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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 10 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (resolution)     		Site
    #     		RNA
    sequence         		EC
    number     		GO
    terms     		UniProt PubMed Binding
    affinity
    1 6qkl:A
    (3.3)    		 BS01 >6qkl:N
    auuagcaguuucgggggcguaaugcucucagcugauucucaaacucugaa
cauuuuugguaagcagaacuggcgauguggguugaaccaaauauugggau
aagacgucuaacauucacuaauagauaccacaaaagguguuaguucauua
agacagcaggacgguggccauggaagucgguauccgcuaaggagugugua
acaacucaccugccaaauggacuagcccugaaaauggaugacgcuagcag
uggauggucgaugcccaaucguuaaaagaagugauaauacuuuuaacaau
ccaacuguuuaauuaaaacaaagcauugcgauaagcuuaaaagcuuuuga
cgcaaugugauuucugcccagugcucugaaugucaaagugaagagauuca
accuagcacggguaaacggcgggaguaacuaugacucucuuaagguagcc
aaaugccucgucaucuaauuagugacgcgcaugaauggaucaaugagauu
cccacugucccuaacuacuauacagcgaaaccacugcaaggggaacgggc
cuugcaaaaacagcggggaaagaagacccuguugagcuugacucuagucu
gauauuacaguuucagguggggaguuuggcuggggcggcacauuuguuaa
aagauaacgcaaguguccaaaggcaggcucagugagaacagaaaucucac
guagaguaaaagggcaaaagccugcuugauucugauuuucaguacuaauc
ggaacugggaaaccagggccuaucgauccuuuaugugcuuaaaucuuaac
ccuagaggugucagaaaaguuaccacagggauaacuggcuuguggcagcc
aagcgcucauagcgacgcugcuuuuugauccuucgaugucggcucuucuu
aucauugugaagcagaauucacaaaguguuggauuguucacccacuaaca
aggaacgugagcuggguuuagaccgucgugagacagguuaguuuuacccu
acuguugucaguuugcguaauaguagcaugauuuaguacgagaggaacug
ucaugccggaucacuggucuguagguuuauuugacaaaauagugaccugc
cgcuaccauccguuggauaauggcugaacgccucuaagucagaauccauu
cuagaaac
.....<<<<...<<<<<<.....>>>>>>.>>>>................
<<.<<<<<.....>>>>>.>>......<<<......>>>...<<<<<<..
..<<<(((...<<<<<<<....<<..........<<<.<<<<<<<<<<..
.....<<<<<.<<...<<<.........>>>...>>.........<<...
...>>...>>>>>...>>>>>>>>>>>>>..........))).>>....>
>>>>>>>>>....>>>>>>.<<<<<<<<...........>>>>>>>><<<
<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>.....
.>>>>>>>...<<..<<<..<<<<<.....<<<....<<<<<....>>>>
.>...>>>..>>>..>>>>><<<<<<.......>>>>>>........<..
.........<<<<<.......>>>>>.....>.....>>....>>.>>>>
....................................<<<<<........>
>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<
<<.<<....>>.>>>>>>..>>>>>...<<<.....>>>..<<<<<<...
........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>
.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>
>>>>.<<<....>>>.>>))).......<<<<<...<.<<.......>>.
>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<.
..<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<
..<<<<<<<<<......>>>>>>..>>>.<<<.<.....>.>>>.....>
>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>
.>>>>>..........<<..<<<..<<<<<<<.................>
>>>>>><<<<<...<<<<....<<<<<<<<<<....>>>>>..>>>>>..
.>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>..
