Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    6801 1d1y:A (2.2) BS01 HEM 1.14.13.39 GO:0004517 ... P29473 11331290
    6802 1d1y:A (2.2) BS02 3BT 1.14.13.39 GO:0004517 ... P29473 11331290
    6803 1d1y:A (2.2) BS03 ZN 1.14.13.39 GO:0004517 ... P29473 11331290
    6804 1d1y:B (2.2) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11331290
    6805 1d1y:B (2.2) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11331290
    6806 1d1y:B (2.2) BS03 3BT 1.14.13.39 GO:0004517 ... P29473 11331290
    6807 1d2a:B (1.9) BS01 ADE 3.1.3.2
    3.1.3.48
    GO:0003993 ... P40347 10684601
    6808 1d2e:A (1.94) BS01 GDP ? GO:0003746 ... P49410 10715211 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1uM
    6809 1d2e:B (1.94) BS01 GDP ? GO:0003746 ... P49410 10715211 MOAD: Kd=1uM
    6810 1d2e:C (1.94) BS01 GDP ? GO:0003746 ... P49410 10715211 MOAD: Kd=1uM
    6811 1d2e:D (1.94) BS01 GDP ? GO:0003746 ... P49410 10715211 MOAD: Kd=1uM
    6812 1d2f:A (2.5) BS01 PLP 4.4.1.13 GO:0003824 ... P23256 10698925
    6813 1d2f:B (2.5) BS01 PLP 4.4.1.13 GO:0003824 ... P23256 10698925
    6814 1d2h:A (3.0) BS01 SAH 2.1.1.20 GO:0005542 ... P13255 10756111
    6815 1d2h:B (3.0) BS01 SAH 2.1.1.20 GO:0005542 ... P13255 10756111
    6816 1d2h:C (3.0) BS01 SAH 2.1.1.20 GO:0005542 ... P13255 10756111
    6817 1d2h:D (3.0) BS01 SAH 2.1.1.20 GO:0005542 ... P13255 10756111
    6818 1d2i:A (1.7) BS01 dna 3.1.21.4 GO:0000287 ... Q45488 10655616
    6819 1d2i:A (1.7) BS02 dna 3.1.21.4 GO:0000287 ... Q45488 10655616
    6820 1d2i:A (1.7) BS03 MG 3.1.21.4 GO:0000287 ... Q45488 10655616
    6821 1d2i:B (1.7) BS01 dna 3.1.21.4 GO:0000287 ... Q45488 10655616
    6822 1d2i:B (1.7) BS02 dna 3.1.21.4 GO:0000287 ... Q45488 10655616
    6823 1d2i:B (1.7) BS03 MG 3.1.21.4 GO:0000287 ... Q45488 10655616
    6824 1d2j:A (-1.00) BS01 CA ? N/A P01130 10704205
    6825 1d2l:A (-1.00) BS01 CA ? N/A Q07954 10652313
    6826 1d2n:A (1.75) BS01 ANP 3.6.4.6 GO:0005524 ... P18708 9727495
    6827 1d2s:A (1.55) BS01 CA ? N/A P04278 10675319
    6828 1d2s:A (1.55) BS02 DHT ? N/A P04278 10675319 PDBbind: -logKd/Ki=9.74, Kd=0.182nM
    BindingDB: IC50=3.8nM, Kd=0.182000nM
    6829 1d2t:A (1.9) BS01 SO4 3.1.3.2 GO:0003993 ... Q9S1A6 10835340
    6830 1d2u:A (1.15) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 11560480
    6831 1d2v:A (1.75) BS01 HEM 1.11.2.2 GO:0004601 ... P05164 10766826
    6832 1d2v:B (1.75) BS01 HEM 1.11.2.2 GO:0004601 ... P05164 10766826
    6833 1d2v:C (1.75) BS01 MAN 1.11.2.2 GO:0004601 ... P05164 10766826
    6834 1d2v:C (1.75) BS02 CA 1.11.2.2 GO:0004601 ... P05164 10766826
    6835 1d2v:C (1.75) BS03 BR 1.11.2.2 GO:0004601 ... P05164 10766826
    6836 1d2v:C (1.75) BS04 BR 1.11.2.2 GO:0004601 ... P05164 10766826
    6837 1d2v:C (1.75) BS05 BR 1.11.2.2 GO:0004601 ... P05164 10766826
    6838 1d2v:C (1.75) BS06 BR 1.11.2.2 GO:0004601 ... P05164 10766826
    6839 1d2v:C (1.75) BS07 HEM 1.11.2.2 GO:0004601 ... P05164 10766826
    6840 1d2v:D (1.75) BS01 MAN 1.11.2.2 GO:0004601 ... P05164 10766826
    6841 1d2v:D (1.75) BS02 FUC 1.11.2.2 GO:0004601 ... P05164 10766826
    6842 1d2v:D (1.75) BS03 CA 1.11.2.2 GO:0004601 ... P05164 10766826
    6843 1d2v:D (1.75) BS04 BR 1.11.2.2 GO:0004601 ... P05164 10766826
