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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 30 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (resolution)
    Site
    #
    RNA
    sequence
    EC
    number
    GO
    terms
    UniProt PubMed Binding
    affinity
    1 6hiy:CE
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0003735 ... Q38AX6 30213880
    2 6hiy:CF
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q38BW5 30213880
    3 6hiy:CH
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0000314 ... Q388R7 30213880
    4 6hiy:CK
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0003735 ... Q389T7 30213880
    5 6hiy:CL
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    N/A N/A N/A 30213880
    6 6hiy:CO
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q4GZ99 30213880
    7 6hiy:CP
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005737 ... Q384N9 30213880
    8 6hiy:CQ
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0000314 ... Q38DP8 30213880
    9 6hiy:CR
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0003723 ... Q38AS2 30213880
    10 6hiy:CU
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q580M9 30213880
    11 6hiy:CZ
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q57WU2 30213880
    12 6hiy:Ca
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q38DR3 30213880
    13 6hiy:Cb
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005737 ... Q57VB2 30213880
    14 6hiy:Cd
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q38DK6 30213880
    15 6hiy:Cj
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q57UK0 30213880
    16 6hiy:Cm
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005737 ... Q38C96 30213880
    17 6hiy:Cn
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q57VQ9 30213880
    18 6hiy:Cp
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q389L3 30213880
    19 6hiy:Cv
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    3.1.2.4 GO:0003860 ... Q383R4 30213880
    20 6hiy:DA
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q57UJ2 30213880
    21 6hiy:DD
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0000963 ... Q385L8 30213880
    22 6hiy:DP
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005737 ... Q38F25 30213880
    23 6hiy:DQ
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005737 ... Q382E8 30213880
    24 6hiy:DR
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q57UA2 30213880
    25 6hiy:DS
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q388L7 30213880
    26 6hiy:DU
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q582T9 30213880
    27 6hiy:DZ
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    ? GO:0005739 ... Q587C4 30213880
    28 6hiy:Da
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    N/A N/A N/A 30213880
    29 6hiy:US
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    N/A N/A N/A 30213880
    30 6hiy:UT
    (3.27)
    BS01 >6hiy:CA
    uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
    ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
    aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
    uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
    aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
    ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaaguguug
    auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
    agguauaugcaaauauaaaauuauaguaauuauaaauuauauuaaaaagg
    uauuguugcccaccaauuuuuauaauaaaaauaacgugcaguaauuaaua
    uauuuauaaaaauauauuuuuuuuuuuu
    ....................<<<.......<<<<..............<.
    ..>..........................................<<...
    .<<...<<<.......>>>..>>.......>>........<<....>>..
    ..................................................
    .................<<<.(...<<<<<.....<<..).>>.......
    >>>>>>>>.......>>>>............<..................
    .<.......>.....................>............<<<...
    .>>>................<......>..>>>..<<.............
    .>>....<<.<<<..<<<<<<.....>>>>>>...>>>..>>....<<<<
    <<<<<....>>>>>>>>>..........
    N/A N/A N/A 30213880

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218