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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 9 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (resolution)     		Site
    #     		RNA
    sequence         		EC
    number     		GO
    terms     		UniProt PubMed Binding
    affinity
    1 6n8n:F
    (3.8)    		 BS02 >6n8n:C (identical to 8aaf:i, 8agt:i, 8agu:i, 8agv:i, 8agw:i, 8agx:i, 8agz:i, 5apn:8, 5apo:8, 7azy:G, 7b7d:LC, 8bip:C3, 8bjq:C3, 8bn3:4, 8bqd:BS, 8bqx:BS, 7bt6:2, 7btb:2, 6c0f:2, 6cb1:2, 8ccs:CC, 8cdl:CC, 8cdr:CC, 8ceh:CC, 8cf5:CC, 8cg8:CC, 8cgn:CC, 8civ:CC, 8cku:CC, 8cmj:CC, 5dat:4, 5dat:8, 5dc3:4, 5dc3:8, 5dge:4, 5dge:8, 5dgf:4, 5dgf:8, 5dgv:4, 5dgv:8, 6elz:2, 6em1:2, 6em4:2, 6em5:2, 8eub:A4, 8evp:A4, 8evq:A4, 8evr:A4, 8evs:A4, 8evt:A4, 8ewb:A4, 8ewc:A4, 5fci:4, 5fci:8, 5fcj:4, 5fcj:8, 5gak:4, 6gq1:4, 6gqb:4, 6gqv:4, 5h4p:4, 6hd7:4, 6hhq:4, 6hhq:AT, 5i4l:4, 5i4l:8, 3j6x:8S, 3j6y:8S, 3j77:8S, 3j78:8S, 3jct:2, 5jcs:y, 5juo:C, 5jup:C, 5jus:C, 5jut:C, 5juu:C, 8k82:C3, 5lyb:4, 5lyb:8, 5m1j:44, 6m62:2, 5mc6:BS, 5mei:4, 5mei:AT, 7mpi:A4, 7mpj:A4, 6n8j:3, 6n8m:C, 6n8o:C, 7n8b:A4, 7nac:2, 5ndg:4, 5ndv:8, 5ndw:4, 5ndw:8, 7nrc:LC, 7nrd:LC, 5obm:8, 7of1:2, 7ohq:2, 7ohr:2, 6oig:8, 5on6:4, 5on6:AT, 7osa:58S, 7osm:58S, 8p8m:LD, 8p8u:LD, 8pfr:LD, 6q8y:BS, 7r7a:2, 6r84:4, 6r86:4, 6r87:4, 7rr5:C3, 6s47:AC, 6snt:3, 6t4q:C3, 5t62:C, 5t6r:C, 6t7i:C3, 6t7t:C3, 6t83:3b, 5tbw:4, 5tbw:AT, 6tb3:BS, 5tga:4, 5tga:8, 5tgm:4, 5tgm:8, 6tnu:BS, 7too:A58S, 7top:A58S, 7u0h:2, 4u3m:4, 4u3m:8, 4u3n:4, 4u3n:8, 4u3u:4, 4u3u:8, 4u4n:4, 4u4n:8, 4u4o:4, 4u4o:8, 4u4q:4, 4u4q:8, 4u4r:4, 4u4r:8, 4u4u:4, 4u4u:8, 4u4y:4, 4u4y:8, 4u4z:4, 4u4z:8, 4u50:4, 4u50:8, 4u51:4, 4u51:8, 4u52:4, 4u52:8, 4u53:4, 4u53:8, 4u55:4, 4u55:8, 4u56:4, 4u56:8, 4u6f:4, 4u6f:8, 7ug6:2, 7uoo:2, 7uqb:2, 7uqz:2, 7v08:2, 4v7r:B3, 4v7r:D3, 4v88:A4, 4v88:A8, 4v8t:8, 4v8y:B8, 4v8z:B8, 4v91:4, 6xiq:4, 6xir:4, 8y0u:C3, 6ylx:2, 6yly:3, 7zpq:3, 7zrs:3, 7zs5:4, 7zuw:3, 7zux:3, 7zw0:LD)
    aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagc
gaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgccccuugguauuccagggggcaugccuguuugag
cgucauuu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>..............>>>..)...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
........