>>>...>>
    		 ? GO:0003723 ... P34113 26479198
    2 6qkl:B
    (3.3)    		 BS01 >6qkl:N
    auuagcaguuucgggggcguaaugcucucagcugauucucaaacucugaa
cauuuuugguaagcagaacuggcgauguggguugaaccaaauauugggau
aagacgucuaacauucacuaauagauaccacaaaagguguuaguucauua
agacagcaggacgguggccauggaagucgguauccgcuaaggagugugua
acaacucaccugccaaauggacuagcccugaaaauggaugacgcuagcag
uggauggucgaugcccaaucguuaaaagaagugauaauacuuuuaacaau
ccaacuguuuaauuaaaacaaagcauugcgauaagcuuaaaagcuuuuga
cgcaaugugauuucugcccagugcucugaaugucaaagugaagagauuca
accuagcacggguaaacggcgggaguaacuaugacucucuuaagguagcc
aaaugccucgucaucuaauuagugacgcgcaugaauggaucaaugagauu
cccacugucccuaacuacuauacagcgaaaccacugcaaggggaacgggc
cuugcaaaaacagcggggaaagaagacccuguugagcuugacucuagucu
gauauuacaguuucagguggggaguuuggcuggggcggcacauuuguuaa
aagauaacgcaaguguccaaaggcaggcucagugagaacagaaaucucac
guagaguaaaagggcaaaagccugcuugauucugauuuucaguacuaauc
ggaacugggaaaccagggccuaucgauccuuuaugugcuuaaaucuuaac
ccuagaggugucagaaaaguuaccacagggauaacuggcuuguggcagcc
aagcgcucauagcgacgcugcuuuuugauccuucgaugucggcucuucuu
aucauugugaagcagaauucacaaaguguuggauuguucacccacuaaca
aggaacgugagcuggguuuagaccgucgugagacagguuaguuuuacccu
acuguugucaguuugcguaauaguagcaugauuuaguacgagaggaacug
ucaugccggaucacuggucuguagguuuauuugacaaaauagugaccugc
cgcuaccauccguuggauaauggcugaacgccucuaagucagaauccauu
cuagaaac
.....<<<<...<<<<<<.....>>>>>>.>>>>................
<<.<<<<<.....>>>>>.>>......<<<......>>>...<<<<<<..
..<<<(((...<<<<<<<....<<..........<<<.<<<<<<<<<<..
.....<<<<<.<<...<<<.........>>>...>>.........<<...
...>>...>>>>>...>>>>>>>>>>>>>..........))).>>....>
>>>>>>>>>....>>>>>>.<<<<<<<<...........>>>>>>>><<<
<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>.....
.>>>>>>>...<<..<<<..<<<<<.....<<<....<<<<<....>>>>
.>...>>>..>>>..>>>>><<<<<<.......>>>>>>........<..
.........<<<<<.......>>>>>.....>.....>>....>>.>>>>
....................................<<<<<........>
>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<
<<.<<....>>.>>>>>>..>>>>>...<<<.....>>>..<<<<<<...
........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>
.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>
>>>>.<<<....>>>.>>))).......<<<<<...<.<<.......>>.
>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<.
..<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<
..<<<<<<<<<......>>>>>>..>>>.<<<.<.....>.>>>.....>
>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>
.>>>>>..........<<..<<<..<<<<<<<.................>
>>>>>><<<<<...<<<<....<<<<<<<<<<....>>>>>..>>>>>..
.>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>..
>>>...>>
    		 ? GO:0002181 ... Q54XI5 26479198
    3 6qkl:C
    (3.3)    		 BS01 >6qkl:N
    auuagcaguuucgggggcguaaugcucucagcugauucucaaacucugaa
cauuuuugguaagcagaacuggcgauguggguugaaccaaauauugggau
aagacgucuaacauucacuaauagauaccacaaaagguguuaguucauua
agacagcaggacgguggccauggaagucgguauccgcuaaggagugugua
acaacucaccugccaaauggacuagcccugaaaauggaugacgcuagcag
uggauggucgaugcccaaucguuaaaagaagugauaauacuuuuaacaau
ccaacuguuuaauuaaaacaaagcauugcgauaagcuuaaaagcuuuuga
cgcaaugugauuucugcccagugcucugaaugucaaagugaagagauuca
accuagcacggguaaacggcgggaguaacuaugacucucuuaagguagcc
aaaugccucgucaucuaauuagugacgcgcaugaauggaucaaugagauu
cccacugucccuaacuacuauacagcgaaaccacugcaaggggaacgggc
cuugcaaaaacagcggggaaagaagacccuguugagcuugacucuagucu
gauauuacaguuucagguggggaguuuggcuggggcggcacauuuguuaa
aagauaacgcaaguguccaaaggcaggcucagugagaacagaaaucucac
guagaguaaaagggcaaaagccugcuugauucugauuuucaguacuaauc
ggaacugggaaaccagggccuaucgauccuuuaugugcuuaaaucuuaac
ccuagaggugucagaaaaguuaccacagggauaacuggcuuguggcagcc
aagcgcucauagcgacgcugcuuuuugauccuucgaugucggcucuucuu
aucauugugaagcagaauucacaaaguguuggauuguucacccacuaaca
aggaacgugagcuggguuuagaccgucgugagacagguuaguuuuacccu
acuguugucaguuugcguaauaguagcaugauuuaguacgagaggaacug
ucaugccggaucacuggucuguagguuuauuugacaaaauagugaccugc
cgcuaccauccguuggauaauggcugaacgccucuaagucagaauccauu
cuagaaac
.....<<<<...<<<<<<.....>>>>>>.>>>>................
