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BioLiP
Download all results in tab-seperated text for 15 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7oy8:A (2.5) BS02 U10 ? GO:0016020 ... Q2RQ24 34402504
    2 7oy8:L (2.5) BS01 BPH ? GO:0009772 ... Q2RQ25 34402504
    3 7oy8:L (2.5) BS02 RQ0 ? GO:0009772 ... Q2RQ25 34402504
    4 7oy8:L (2.5) BS03 U10 ? GO:0009772 ... Q2RQ25 34402504
    5 7oy8:L (2.5) BS04 07D ? GO:0009772 ... Q2RQ25 34402504
    6 7oy8:L (2.5) BS05 07D ? GO:0009772 ... Q2RQ25 34402504
    7 7oy8:L (2.5) BS06 U10 ? GO:0009772 ... Q2RQ25 34402504
    8 7oy8:L (2.5) BS07 FE ? GO:0009772 ... Q2RQ25 34402504
    9 7oy8:L (2.5) BS08 BPH ? GO:0009772 ... Q2RQ25 34402504
    10 7oy8:L (2.5) BS09 U10 ? GO:0009772 ... Q2RQ25 34402504
    11 7oy8:L (2.5) BS10 07D ? GO:0009772 ... Q2RQ25 34402504
    12 7oy8:M (2.5) BS02 BPH ? GO:0009772 ... Q2RQ26 34402504
    13 7oy8:M (2.5) BS03 RQ0 ? GO:0009772 ... Q2RQ26 34402504
    14 7oy8:M (2.5) BS04 07D ? GO:0009772 ... Q2RQ26 34402504
    15 7oy8:R (2.5) BS01 U10 ? GO:0005886 ... Q2RQ24 34402504
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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