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790917 8j79:A (1.99) BS04 CO3 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790918 8j79:A (1.99) BS05 CA 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790919 8j79:A (1.99) BS06 CA 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790920 8j79:A (1.99) BS07 141 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790921 8j79:B (1.99) BS01 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790922 8j79:B (1.99) BS02 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790923 8j79:B (1.99) BS03 FAD 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790924 8j79:B (1.99) BS04 CO3 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790925 8j79:B (1.99) BS05 CA 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790926 8j79:B (1.99) BS06 CA 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790927 8j79:B (1.99) BS07 141 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    790928 8j7a:1 (3.06) BS01 CHL ? GO:0003729 ... Q01667 37936349
    790929 8j7a:1 (3.06) BS02 CLA ? GO:0003729 ... Q01667 37936349
    790930 8j7a:1 (3.06) BS03 CLA ? GO:0003729 ... Q01667 37936349
    790931 8j7a:1 (3.06) BS04 CLA ? GO:0003729 ... Q01667 37936349
    790932 8j7a:1 (3.06) BS05 CLA ? GO:0003729 ... Q01667 37936349
    790933 8j7a:1 (3.06) BS06 CLA ? GO:0003729 ... Q01667 37936349
    790934 8j7a:1 (3.06) BS07 CLA ? GO:0003729 ... Q01667 37936349
    790935 8j7a:1 (3.06) BS08 CLA ? GO:0003729 ... Q01667 37936349
    790936 8j7a:2 (3.06) BS01 CHL ? GO:0005515 ... Q9SYW8 37936349
    790937 8j7a:2 (3.06) BS02 CLA ? GO:0005515 ... Q9SYW8 37936349
    790938 8j7a:2 (3.06) BS03 CLA ? GO:0005515 ... Q9SYW8 37936349
    790939 8j7a:2 (3.06) BS04 CHL ? GO:0005515 ... Q9SYW8 37936349
    790940 8j7a:2 (3.06) BS05 CHL ? GO:0005515 ... Q9SYW8 37936349
    790941 8j7a:2 (3.06) BS06 CLA ? GO:0005515 ... Q9SYW8 37936349
    790942 8j7a:2 (3.06) BS07 CLA ? GO:0005515 ... Q9SYW8 37936349
    790943 8j7a:2 (3.06) BS08 CHL ? GO:0005515 ... Q9SYW8 37936349
    790944 8j7a:2 (3.06) BS09 CLA ? GO:0005515 ... Q9SYW8 37936349
    790945 8j7a:2 (3.06) BS10 CHL ? GO:0005515 ... Q9SYW8 37936349
    790946 8j7a:2 (3.06) BS11 CLA ? GO:0005515 ... Q9SYW8 37936349
    790947 8j7a:2 (3.06) BS12 CLA ? GO:0005515 ... Q9SYW8 37936349
    790948 8j7a:2 (3.06) BS13 CLA ? GO:0005515 ... Q9SYW8 37936349
    790949 8j7a:2 (3.06) BS14 CLA ? GO:0005515 ... Q9SYW8 37936349
    790950 8j7a:3 (3.06) BS01 CLA ? GO:0003729 ... Q9SY97 37936349
    790951 8j7a:3 (3.06) BS02 CHL ? GO:0003729 ... Q9SY97 37936349
    790952 8j7a:3 (3.06) BS03 CLA ? GO:0003729 ... Q9SY97 37936349
    790953 8j7a:3 (3.06) BS04 CLA ? GO:0003729 ... Q9SY97 37936349
    790954 8j7a:3 (3.06) BS05 CLA ? GO:0003729 ... Q9SY97 37936349
    790955 8j7a:3 (3.06) BS06 CLA ? GO:0003729 ... Q9SY97 37936349
    790956 8j7a:3 (3.06) BS07 CLA ? GO:0003729 ... Q9SY97 37936349
    790957 8j7a:3 (3.06) BS08 CLA ? GO:0003729 ... Q9SY97 37936349
    790958 8j7a:3 (3.06) BS09 CLA ? GO:0003729 ... Q9SY97 37936349
    790959 8j7a:3 (3.06) BS10 CHL ? GO:0003729 ... Q9SY97 37936349
    790960 8j7a:3 (3.06) BS11 CLA ? GO:0003729 ... Q9SY97 37936349
    790961 8j7a:3 (3.06) BS12 CLA ? GO:0003729 ... Q9SY97 37936349
    790962 8j7a:3 (3.06) BS13 CLA ? GO:0003729 ... Q9SY97 37936349
    790963 8j7a:3 (3.06) BS14 CLA ? GO:0003729 ... Q9SY97 37936349
    790964 8j7a:3 (3.06) BS15 CLA ? GO:0003729 ... Q9SY97 37936349
    790965 8j7a:4 (3.06) BS01 CLA ? GO:0003729 ... P27521 37936349
    790966 8j7a:4 (3.06) BS02 CHL ? GO:0003729 ... P27521 37936349
    790967 8j7a:4 (3.06) BS03 CLA ? GO:0003729 ... P27521 37936349
    790968 8j7a:4 (3.06) BS04 CLA ? GO:0003729 ... P27521 37936349
    790969 8j7a:4 (3.06) BS05 CHL ? GO:0003729 ... P27521 37936349
    790970 8j7a:4 (3.06) BS06 CHL ? GO:0003729 ... P27521 37936349
    790971 8j7a:4 (3.06) BS07 CLA ? GO:0003729 ... P27521 37936349
    790972 8j7a:4 (3.06) BS08 CLA ? GO:0003729 ... P27521 37936349
    790973 8j7a:4 (3.06) BS09 CLA ? GO:0003729 ... P27521 37936349
    790974 8j7a:4 (3.06) BS10 CHL ? GO:0003729 ... P27521 37936349
    790975 8j7a:4 (3.06) BS11 CLA ? GO:0003729 ... P27521 37936349
    790976 8j7a:A (3.06) BS01 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790977 8j7a:A (3.06) BS02 CL0 1.97.1.12 GO:0000287 ... P56766 37936349
    790978 8j7a:A (3.06) BS03 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790979 8j7a:A (3.06) BS04 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790980 8j7a:A (3.06) BS05 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790981 8j7a:A (3.06) BS06 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790982 8j7a:A (3.06) BS07 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790983 8j7a:A (3.06) BS08 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790984 8j7a:A (3.06) BS09 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790985 8j7a:A (3.06) BS10 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790986 8j7a:A (3.06) BS11 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790987 8j7a:A (3.06) BS12 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790988 8j7a:A (3.06) BS13 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790989 8j7a:A (3.06) BS14 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790990 8j7a:A (3.06) BS15 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790991 8j7a:A (3.06) BS16 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790992 8j7a:A (3.06) BS17 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790993 8j7a:A (3.06) BS18 SF4 1.97.1.12 GO:0000287 ... P56766 37936349
    790994 8j7a:A (3.06) BS19 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790995 8j7a:A (3.06) BS20 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790996 8j7a:A (3.06) BS21 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790997 8j7a:A (3.06) BS22 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790998 8j7a:A (3.06) BS23 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    790999 8j7a:A (3.06) BS24 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    791000 8j7a:A (3.06) BS25 CLA 1.97.1.12 GO:0000287 ... P56766 37936349

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218