<<.<<<<<.....>>>>>.>>......<<<......>>>...<<<<<<..
..<<<(((...<<<<<<<....<<..........<<<.<<<<<<<<<<..
.....<<<<<.<<...<<<.........>>>...>>.........<<...
...>>...>>>>>...>>>>>>>>>>>>>..........))).>>....>
>>>>>>>>>....>>>>>>.<<<<<<<<...........>>>>>>>><<<
<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>.....
.>>>>>>>...<<..<<<..<<<<<.....<<<....<<<<<....>>>>
.>...>>>..>>>..>>>>><<<<<<.......>>>>>>........<..
.........<<<<<.......>>>>>.....>.....>>....>>.>>>>
....................................<<<<<........>
>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<
<<.<<....>>.>>>>>>..>>>>>...<<<.....>>>..<<<<<<...
........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>
.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>
>>>>.<<<....>>>.>>))).......<<<<<...<.<<.......>>.
>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<.
..<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<
..<<<<<<<<<......>>>>>>..>>>.<<<.<.....>.>>>.....>
>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>
.>>>>>..........<<..<<<..<<<<<<<.................>
>>>>>><<<<<...<<<<....<<<<<<<<<<....>>>>>..>>>>>..
.>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>..
>>>...>>
    		 ? N/A P22685 26479198
    4 6qkl:D
    (3.3)    		 BS01 >6qkl:N
    auuagcaguuucgggggcguaaugcucucagcugauucucaaacucugaa
cauuuuugguaagcagaacuggcgauguggguugaaccaaauauugggau
aagacgucuaacauucacuaauagauaccacaaaagguguuaguucauua
agacagcaggacgguggccauggaagucgguauccgcuaaggagugugua
acaacucaccugccaaauggacuagcccugaaaauggaugacgcuagcag
uggauggucgaugcccaaucguuaaaagaagugauaauacuuuuaacaau
ccaacuguuuaauuaaaacaaagcauugcgauaagcuuaaaagcuuuuga
cgcaaugugauuucugcccagugcucugaaugucaaagugaagagauuca
accuagcacggguaaacggcgggaguaacuaugacucucuuaagguagcc
aaaugccucgucaucuaauuagugacgcgcaugaauggaucaaugagauu
cccacugucccuaacuacuauacagcgaaaccacugcaaggggaacgggc
cuugcaaaaacagcggggaaagaagacccuguugagcuugacucuagucu
gauauuacaguuucagguggggaguuuggcuggggcggcacauuuguuaa
aagauaacgcaaguguccaaaggcaggcucagugagaacagaaaucucac
guagaguaaaagggcaaaagccugcuugauucugauuuucaguacuaauc
ggaacugggaaaccagggccuaucgauccuuuaugugcuuaaaucuuaac
ccuagaggugucagaaaaguuaccacagggauaacuggcuuguggcagcc
aagcgcucauagcgacgcugcuuuuugauccuucgaugucggcucuucuu
aucauugugaagcagaauucacaaaguguuggauuguucacccacuaaca
aggaacgugagcuggguuuagaccgucgugagacagguuaguuuuacccu
acuguugucaguuugcguaauaguagcaugauuuaguacgagaggaacug
ucaugccggaucacuggucuguagguuuauuugacaaaauagugaccugc
cgcuaccauccguuggauaauggcugaacgccucuaagucagaauccauu
cuagaaac
.....<<<<...<<<<<<.....>>>>>>.>>>>................
<<.<<<<<.....>>>>>.>>......<<<......>>>...<<<<<<..
..<<<(((...<<<<<<<....<<..........<<<.<<<<<<<<<<..
.....<<<<<.<<...<<<.........>>>...>>.........<<...
...>>...>>>>>...>>>>>>>>>>>>>..........))).>>....>
>>>>>>>>>....>>>>>>.<<<<<<<<...........>>>>>>>><<<
<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>.....
