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BioLiP
Download all results in tab-seperated text for 57 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6k33:bB (2.74) BS49 CLA 1.97.1.12 GO:0000287 ... P0A409 32393811
    2 6k33:cA (2.74) BS01 CL0 1.97.1.12 GO:0000287 ... P25936 32393811
    3 6k33:cA (2.74) BS02 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    4 6k33:cA (2.74) BS03 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    5 6k33:cA (2.74) BS04 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    6 6k33:cA (2.74) BS05 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    7 6k33:cA (2.74) BS06 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    8 6k33:cA (2.74) BS07 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    9 6k33:cA (2.74) BS08 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    10 6k33:cA (2.74) BS09 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    11 6k33:cA (2.74) BS10 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    12 6k33:cA (2.74) BS11 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    13 6k33:cA (2.74) BS12 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    14 6k33:cA (2.74) BS13 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    15 6k33:cA (2.74) BS14 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    16 6k33:cA (2.74) BS15 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    17 6k33:cA (2.74) BS16 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    18 6k33:cA (2.74) BS17 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    19 6k33:cA (2.74) BS18 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    20 6k33:cA (2.74) BS19 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    21 6k33:cA (2.74) BS20 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    22 6k33:cA (2.74) BS21 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    23 6k33:cA (2.74) BS22 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    24 6k33:cA (2.74) BS23 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    25 6k33:cA (2.74) BS24 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    26 6k33:cA (2.74) BS25 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    27 6k33:cA (2.74) BS26 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    28 6k33:cA (2.74) BS27 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    29 6k33:cA (2.74) BS28 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    30 6k33:cA (2.74) BS29 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    31 6k33:cA (2.74) BS30 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    32 6k33:cA (2.74) BS31 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    33 6k33:cA (2.74) BS32 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    34 6k33:cA (2.74) BS33 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    35 6k33:cA (2.74) BS34 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    36 6k33:cA (2.74) BS35 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    37 6k33:cA (2.74) BS36 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    38 6k33:cA (2.74) BS37 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    39 6k33:cA (2.74) BS38 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    40 6k33:cA (2.74) BS39 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    41 6k33:cA (2.74) BS40 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    42 6k33:cA (2.74) BS41 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    43 6k33:cA (2.74) BS42 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    44 6k33:cA (2.74) BS43 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    45 6k33:cA (2.74) BS44 PQN 1.97.1.12 GO:0000287 ... P25936 32393811
    46 6k33:cA (2.74) BS45 SF4 1.97.1.12 GO:0000287 ... P25936 32393811
    47 6k33:cA (2.74) BS46 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    48 6k33:cA (2.74) BS47 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    49 6k33:cA (2.74) BS48 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    50 6k33:cA (2.74) BS49 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    51 6k33:cA (2.74) BS50 CLA 1.97.1.12 GO:0000287 ... P25936 32393811
    52 6k33:cB (2.74) BS02 CLA 1.97.1.12 GO:0000287 ... P0A409 32393811
    53 6k33:cB (2.74) BS03 CLA 1.97.1.12 GO:0000287 ... P0A409 32393811
    54 6k33:cB (2.74) BS04 SF4 1.97.1.12 GO:0000287 ... P0A409 32393811
    55 6k33:cF (2.74) BS01 CLA N/A GO:0009522 ... N/A 32393811
    56 6k33:cL (2.74) BS04 CLA N/A GO:0009522 ... N/A 32393811
    57 6k33:cL (2.74) BS05 CLA N/A GO:0009522 ... N/A 32393811
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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