    		 ? GO:0002181 ... P10664 30814529
    2 6n8n:J
    (3.8)    		 BS02 >6n8n:C (identical to 8aaf:i, 8agt:i, 8agu:i, 8agv:i, 8agw:i, 8agx:i, 8agz:i, 5apn:8, 5apo:8, 7azy:G, 7b7d:LC, 8bip:C3, 8bjq:C3, 8bn3:4, 8bqd:BS, 8bqx:BS, 7bt6:2, 7btb:2, 6c0f:2, 6cb1:2, 8ccs:CC, 8cdl:CC, 8cdr:CC, 8ceh:CC, 8cf5:CC, 8cg8:CC, 8cgn:CC, 8civ:CC, 8cku:CC, 8cmj:CC, 5dat:4, 5dat:8, 5dc3:4, 5dc3:8, 5dge:4, 5dge:8, 5dgf:4, 5dgf:8, 5dgv:4, 5dgv:8, 6elz:2, 6em1:2, 6em4:2, 6em5:2, 8eub:A4, 8evp:A4, 8evq:A4, 8evr:A4, 8evs:A4, 8evt:A4, 8ewb:A4, 8ewc:A4, 5fci:4, 5fci:8, 5fcj:4, 5fcj:8, 5gak:4, 6gq1:4, 6gqb:4, 6gqv:4, 5h4p:4, 6hd7:4, 6hhq:4, 6hhq:AT, 5i4l:4, 5i4l:8, 3j6x:8S, 3j6y:8S, 3j77:8S, 3j78:8S, 3jct:2, 5jcs:y, 5juo:C, 5jup:C, 5jus:C, 5jut:C, 5juu:C, 8k82:C3, 5lyb:4, 5lyb:8, 5m1j:44, 6m62:2, 5mc6:BS, 5mei:4, 5mei:AT, 7mpi:A4, 7mpj:A4, 6n8j:3, 6n8m:C, 6n8o:C, 7n8b:A4, 7nac:2, 5ndg:4, 5ndv:8, 5ndw:4, 5ndw:8, 7nrc:LC, 7nrd:LC, 5obm:8, 7of1:2, 7ohq:2, 7ohr:2, 6oig:8, 5on6:4, 5on6:AT, 7osa:58S, 7osm:58S, 8p8m:LD, 8p8u:LD, 8pfr:LD, 6q8y:BS, 7r7a:2, 6r84:4, 6r86:4, 6r87:4, 7rr5:C3, 6s47:AC, 6snt:3, 6t4q:C3, 5t62:C, 5t6r:C, 6t7i:C3, 6t7t:C3, 6t83:3b, 5tbw:4, 5tbw:AT, 6tb3:BS, 5tga:4, 5tga:8, 5tgm:4, 5tgm:8, 6tnu:BS, 7too:A58S, 7top:A58S, 7u0h:2, 4u3m:4, 4u3m:8, 4u3n:4, 4u3n:8, 4u3u:4, 4u3u:8, 4u4n:4, 4u4n:8, 4u4o:4, 4u4o:8, 4u4q:4, 4u4q:8, 4u4r:4, 4u4r:8, 4u4u:4, 4u4u:8, 4u4y:4, 4u4y:8, 4u4z:4, 4u4z:8, 4u50:4, 4u50:8, 4u51:4, 4u51:8, 4u52:4, 4u52:8, 4u53:4, 4u53:8, 4u55:4, 4u55:8, 4u56:4, 4u56:8, 4u6f:4, 4u6f:8, 7ug6:2, 7uoo:2, 7uqb:2, 7uqz:2, 7v08:2, 4v7r:B3, 4v7r:D3, 4v88:A4, 4v88:A8, 4v8t:8, 4v8y:B8, 4v8z:B8, 4v91:4, 6xiq:4, 6xir:4, 8y0u:C3, 6ylx:2, 6yly:3, 7zpq:3, 7zrs:3, 7zs5:4, 7zuw:3, 7zux:3, 7zw0:LD)
    aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagc
gaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgccccuugguauuccagggggcaugccuguuugag
cgucauuu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>..............>>>..)...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
........