    6844 1d2v:D (1.75) BS05 BR 1.11.2.2 GO:0004601 ... P05164 10766826
    6845 1d2v:D (1.75) BS06 BR 1.11.2.2 GO:0004601 ... P05164 10766826
    6846 1d2v:D (1.75) BS07 HEM 1.11.2.2 GO:0004601 ... P05164 10766826
    6847 1d3a:A (2.94) BS01 CL 1.1.1.37 GO:0003824 ... Q07841 10653643
    6848 1d3a:B (2.94) BS01 CL 1.1.1.37 GO:0003824 ... Q07841 10653643
    6849 1d3c:A (1.78) BS01 GLC 2.4.1.19 GO:0003824 ... P43379 10574960
    6850 1d3c:A (1.78) BS02 GLC 2.4.1.19 GO:0003824 ... P43379 10574960
    6851 1d3c:A (1.78) BS03 GLC 2.4.1.19 GO:0003824 ... P43379 10574960
    6852 1d3c:A (1.78) BS04 GLC 2.4.1.19 GO:0003824 ... P43379 10574960
    6853 1d3c:A (1.78) BS05 GLC 2.4.1.19 GO:0003824 ... P43379 10574960
    6854 1d3c:A (1.78) BS06 GLC 2.4.1.19 GO:0003824 ... P43379 10574960
    6855 1d3c:A (1.78) BS07 GLC 2.4.1.19 GO:0003824 ... P43379 10574960
    6856 1d3c:A (1.78) BS08 GLC 2.4.1.19 GO:0003824 ... P43379 10574960
    6857 1d3c:A (1.78) BS09 GLC 2.4.1.19 GO:0003824 ... P43379 10574960
    6858 1d3c:A (1.78) BS10 GLC 2.4.1.19 GO:0003824 ... P43379 10574960
    6859 1d3c:A (1.78) BS11 GLC 2.4.1.19 GO:0003824 ... P43379 10574960
    6860 1d3c:A (1.78) BS12 CA 2.4.1.19 GO:0003824 ... P43379 10574960
    6861 1d3c:A (1.78) BS13 CA 2.4.1.19 GO:0003824 ... P43379 10574960
    6862 1d3c:A (1.78) BS14 CA 2.4.1.19 GO:0003824 ... P43379 10574960
    6863 1d3d:B (2.04) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10739244
    6864 1d3d:B (2.04) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 10739244
    6865 1d3d:B (2.04) BS03 BZT 3.4.21.5 GO:0004252 ... P00734 10739244 MOAD: Ka=1240000000M^-1
    PDBbind: -logKd/Ki=9.09, Kd=0.81nM
    BindingDB: Ki=2.1nM
    6866 1d3g:A (1.6) BS01 BRE 1.3.5.2 GO:0004151 ... Q02127 10673429 BindingDB: IC50=7nM
    6867 1d3g:A (1.6) BS02 FMN 1.3.5.2 GO:0004151 ... Q02127 10673429
    6868 1d3h:A (1.8) BS01 A26 1.3.5.2 GO:0004151 ... Q02127 10673429 BindingDB: IC50=300nM
    6869 1d3h:A (1.8) BS02 FMN 1.3.5.2 GO:0004151 ... Q02127 10673429
    6870 1d3k:A (1.8) BS01 CO3 ? GO:0005576 ... P02787 10739246
    6871 1d3k:A (1.8) BS02 FE ? GO:0005576 ... P02787 10739246
    6872 1d3p:B (2.1) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10739244
    6873 1d3p:B (2.1) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 10739244
    6874 1d3p:B (2.1) BS03 BT3 3.4.21.5 GO:0004252 ... P00734 10739244 MOAD: Ka=24300000M^-1
    PDBbind: -logKd/Ki=7.39, Kd=41nM
    6875 1d3q:B (2.9) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10739244
    6876 1d3q:B (2.9) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 10739244
    6877 1d3q:B (2.9) BS03 BT2 3.4.21.5 GO:0004252 ... P00734 10739244 PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    6878 1d3s:A (1.4) BS01 HEM 1.7.6.1 GO:0005576 ... Q94734 10876239
    6879 1d3t:B (3.0) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10739244
    6880 1d3t:B (3.0) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 10739244
    6881 1d3t:B (3.0) BS03 BT1 3.4.21.5 GO:0004252 ... P00734 10739244 BindingDB: Ki=374nM
    6882 1d3u:A (2.4) BS01 dna ? GO:0003677 ... P62001 10570130
    6883 1d3u:A (2.4) BS02 dna ? GO:0003677 ... P62001 10570130
    6884 1d3u:B (2.4) BS01 dna ? GO:0006352 ... P61999 10570130