.>>>>>>>...<<..<<<..<<<<<.....<<<....<<<<<....>>>>
.>...>>>..>>>..>>>>><<<<<<.......>>>>>>........<..
.........<<<<<.......>>>>>.....>.....>>....>>.>>>>
....................................<<<<<........>
>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<
<<.<<....>>.>>>>>>..>>>>>...<<<.....>>>..<<<<<<...
........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>
.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>
>>>>.<<<....>>>.>>))).......<<<<<...<.<<.......>>.
>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<.
..<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<
..<<<<<<<<<......>>>>>>..>>>.<<<.<.....>.>>>.....>
>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>
.>>>>>..........<<..<<<..<<<<<<<.................>
>>>>>><<<<<...<<<<....<<<<<<<<<<....>>>>>..>>>>>..
.>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>..
>>>...>>
    		 ? GO:0003735 ... Q54J50 26479198
    5 6qkl:E
    (3.3)    		 BS01 >6qkl:N
    auuagcaguuucgggggcguaaugcucucagcugauucucaaacucugaa
cauuuuugguaagcagaacuggcgauguggguugaaccaaauauugggau
aagacgucuaacauucacuaauagauaccacaaaagguguuaguucauua
agacagcaggacgguggccauggaagucgguauccgcuaaggagugugua
acaacucaccugccaaauggacuagcccugaaaauggaugacgcuagcag
uggauggucgaugcccaaucguuaaaagaagugauaauacuuuuaacaau
ccaacuguuuaauuaaaacaaagcauugcgauaagcuuaaaagcuuuuga
cgcaaugugauuucugcccagugcucugaaugucaaagugaagagauuca
accuagcacggguaaacggcgggaguaacuaugacucucuuaagguagcc
aaaugccucgucaucuaauuagugacgcgcaugaauggaucaaugagauu
cccacugucccuaacuacuauacagcgaaaccacugcaaggggaacgggc
cuugcaaaaacagcggggaaagaagacccuguugagcuugacucuagucu
gauauuacaguuucagguggggaguuuggcuggggcggcacauuuguuaa
aagauaacgcaaguguccaaaggcaggcucagugagaacagaaaucucac
guagaguaaaagggcaaaagccugcuugauucugauuuucaguacuaauc
ggaacugggaaaccagggccuaucgauccuuuaugugcuuaaaucuuaac
ccuagaggugucagaaaaguuaccacagggauaacuggcuuguggcagcc
aagcgcucauagcgacgcugcuuuuugauccuucgaugucggcucuucuu
aucauugugaagcagaauucacaaaguguuggauuguucacccacuaaca
aggaacgugagcuggguuuagaccgucgugagacagguuaguuuuacccu
acuguugucaguuugcguaauaguagcaugauuuaguacgagaggaacug
ucaugccggaucacuggucuguagguuuauuugacaaaauagugaccugc
cgcuaccauccguuggauaauggcugaacgccucuaagucagaauccauu
cuagaaac
.....<<<<...<<<<<<.....>>>>>>.>>>>................
<<.<<<<<.....>>>>>.>>......<<<......>>>...<<<<<<..
..<<<(((...<<<<<<<....<<..........<<<.<<<<<<<<<<..
.....<<<<<.<<...<<<.........>>>...>>.........<<...
...>>...>>>>>...>>>>>>>>>>>>>..........))).>>....>
>>>>>>>>>....>>>>>>.<<<<<<<<...........>>>>>>>><<<
<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>.....
.>>>>>>>...<<..<<<..<<<<<.....<<<....<<<<<....>>>>
.>...>>>..>>>..>>>>><<<<<<.......>>>>>>........<..
.........<<<<<.......>>>>>.....>.....>>....>>.>>>>
....................................<<<<<........>
>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<
<<.<<....>>.>>>>>>..>>>>>...<<<.....>>>..<<<<<<...
........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>
.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>
>>>>.<<<....>>>.>>))).......<<<<<...<.<<.......>>.
>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<.
..<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<
..<<<<<<<<<......>>>>>>..>>>.<<<.<.....>.>>>.....>
>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>
.>>>>>..........<<..<<<..<<<<<<<.................>
>>>>>><<<<<...<<<<....<<<<<<<<<<....>>>>>..>>>>>..
.>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>..