    		 ? GO:0000470 ... P17076 30814529
    3 6n8n:a
    (3.8)    		 BS02 >6n8n:C (identical to 8aaf:i, 8agt:i, 8agu:i, 8agv:i, 8agw:i, 8agx:i, 8agz:i, 5apn:8, 5apo:8, 7azy:G, 7b7d:LC, 8bip:C3, 8bjq:C3, 8bn3:4, 8bqd:BS, 8bqx:BS, 7bt6:2, 7btb:2, 6c0f:2, 6cb1:2, 8ccs:CC, 8cdl:CC, 8cdr:CC, 8ceh:CC, 8cf5:CC, 8cg8:CC, 8cgn:CC, 8civ:CC, 8cku:CC, 8cmj:CC, 5dat:4, 5dat:8, 5dc3:4, 5dc3:8, 5dge:4, 5dge:8, 5dgf:4, 5dgf:8, 5dgv:4, 5dgv:8, 6elz:2, 6em1:2, 6em4:2, 6em5:2, 8eub:A4, 8evp:A4, 8evq:A4, 8evr:A4, 8evs:A4, 8evt:A4, 8ewb:A4, 8ewc:A4, 5fci:4, 5fci:8, 5fcj:4, 5fcj:8, 5gak:4, 6gq1:4, 6gqb:4, 6gqv:4, 5h4p:4, 6hd7:4, 6hhq:4, 6hhq:AT, 5i4l:4, 5i4l:8, 3j6x:8S, 3j6y:8S, 3j77:8S, 3j78:8S, 3jct:2, 5jcs:y, 5juo:C, 5jup:C, 5jus:C, 5jut:C, 5juu:C, 8k82:C3, 5lyb:4, 5lyb:8, 5m1j:44, 6m62:2, 5mc6:BS, 5mei:4, 5mei:AT, 7mpi:A4, 7mpj:A4, 6n8j:3, 6n8m:C, 6n8o:C, 7n8b:A4, 7nac:2, 5ndg:4, 5ndv:8, 5ndw:4, 5ndw:8, 7nrc:LC, 7nrd:LC, 5obm:8, 7of1:2, 7ohq:2, 7ohr:2, 6oig:8, 5on6:4, 5on6:AT, 7osa:58S, 7osm:58S, 8p8m:LD, 8p8u:LD, 8pfr:LD, 6q8y:BS, 7r7a:2, 6r84:4, 6r86:4, 6r87:4, 7rr5:C3, 6s47:AC, 6snt:3, 6t4q:C3, 5t62:C, 5t6r:C, 6t7i:C3, 6t7t:C3, 6t83:3b, 5tbw:4, 5tbw:AT, 6tb3:BS, 5tga:4, 5tga:8, 5tgm:4, 5tgm:8, 6tnu:BS, 7too:A58S, 7top:A58S, 7u0h:2, 4u3m:4, 4u3m:8, 4u3n:4, 4u3n:8, 4u3u:4, 4u3u:8, 4u4n:4, 4u4n:8, 4u4o:4, 4u4o:8, 4u4q:4, 4u4q:8, 4u4r:4, 4u4r:8, 4u4u:4, 4u4u:8, 4u4y:4, 4u4y:8, 4u4z:4, 4u4z:8, 4u50:4, 4u50:8, 4u51:4, 4u51:8, 4u52:4, 4u52:8, 4u53:4, 4u53:8, 4u55:4, 4u55:8, 4u56:4, 4u56:8, 4u6f:4, 4u6f:8, 7ug6:2, 7uoo:2, 7uqb:2, 7uqz:2, 7v08:2, 4v7r:B3, 4v7r:D3, 4v88:A4, 4v88:A8, 4v8t:8, 4v8y:B8, 4v8z:B8, 4v91:4, 6xiq:4, 6xir:4, 8y0u:C3, 6ylx:2, 6yly:3, 7zpq:3, 7zrs:3, 7zs5:4, 7zuw:3, 7zux:3, 7zw0:LD)
    aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagc
gaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgccccuugguauuccagggggcaugccuguuugag
cgucauuu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>..............>>>..)...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
........