    6885 1d3u:B (2.4) BS02 dna ? GO:0006352 ... P61999 10570130
    6886 1d3v:A (1.7) BS01 MN 3.5.3.1 GO:0000050 ... P07824 10542097
    6887 1d3v:A (1.7) BS02 MN 3.5.3.1 GO:0000050 ... P07824 10542097
    6888 1d3v:A (1.7) BS03 ABH 3.5.3.1 GO:0000050 ... P07824 10542097 MOAD: Kd=0.11uM
    PDBbind: -logKd/Ki=6.96, Kd=0.11uM
    6889 1d3v:B (1.7) BS01 MN 3.5.3.1 GO:0000050 ... P07824 10542097
    6890 1d3v:B (1.7) BS02 MN 3.5.3.1 GO:0000050 ... P07824 10542097
    6891 1d3v:B (1.7) BS03 ABH 3.5.3.1 GO:0000050 ... P07824 10542097 MOAD: Kd=0.11uM
    6892 1d3w:A (1.7) BS01 SF4 ? GO:0003677 ... P00214 10866206
    6893 1d3w:A (1.7) BS02 F3S ? GO:0003677 ... P00214 10866206
    6894 1d3y:A (2.0) BS01 MG 5.6.2.2 GO:0003677 ... Q57815 10545127
    6895 1d3y:B (2.0) BS01 MG 5.6.2.2 GO:0003677 ... Q57815 10545127
    6896 1d4a:A (1.7) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    6897 1d4a:A (1.7) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    6898 1d4a:B (1.7) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    6899 1d4a:B (1.7) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    6900 1d4a:C (1.7) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    6901 1d4a:D (1.7) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    6902 1d4a:D (1.7) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 10706635
    6903 1d4c:A (2.9) BS01 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6904 1d4c:A (2.9) BS02 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6905 1d4c:A (2.9) BS03 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6906 1d4c:A (2.9) BS04 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6907 1d4c:A (2.9) BS05 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    6908 1d4c:B (2.9) BS01 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6909 1d4c:B (2.9) BS02 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6910 1d4c:B (2.9) BS03 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6911 1d4c:B (2.9) BS04 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6912 1d4c:B (2.9) BS05 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    6913 1d4c:B (2.9) BS06 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6914 1d4c:B (2.9) BS07 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6915 1d4c:C (2.9) BS01 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6916 1d4c:C (2.9) BS02 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6917 1d4c:C (2.9) BS03 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6918 1d4c:C (2.9) BS04 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6919 1d4c:C (2.9) BS05 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6920 1d4c:C (2.9) BS06 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    6921 1d4c:D (2.9) BS01 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6922 1d4c:D (2.9) BS02 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6923 1d4c:D (2.9) BS03 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6924 1d4c:D (2.9) BS04 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6925 1d4c:D (2.9) BS05 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    6926 1d4d:A (2.5) BS01 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6927 1d4d:A (2.5) BS02 