>>>...>>
    		 ? GO:0003735 ... Q54G86 26479198
    6 6qkl:F
    (3.3)    		 BS01 >6qkl:N
    auuagcaguuucgggggcguaaugcucucagcugauucucaaacucugaa
cauuuuugguaagcagaacuggcgauguggguugaaccaaauauugggau
aagacgucuaacauucacuaauagauaccacaaaagguguuaguucauua
agacagcaggacgguggccauggaagucgguauccgcuaaggagugugua
acaacucaccugccaaauggacuagcccugaaaauggaugacgcuagcag
uggauggucgaugcccaaucguuaaaagaagugauaauacuuuuaacaau
ccaacuguuuaauuaaaacaaagcauugcgauaagcuuaaaagcuuuuga
cgcaaugugauuucugcccagugcucugaaugucaaagugaagagauuca
accuagcacggguaaacggcgggaguaacuaugacucucuuaagguagcc
aaaugccucgucaucuaauuagugacgcgcaugaauggaucaaugagauu
cccacugucccuaacuacuauacagcgaaaccacugcaaggggaacgggc
cuugcaaaaacagcggggaaagaagacccuguugagcuugacucuagucu
gauauuacaguuucagguggggaguuuggcuggggcggcacauuuguuaa
aagauaacgcaaguguccaaaggcaggcucagugagaacagaaaucucac
guagaguaaaagggcaaaagccugcuugauucugauuuucaguacuaauc
ggaacugggaaaccagggccuaucgauccuuuaugugcuuaaaucuuaac
ccuagaggugucagaaaaguuaccacagggauaacuggcuuguggcagcc
aagcgcucauagcgacgcugcuuuuugauccuucgaugucggcucuucuu
aucauugugaagcagaauucacaaaguguuggauuguucacccacuaaca
aggaacgugagcuggguuuagaccgucgugagacagguuaguuuuacccu
acuguugucaguuugcguaauaguagcaugauuuaguacgagaggaacug
ucaugccggaucacuggucuguagguuuauuugacaaaauagugaccugc
cgcuaccauccguuggauaauggcugaacgccucuaagucagaauccauu
cuagaaac
.....<<<<...<<<<<<.....>>>>>>.>>>>................
<<.<<<<<.....>>>>>.>>......<<<......>>>...<<<<<<..
..<<<(((...<<<<<<<....<<..........<<<.<<<<<<<<<<..
.....<<<<<.<<...<<<.........>>>...>>.........<<...
...>>...>>>>>...>>>>>>>>>>>>>..........))).>>....>
>>>>>>>>>....>>>>>>.<<<<<<<<...........>>>>>>>><<<
<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>.....
.>>>>>>>...<<..<<<..<<<<<.....<<<....<<<<<....>>>>
.>...>>>..>>>..>>>>><<<<<<.......>>>>>>........<..
.........<<<<<.......>>>>>.....>.....>>....>>.>>>>
....................................<<<<<........>
>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<
<<.<<....>>.>>>>>>..>>>>>...<<<.....>>>..<<<<<<...
........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>
.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>
>>>>.<<<....>>>.>>))).......<<<<<...<.<<.......>>.
>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<.
..<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<
..<<<<<<<<<......>>>>>>..>>>.<<<.<.....>.>>>.....>
>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>
.>>>>>..........<<..<<<..<<<<<<<.................>
>>>>>><<<<<...<<<<....<<<<<<<<<<....>>>>>..>>>>>..
.>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>..
