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BioLiP
Download all results in tab-seperated text for 58 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7f9o:e (4.5) BS01 CL0 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    2 7f9o:e (4.5) BS02 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    3 7f9o:e (4.5) BS03 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    4 7f9o:e (4.5) BS04 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    5 7f9o:e (4.5) BS05 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    6 7f9o:e (4.5) BS06 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    7 7f9o:e (4.5) BS07 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    8 7f9o:e (4.5) BS08 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    9 7f9o:e (4.5) BS09 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    10 7f9o:e (4.5) BS10 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    11 7f9o:e (4.5) BS11 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    12 7f9o:e (4.5) BS12 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    13 7f9o:e (4.5) BS13 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    14 7f9o:e (4.5) BS14 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    15 7f9o:e (4.5) BS15 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    16 7f9o:e (4.5) BS16 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    17 7f9o:e (4.5) BS17 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    18 7f9o:e (4.5) BS18 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    19 7f9o:e (4.5) BS19 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    20 7f9o:e (4.5) BS20 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    21 7f9o:e (4.5) BS21 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    22 7f9o:e (4.5) BS22 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    23 7f9o:e (4.5) BS23 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    24 7f9o:e (4.5) BS24 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    25 7f9o:e (4.5) BS25 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    26 7f9o:e (4.5) BS26 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    27 7f9o:e (4.5) BS27 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    28 7f9o:e (4.5) BS28 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    29 7f9o:e (4.5) BS29 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    30 7f9o:e (4.5) BS30 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    31 7f9o:e (4.5) BS31 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    32 7f9o:e (4.5) BS32 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    33 7f9o:e (4.5) BS33 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    34 7f9o:e (4.5) BS34 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    35 7f9o:e (4.5) BS35 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    36 7f9o:e (4.5) BS36 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    37 7f9o:e (4.5) BS37 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    38 7f9o:e (4.5) BS38 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    39 7f9o:e (4.5) BS39 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    40 7f9o:e (4.5) BS40 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    41 7f9o:e (4.5) BS41 PQN 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    42 7f9o:e (4.5) BS42 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    43 7f9o:e (4.5) BS43 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    44 7f9o:e (4.5) BS44 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    45 7f9o:e (4.5) BS45 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    46 7f9o:e (4.5) BS46 SF4 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    47 7f9o:e (4.5) BS47 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    48 7f9o:e (4.5) BS48 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    49 7f9o:e (4.5) BS49 CLA 1.97.1.12 GO:0000287 ... S4Z1K7 34879391
    50 7f9o:f (4.5) BS01 CLA 1.97.1.12 GO:0000287 ... S4Z289 34879391
    51 7f9o:f (4.5) BS02 CLA 1.97.1.12 GO:0000287 ... S4Z289 34879391
    52 7f9o:j (4.5) BS01 CLA ? GO:0009507 ... P13192 34879391
    53 7f9o:m (4.5) BS01 CLA ? GO:0009507 ... S4Z1E9 34879391
    54 7f9o:n (4.5) BS01 CLA ? GO:0009507 ... P36886 34879391
    55 7f9o:n (4.5) BS02 CLA ? GO:0009507 ... P36886 34879391
    56 7f9o:o (4.5) BS01 CLA ? GO:0009507 ... P23993 34879391
    57 7f9o:o (4.5) BS02 CLA ? GO:0009507 ... P23993 34879391
    58 7f9o:q (4.5) BS01 CLA ? GO:0009507 ... F2DAN8 34879391
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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