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6928 1d4d:A (2.5) BS03 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6929 1d4d:A (2.5) BS04 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6930 1d4d:A (2.5) BS05 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    6931 1d4e:A (2.8) BS01 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6932 1d4e:A (2.8) BS02 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6933 1d4e:A (2.8) BS03 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6934 1d4e:A (2.8) BS04 HEC 1.3.2.4 GO:0010181 ... P83223 10581551
    6935 1d4e:A (2.8) BS05 FAD 1.3.2.4 GO:0010181 ... P83223 10581551
    6936 1d4e:A (2.8) BS06 FUM 1.3.2.4 GO:0010181 ... P83223 10581551
    6937 1d4f:A (2.8) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 10913437
    6938 1d4f:A (2.8) BS02 ADN 3.13.2.1 GO:0001666 ... P10760 10913437
    6939 1d4f:B (2.8) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 10913437
    6940 1d4f:B (2.8) BS02 ADN 3.13.2.1 GO:0001666 ... P10760 10913437
    6941 1d4f:C (2.8) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 10913437
    6942 1d4f:C (2.8) BS02 ADN 3.13.2.1 GO:0001666 ... P10760 10913437
    6943 1d4f:D (2.8) BS01 NAD 3.13.2.1 GO:0001666 ... P10760 10913437
    6944 1d4f:D (2.8) BS02 NAD 3.13.2.1 GO:0001666 ... P10760 10913437
    6945 1d4f:D (2.8) BS03 ADN 3.13.2.1 GO:0001666 ... P10760 10913437
    6946 1d4h:A (1.81) BS01 BEH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    6947 1d4h:B (1.81) BS01 BEH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 12694187 MOAD: Ki=0.1nM
    PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    6948 1d4i:A (1.81) BS01 BEG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 12694187 MOAD: Ki=1.4nM
    PDBbind: -logKd/Ki=8.85, Ki=1.40nM
    6949 1d4i:B (1.81) BS01 BEG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=8.85, Ki=1.40nM
    6950 1d4j:A (1.81) BS01 MSC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=8.36, Ki=4.40nM
    6951 1d4j:B (1.81) BS01 MSC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 12694187 MOAD: Ki=4.4nM
    PDBbind: -logKd/Ki=8.36, Ki=4.40nM
    6952 1d4k:A (1.85) BS01 PI8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 11000004 MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    6953 1d4k:B (1.85) BS01 PI8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 11000004 PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    6954 1d4l:A (1.75) BS01 PI9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 11000004 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    6955 1d4l:B (1.75) BS01 PI9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03369 11000004 PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    6956 1d4m:1 (2.9) BS01 W71 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... P21404 10647183
    6957 1d4m:1 (2.9) BS02 W71 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15
    GO:0005198 ... P21404 10647183
    6958 1d4n:A (2.0) BS01 CO3 ? GO:0005576 ... P02787 10739246
    6959 1d4n:A (2.0) BS02 FE ? GO:0005576 ... P02787 10739246
    6960 1d4o:A (1.21) BS01 NAP 7.1.1.1 N/A P11024 10581554
    6961 1d4p:B (2.07) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 9232642