>>>...>>
    		 ? GO:0000027 ... Q54J69 26479198
    7 6qkl:G
    (3.3)    		 BS01 >6qkl:N
    auuagcaguuucgggggcguaaugcucucagcugauucucaaacucugaa
cauuuuugguaagcagaacuggcgauguggguugaaccaaauauugggau
aagacgucuaacauucacuaauagauaccacaaaagguguuaguucauua
agacagcaggacgguggccauggaagucgguauccgcuaaggagugugua
acaacucaccugccaaauggacuagcccugaaaauggaugacgcuagcag
uggauggucgaugcccaaucguuaaaagaagugauaauacuuuuaacaau
ccaacuguuuaauuaaaacaaagcauugcgauaagcuuaaaagcuuuuga
cgcaaugugauuucugcccagugcucugaaugucaaagugaagagauuca
accuagcacggguaaacggcgggaguaacuaugacucucuuaagguagcc
aaaugccucgucaucuaauuagugacgcgcaugaauggaucaaugagauu
cccacugucccuaacuacuauacagcgaaaccacugcaaggggaacgggc
cuugcaaaaacagcggggaaagaagacccuguugagcuugacucuagucu
gauauuacaguuucagguggggaguuuggcuggggcggcacauuuguuaa
aagauaacgcaaguguccaaaggcaggcucagugagaacagaaaucucac
guagaguaaaagggcaaaagccugcuugauucugauuuucaguacuaauc
ggaacugggaaaccagggccuaucgauccuuuaugugcuuaaaucuuaac
ccuagaggugucagaaaaguuaccacagggauaacuggcuuguggcagcc
aagcgcucauagcgacgcugcuuuuugauccuucgaugucggcucuucuu
aucauugugaagcagaauucacaaaguguuggauuguucacccacuaaca
aggaacgugagcuggguuuagaccgucgugagacagguuaguuuuacccu
acuguugucaguuugcguaauaguagcaugauuuaguacgagaggaacug
ucaugccggaucacuggucuguagguuuauuugacaaaauagugaccugc
cgcuaccauccguuggauaauggcugaacgccucuaagucagaauccauu
cuagaaac
.....<<<<...<<<<<<.....>>>>>>.>>>>................
<<.<<<<<.....>>>>>.>>......<<<......>>>...<<<<<<..
..<<<(((...<<<<<<<....<<..........<<<.<<<<<<<<<<..
.....<<<<<.<<...<<<.........>>>...>>.........<<...
...>>...>>>>>...>>>>>>>>>>>>>..........))).>>....>
>>>>>>>>>....>>>>>>.<<<<<<<<...........>>>>>>>><<<
<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>.....
.>>>>>>>...<<..<<<..<<<<<.....<<<....<<<<<....>>>>
.>...>>>..>>>..>>>>><<<<<<.......>>>>>>........<..
.........<<<<<.......>>>>>.....>.....>>....>>.>>>>
....................................<<<<<........>
>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<
<<.<<....>>.>>>>>>..>>>>>...<<<.....>>>..<<<<<<...
........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>
.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>
>>>>.<<<....>>>.>>))).......<<<<<...<.<<.......>>.
>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<.
..<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<
..<<<<<<<<<......>>>>>>..>>>.<<<.<.....>.>>>.....>
>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>
.>>>>>..........<<..<<<..<<<<<<<.................>
>>>>>><<<<<...<<<<....<<<<<<<<<<....>>>>>..>>>>>..
.>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>..
>>>...>>
    		 ? N/A Q54VN6 26479198
    8 6qkl:H
    (3.3)    		 BS01 >6qkl:N
    auuagcaguuucgggggcguaaugcucucagcugauucucaaacucugaa
cauuuuugguaagcagaacuggcgauguggguugaaccaaauauugggau
aagacgucuaacauucacuaauagauaccacaaaagguguuaguucauua
agacagcaggacgguggccauggaagucgguauccgcuaaggagugugua
acaacucaccugccaaauggacuagcccugaaaauggaugacgcuagcag
uggauggucgaugcccaaucguuaaaagaagugauaauacuuuuaacaau
ccaacuguuuaauuaaaacaaagcauugcgauaagcuuaaaagcuuuuga
cgcaaugugauuucugcccagugcucugaaugucaaagugaagagauuca
accuagcacggguaaacggcgggaguaacuaugacucucuuaagguagcc
aaaugccucgucaucuaauuagugacgcgcaugaauggaucaaugagauu
cccacugucccuaacuacuauacagcgaaaccacugcaaggggaacgggc
cuugcaaaaacagcggggaaagaagacccuguugagcuugacucuagucu
gauauuacaguuucagguggggaguuuggcuggggcggcacauuuguuaa
aagauaacgcaaguguccaaaggcaggcucagugagaacagaaaucucac
guagaguaaaagggcaaaagccugcuugauucugauuuucaguacuaauc
ggaacugggaaaccagggccuaucgauccuuuaugugcuuaaaucuuaac
ccuagaggugucagaaaaguuaccacagggauaacuggcuuguggcagcc
aagcgcucauagcgacgcugcuuuuugauccuucgaugucggcucuucuu
aucauugugaagcagaauucacaaaguguuggauuguucacccacuaaca
aggaacgugagcuggguuuagaccgucgugagacagguuaguuuuacccu
acuguugucaguuugcguaauaguagcaugauuuaguacgagaggaacug
ucaugccggaucacuggucuguagguuuauuugacaaaauagugaccugc
cgcuaccauccguuggauaauggcugaacgccucuaagucagaauccauu
cuagaaac
.....<<<<...<<<<<<.....>>>>>>.>>>>................