    		 ? GO:0002181 ... P05748 30814529
    4 6n8n:c
    (3.8)    		 BS02 >6n8n:C (identical to 8aaf:i, 8agt:i, 8agu:i, 8agv:i, 8agw:i, 8agx:i, 8agz:i, 5apn:8, 5apo:8, 7azy:G, 7b7d:LC, 8bip:C3, 8bjq:C3, 8bn3:4, 8bqd:BS, 8bqx:BS, 7bt6:2, 7btb:2, 6c0f:2, 6cb1:2, 8ccs:CC, 8cdl:CC, 8cdr:CC, 8ceh:CC, 8cf5:CC, 8cg8:CC, 8cgn:CC, 8civ:CC, 8cku:CC, 8cmj:CC, 5dat:4, 5dat:8, 5dc3:4, 5dc3:8, 5dge:4, 5dge:8, 5dgf:4, 5dgf:8, 5dgv:4, 5dgv:8, 6elz:2, 6em1:2, 6em4:2, 6em5:2, 8eub:A4, 8evp:A4, 8evq:A4, 8evr:A4, 8evs:A4, 8evt:A4, 8ewb:A4, 8ewc:A4, 5fci:4, 5fci:8, 5fcj:4, 5fcj:8, 5gak:4, 6gq1:4, 6gqb:4, 6gqv:4, 5h4p:4, 6hd7:4, 6hhq:4, 6hhq:AT, 5i4l:4, 5i4l:8, 3j6x:8S, 3j6y:8S, 3j77:8S, 3j78:8S, 3jct:2, 5jcs:y, 5juo:C, 5jup:C, 5jus:C, 5jut:C, 5juu:C, 8k82:C3, 5lyb:4, 5lyb:8, 5m1j:44, 6m62:2, 5mc6:BS, 5mei:4, 5mei:AT, 7mpi:A4, 7mpj:A4, 6n8j:3, 6n8m:C, 6n8o:C, 7n8b:A4, 7nac:2, 5ndg:4, 5ndv:8, 5ndw:4, 5ndw:8, 7nrc:LC, 7nrd:LC, 5obm:8, 7of1:2, 7ohq:2, 7ohr:2, 6oig:8, 5on6:4, 5on6:AT, 7osa:58S, 7osm:58S, 8p8m:LD, 8p8u:LD, 8pfr:LD, 6q8y:BS, 7r7a:2, 6r84:4, 6r86:4, 6r87:4, 7rr5:C3, 6s47:AC, 6snt:3, 6t4q:C3, 5t62:C, 5t6r:C, 6t7i:C3, 6t7t:C3, 6t83:3b, 5tbw:4, 5tbw:AT, 6tb3:BS, 5tga:4, 5tga:8, 5tgm:4, 5tgm:8, 6tnu:BS, 7too:A58S, 7top:A58S, 7u0h:2, 4u3m:4, 4u3m:8, 4u3n:4, 4u3n:8, 4u3u:4, 4u3u:8, 4u4n:4, 4u4n:8, 4u4o:4, 4u4o:8, 4u4q:4, 4u4q:8, 4u4r:4, 4u4r:8, 4u4u:4, 4u4u:8, 4u4y:4, 4u4y:8, 4u4z:4, 4u4z:8, 4u50:4, 4u50:8, 4u51:4, 4u51:8, 4u52:4, 4u52:8, 4u53:4, 4u53:8, 4u55:4, 4u55:8, 4u56:4, 4u56:8, 4u6f:4, 4u6f:8, 7ug6:2, 7uoo:2, 7uqb:2, 7uqz:2, 7v08:2, 4v7r:B3, 4v7r:D3, 4v88:A4, 4v88:A8, 4v8t:8, 4v8y:B8, 4v8z:B8, 4v91:4, 6xiq:4, 6xir:4, 8y0u:C3, 6ylx:2, 6yly:3, 7zpq:3, 7zrs:3, 7zs5:4, 7zuw:3, 7zux:3, 7zw0:LD)
    aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagc
gaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgccccuugguauuccagggggcaugccuguuugag
cgucauuu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>..............>>>..)...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
........