    6962 1d4p:B (2.07) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 9232642
    6963 1d4p:B (2.07) BS03 BPP 3.4.21.5 GO:0004252 ... P00734 9232642 MOAD: Ka=2000000M^-1
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    6964 1d4s:A (2.5) BS01 TPV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 8893827 MOAD: Ki=0.008nM
    6965 1d4s:B (2.5) BS01 TPV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 8893827
    6966 1d4t:A (1.1) BS01 peptide ? GO:0005737 ... O60880 10549287
    6967 1d4w:A (1.8) BS01 peptide ? GO:0005737 ... O60880 10549287
    6968 1d4w:B (1.8) BS01 peptide ? GO:0005737 ... O60880 10549287
    6969 1d4x:A (1.75) BS01 ATP 3.6.4.- GO:0000281 ... P0DM41 12732734
    6970 1d4x:G (1.75) BS01 CA ? GO:0051015 ... P06396 12732734
    6971 1d4y:A (1.97) BS01 TPV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 8893827 MOAD: Ki=0.008nM
    PDBbind: -logKd/Ki=11.10, Ki=0.008nM
    6972 1d4y:B (1.97) BS01 TPV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03367 8893827 PDBbind: -logKd/Ki=11.10, Ki=0.008nM
    6973 1d5a:A (2.4) BS01 MG 2.7.7.7 GO:0000166 ... Q7SIG7 10545321
    6974 1d5c:A (2.3) BS01 GDP ? GO:0003924 ... Q26000 10944329
    6975 1d5d:B (2.25) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 11015216
    6976 1d5e:B (2.25) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 11015216
    6977 1d5g:A (-1.00) BS01 peptide 3.1.3.48 N/A Q12923 12095257
    6978 1d5h:B (2.25) BS01 peptide 4.6.1.18 GO:0003676 ... P61823 11015216
    6979 1d5j:A (2.6) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10579818
    6980 1d5j:A (2.6) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10579818
    6981 1d5j:A (2.6) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10579818
    6982 1d5j:A (2.6) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10579818
    6983 1d5j:A (2.6) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10579818
    6984 1d5j:A (2.6) BS06 MM3 3.4.24.17 GO:0004222 ... P08254 10579818 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    6985 1d5j:B (2.6) BS01 ZN 3.4.24.17 GO:0004222 ... P08254 10579818
    6986 1d5j:B (2.6) BS02 ZN 3.4.24.17 GO:0004222 ... P08254 10579818
    6987 1d5j:B (2.6) BS03 CA 3.4.24.17 GO:0004222 ... P08254 10579818
    6988 1d5j:B (2.6) BS04 CA 3.4.24.17 GO:0004222 ... P08254 10579818
    6989 1d5j:B (2.6) BS05 CA 3.4.24.17 GO:0004222 ... P08254 10579818
    6990 1d5j:B (2.6) BS06 MM3 3.4.24.17 GO:0004222 ... P08254 10579818
    6991 1d5l:A (1.9) BS01 CYN 1.11.2.2 GO:0004601 ... P05164 11705390
    6992 1d5l:A (1.9) BS02 HEM 1.11.2.2 GO:0004601 ... P05164 11705390
    6993 1d5l:B (1.9) BS01 CYN 1.11.2.2 GO:0004601 ... P05164 11705390
    6994 1d5l:B (1.9) BS02 HEM 1.11.2.2 GO:0004601 ... P05164 11705390
    6995 1d5l:C (1.9) BS01 FUC 1.11.2.2 GO:0004601 ... P05164 11705390
    6996 1d5l:C (1.9) BS02 MAN 1.11.2.2 GO:0004601 ... P05164 11705390
    6997 1d5l:C (1.9) BS03 HEM 1.11.2.2 GO:0004601 ... P05164 11705390
    6998 1d5l:C (1.9) BS04 CA 1.11.2.2 GO:0004601 ... P05164 11705390
    6999 1d5l:D (1.9) BS01 MAN 1.11.2.2 GO:0004601 ... P05164 11705390
    7000 1d5l:D (1.9) BS02 FUC 1.11.2.2 GO:0004601 ... P05164 11705390

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218