<<.<<<<<.....>>>>>.>>......<<<......>>>...<<<<<<..
..<<<(((...<<<<<<<....<<..........<<<.<<<<<<<<<<..
.....<<<<<.<<...<<<.........>>>...>>.........<<...
...>>...>>>>>...>>>>>>>>>>>>>..........))).>>....>
>>>>>>>>>....>>>>>>.<<<<<<<<...........>>>>>>>><<<
<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>.....
.>>>>>>>...<<..<<<..<<<<<.....<<<....<<<<<....>>>>
.>...>>>..>>>..>>>>><<<<<<.......>>>>>>........<..
.........<<<<<.......>>>>>.....>.....>>....>>.>>>>
....................................<<<<<........>
>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<
<<.<<....>>.>>>>>>..>>>>>...<<<.....>>>..<<<<<<...
........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>
.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>
>>>>.<<<....>>>.>>))).......<<<<<...<.<<.......>>.
>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<.
..<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<
..<<<<<<<<<......>>>>>>..>>>.<<<.<.....>.>>>.....>
>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>
.>>>>>..........<<..<<<..<<<<<<<.................>
>>>>>><<<<<...<<<<....<<<<<<<<<<....>>>>>..>>>>>..
.>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>..
>>>...>>
    		 ? GO:0003735 ... P14794 26479198
    9 6qkl:I
    (3.3)    		 BS01 >6qkl:N
    auuagcaguuucgggggcguaaugcucucagcugauucucaaacucugaa
cauuuuugguaagcagaacuggcgauguggguugaaccaaauauugggau
aagacgucuaacauucacuaauagauaccacaaaagguguuaguucauua
agacagcaggacgguggccauggaagucgguauccgcuaaggagugugua
acaacucaccugccaaauggacuagcccugaaaauggaugacgcuagcag
uggauggucgaugcccaaucguuaaaagaagugauaauacuuuuaacaau
ccaacuguuuaauuaaaacaaagcauugcgauaagcuuaaaagcuuuuga
cgcaaugugauuucugcccagugcucugaaugucaaagugaagagauuca
accuagcacggguaaacggcgggaguaacuaugacucucuuaagguagcc
aaaugccucgucaucuaauuagugacgcgcaugaauggaucaaugagauu
cccacugucccuaacuacuauacagcgaaaccacugcaaggggaacgggc
cuugcaaaaacagcggggaaagaagacccuguugagcuugacucuagucu
gauauuacaguuucagguggggaguuuggcuggggcggcacauuuguuaa
aagauaacgcaaguguccaaaggcaggcucagugagaacagaaaucucac
guagaguaaaagggcaaaagccugcuugauucugauuuucaguacuaauc
ggaacugggaaaccagggccuaucgauccuuuaugugcuuaaaucuuaac
ccuagaggugucagaaaaguuaccacagggauaacuggcuuguggcagcc
aagcgcucauagcgacgcugcuuuuugauccuucgaugucggcucuucuu
aucauugugaagcagaauucacaaaguguuggauuguucacccacuaaca
aggaacgugagcuggguuuagaccgucgugagacagguuaguuuuacccu
acuguugucaguuugcguaauaguagcaugauuuaguacgagaggaacug
ucaugccggaucacuggucuguagguuuauuugacaaaauagugaccugc
cgcuaccauccguuggauaauggcugaacgccucuaagucagaauccauu
cuagaaac
.....<<<<...<<<<<<.....>>>>>>.>>>>................
<<.<<<<<.....>>>>>.>>......<<<......>>>...<<<<<<..
..<<<(((...<<<<<<<....<<..........<<<.<<<<<<<<<<..
.....<<<<<.<<...<<<.........>>>...>>.........<<...
...>>...>>>>>...>>>>>>>>>>>>>..........))).>>....>
>>>>>>>>>....>>>>>>.<<<<<<<<...........>>>>>>>><<<
<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>.....
.>>>>>>>...<<..<<<..<<<<<.....<<<....<<<<<....>>>>
.>...>>>..>>>..>>>>><<<<<<.......>>>>>>........<..
.........<<<<<.......>>>>>.....>.....>>....>>.>>>>
....................................<<<<<........>
>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<
<<.<<....>>.>>>>>>..>>>>>...<<<.....>>>..<<<<<<...
