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BioLiP
Download all results in tab-seperated text for 20 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8jze:G (2.99) BS01 DD6 N/A GO:0009765 ... N/A 38319970
    2 8jze:G (2.99) BS02 UIX N/A GO:0009765 ... N/A 38319970
    3 8jze:G (2.99) BS03 DD6 N/A GO:0009765 ... N/A 38319970
    4 8jze:G (2.99) BS04 DD6 N/A GO:0009765 ... N/A 38319970
    5 8jze:G (2.99) BS05 PID N/A GO:0009765 ... N/A 38319970
    6 8jze:G (2.99) BS06 PID N/A GO:0009765 ... N/A 38319970
    7 8jze:G (2.99) BS07 CLA N/A GO:0009765 ... N/A 38319970
    8 8jze:G (2.99) BS08 CLA N/A GO:0009765 ... N/A 38319970
    9 8jze:G (2.99) BS09 CLA N/A GO:0009765 ... N/A 38319970
    10 8jze:G (2.99) BS10 CLA N/A GO:0009765 ... N/A 38319970
    11 8jze:G (2.99) BS11 CLA N/A GO:0009765 ... N/A 38319970
    12 8jze:G (2.99) BS12 CLA N/A GO:0009765 ... N/A 38319970
    13 8jze:G (2.99) BS13 KC1 N/A GO:0009765 ... N/A 38319970
    14 8jze:G (2.99) BS14 CLA N/A GO:0009765 ... N/A 38319970
    15 8jze:G (2.99) BS15 CLA N/A GO:0009765 ... N/A 38319970
    16 8jze:G (2.99) BS16 CLA N/A GO:0009765 ... N/A 38319970
    17 8jze:G (2.99) BS17 CLA N/A GO:0009765 ... N/A 38319970
    18 8jze:b (2.99) BS01 CLA 1.97.1.12 GO:0009507 ... A0A0A0N2P0 38319970
    19 8jze:h (2.99) BS01 CLA ? N/A A0A812Q823 38319970
    20 8jze:h (2.99) BS02 CLA ? N/A A0A812Q823 38319970
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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