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BioLiP
Download all results in tab-seperated text for 23 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (resolution)
    Site
    #
    RNA
    sequence
    EC
    number
    GO
    terms
    UniProt PubMed Binding
    affinity
    1 6zj3:L1
    (3.15)
    BS03 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    2 6zj3:L2
    (3.15)
    BS01 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    3 6zj3:LR
    (3.15)
    BS05 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    4 6zj3:LV
    (3.15)
    BS04 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    ? GO:0000470 ... Q4VH13 33091122
    5 6zj3:LW
    (3.15)
    BS02 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    6 6zj3:LZ
    (3.15)
    BS02 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003723 ... N/A 33091122
    7 6zj3:La
    (3.15)
    BS04 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    8 6zj3:Lb
    (3.15)
    BS05 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    9 6zj3:Lc
    (3.15)
    BS02 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    ? GO:0000027 ... Q39724 33091122
    10 6zj3:Le
    (3.15)
    BS03 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    11 6zj3:Lf
    (3.15)
    BS03 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003723 ... N/A 33091122
    12 6zj3:Lg
    (3.15)
    BS02 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    13 6zj3:Lh
    (3.15)
    BS02 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    14 6zj3:Li
    (3.15)
    BS04 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    15 6zj3:Lk
    (3.15)
    BS03 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    16 6zj3:Lo
    (3.15)
    BS01 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A N/A N/A 33091122
    17 6zj3:Lq
    (3.15)
    BS02 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    18 6zj3:Lr
    (3.15)
    BS03 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0000463 ... N/A 33091122
    19 6zj3:Lt
    (3.15)
    BS01 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    20 6zj3:Lu
    (3.15)
    BS03 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    21 6zj3:Lv
    (3.15)
    BS04 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    22 6zj3:Lw
    (3.15)
    BS02 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122
    23 6zj3:Ly
    (3.15)
    BS05 >6zj3:LF
    uugaacaauggauccuacguggaccaugacugguaagcagugcuggugau
    gcggggugcuccgagagcagacuuacagaucccgagugcuggcucauacu
    cagaucccacaaaggauguugcuuacuagugcgcagcuccgaaaauggau
    ggugcccaagucagugugucucccuuacagucugccaucgauguggcagc
    caaggcagagcaucguuguguagaaagggcauggacaacagcugaucgug
    uugggauugaucccggcuugaggcguugcccagagcagaucuugguugua
    guagcgaguacuccaccuggagaggaguggcaacacaaccccgcugugug
    cgguugaggacuggaguggagcagguuuccacaccaaacagccguugaau
    gugggucaaccgaccgugagccaagugguaaguucaccgaacaaccaaag
    cugccu
    ......................<<<<..<<<<.....>>>>..>>>>...
    .<<<......>>>...<<<<<<<...<<..((.....<<<<<<.......
    ..<..........<<<.<<<<<.<<<..>>>.>>>>>>>>..........
    ))..>....>>>>>>........>>...>>>>>>><<.<<<<<<......
    .........>>>>>>.>>.............<<<.<<<<.<<.......<
    <<<<<<....>>>>>>>.....>>>>>>.>>>..................
    ..........<<<.<<<.........<<<<..........>>>>......
    .>>>.>>>....................<<<<<.....<<.....>>..>
    >>>>....................<<<.......>>>.............
    ......
    N/A GO:0003735 ... N/A 33091122

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218