........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>
.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>
>>>>.<<<....>>>.>>))).......<<<<<...<.<<.......>>.
>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<.
..<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<
..<<<<<<<<<......>>>>>>..>>>.<<<.<.....>.>>>.....>
>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>
.>>>>>..........<<..<<<..<<<<<<<.................>
>>>>>><<<<<...<<<<....<<<<<<<<<<....>>>>>..>>>>>..
.>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>..
>>>...>>
    		 ? GO:0000054 ... Q551M2 26479198
    10 6qkl:J
    (3.3)    		 BS01 >6qkl:N
    auuagcaguuucgggggcguaaugcucucagcugauucucaaacucugaa
cauuuuugguaagcagaacuggcgauguggguugaaccaaauauugggau
aagacgucuaacauucacuaauagauaccacaaaagguguuaguucauua
agacagcaggacgguggccauggaagucgguauccgcuaaggagugugua
acaacucaccugccaaauggacuagcccugaaaauggaugacgcuagcag
uggauggucgaugcccaaucguuaaaagaagugauaauacuuuuaacaau
ccaacuguuuaauuaaaacaaagcauugcgauaagcuuaaaagcuuuuga
cgcaaugugauuucugcccagugcucugaaugucaaagugaagagauuca
accuagcacggguaaacggcgggaguaacuaugacucucuuaagguagcc
aaaugccucgucaucuaauuagugacgcgcaugaauggaucaaugagauu
cccacugucccuaacuacuauacagcgaaaccacugcaaggggaacgggc
cuugcaaaaacagcggggaaagaagacccuguugagcuugacucuagucu
gauauuacaguuucagguggggaguuuggcuggggcggcacauuuguuaa
aagauaacgcaaguguccaaaggcaggcucagugagaacagaaaucucac
guagaguaaaagggcaaaagccugcuugauucugauuuucaguacuaauc
ggaacugggaaaccagggccuaucgauccuuuaugugcuuaaaucuuaac
ccuagaggugucagaaaaguuaccacagggauaacuggcuuguggcagcc
aagcgcucauagcgacgcugcuuuuugauccuucgaugucggcucuucuu
aucauugugaagcagaauucacaaaguguuggauuguucacccacuaaca
aggaacgugagcuggguuuagaccgucgugagacagguuaguuuuacccu
acuguugucaguuugcguaauaguagcaugauuuaguacgagaggaacug
ucaugccggaucacuggucuguagguuuauuugacaaaauagugaccugc
cgcuaccauccguuggauaauggcugaacgccucuaagucagaauccauu
cuagaaac
.....<<<<...<<<<<<.....>>>>>>.>>>>................
<<.<<<<<.....>>>>>.>>......<<<......>>>...<<<<<<..
..<<<(((...<<<<<<<....<<..........<<<.<<<<<<<<<<..
.....<<<<<.<<...<<<.........>>>...>>.........<<...
...>>...>>>>>...>>>>>>>>>>>>>..........))).>>....>
>>>>>>>>>....>>>>>>.<<<<<<<<...........>>>>>>>><<<
<<<..<<<.........>>>..<<<<<<<....<<<<....>>>>.....
.>>>>>>>...<<..<<<..<<<<<.....<<<....<<<<<....>>>>
.>...>>>..>>>..>>>>><<<<<<.......>>>>>>........<..
.........<<<<<.......>>>>>.....>.....>>....>>.>>>>
....................................<<<<<........>
>>>>....<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<
<<.<<....>>.>>>>>>..>>>>>...<<<.....>>>..<<<<<<...
........>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>
.....<<...(((>>....>>>>>>>...<<<<<<<<.........>>>>
>>>>.<<<....>>>.>>))).......<<<<<...<.<<.......>>.
>.>>>>>..........>>>>..>>>>>>.......<<.<.<.<<<<<<.
..<<.......>>...>>>>>>...>>.>.>.......<<<<<.<<<<<<
..<<<<<<<<<......>>>>>>..>>>.<<<.<.....>.>>>.....>
>>>>..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>
.>>>>>..........<<..<<<..<<<<<<<.................>
>>>>>><<<<<...<<<<....<<<<<<<<<<....>>>>>..>>>>>..
.>>>>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>..
>>>...>>
    		 ? GO:0000922 ... Q9Y3A5 26479198
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218