    		 ? GO:0000448 ... P05740 30814529
    5 6n8n:k
    (3.8)    		 BS02 >6n8n:C (identical to 8aaf:i, 8agt:i, 8agu:i, 8agv:i, 8agw:i, 8agx:i, 8agz:i, 5apn:8, 5apo:8, 7azy:G, 7b7d:LC, 8bip:C3, 8bjq:C3, 8bn3:4, 8bqd:BS, 8bqx:BS, 7bt6:2, 7btb:2, 6c0f:2, 6cb1:2, 8ccs:CC, 8cdl:CC, 8cdr:CC, 8ceh:CC, 8cf5:CC, 8cg8:CC, 8cgn:CC, 8civ:CC, 8cku:CC, 8cmj:CC, 5dat:4, 5dat:8, 5dc3:4, 5dc3:8, 5dge:4, 5dge:8, 5dgf:4, 5dgf:8, 5dgv:4, 5dgv:8, 6elz:2, 6em1:2, 6em4:2, 6em5:2, 8eub:A4, 8evp:A4, 8evq:A4, 8evr:A4, 8evs:A4, 8evt:A4, 8ewb:A4, 8ewc:A4, 5fci:4, 5fci:8, 5fcj:4, 5fcj:8, 5gak:4, 6gq1:4, 6gqb:4, 6gqv:4, 5h4p:4, 6hd7:4, 6hhq:4, 6hhq:AT, 5i4l:4, 5i4l:8, 3j6x:8S, 3j6y:8S, 3j77:8S, 3j78:8S, 3jct:2, 5jcs:y, 5juo:C, 5jup:C, 5jus:C, 5jut:C, 5juu:C, 8k82:C3, 5lyb:4, 5lyb:8, 5m1j:44, 6m62:2, 5mc6:BS, 5mei:4, 5mei:AT, 7mpi:A4, 7mpj:A4, 6n8j:3, 6n8m:C, 6n8o:C, 7n8b:A4, 7nac:2, 5ndg:4, 5ndv:8, 5ndw:4, 5ndw:8, 7nrc:LC, 7nrd:LC, 5obm:8, 7of1:2, 7ohq:2, 7ohr:2, 6oig:8, 5on6:4, 5on6:AT, 7osa:58S, 7osm:58S, 8p8m:LD, 8p8u:LD, 8pfr:LD, 6q8y:BS, 7r7a:2, 6r84:4, 6r86:4, 6r87:4, 7rr5:C3, 6s47:AC, 6snt:3, 6t4q:C3, 5t62:C, 5t6r:C, 6t7i:C3, 6t7t:C3, 6t83:3b, 5tbw:4, 5tbw:AT, 6tb3:BS, 5tga:4, 5tga:8, 5tgm:4, 5tgm:8, 6tnu:BS, 7too:A58S, 7top:A58S, 7u0h:2, 4u3m:4, 4u3m:8, 4u3n:4, 4u3n:8, 4u3u:4, 4u3u:8, 4u4n:4, 4u4n:8, 4u4o:4, 4u4o:8, 4u4q:4, 4u4q:8, 4u4r:4, 4u4r:8, 4u4u:4, 4u4u:8, 4u4y:4, 4u4y:8, 4u4z:4, 4u4z:8, 4u50:4, 4u50:8, 4u51:4, 4u51:8, 4u52:4, 4u52:8, 4u53:4, 4u53:8, 4u55:4, 4u55:8, 4u56:4, 4u56:8, 4u6f:4, 4u6f:8, 7ug6:2, 7uoo:2, 7uqb:2, 7uqz:2, 7v08:2, 4v7r:B3, 4v7r:D3, 4v88:A4, 4v88:A8, 4v8t:8, 4v8y:B8, 4v8z:B8, 4v91:4, 6xiq:4, 6xir:4, 8y0u:C3, 6ylx:2, 6yly:3, 7zpq:3, 7zrs:3, 7zs5:4, 7zuw:3, 7zux:3, 7zw0:LD)
    aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagc
gaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgccccuugguauuccagggggcaugccuguuugag
cgucauuu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>..............>>>..)...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
........
    		 ? GO:0000027 ... P04456 30814529
    6 6n8n:l
    (3.8)    		 BS02 >6n8n:C (identical to 8aaf:i, 8agt:i, 8agu:i, 8agv:i, 8agw:i, 8agx:i, 8agz:i, 5apn:8, 5apo:8, 7azy:G, 7b7d:LC, 8bip:C3, 8bjq:C3, 8bn3:4, 8bqd:BS, 8bqx:BS, 7bt6:2, 7btb:2, 6c0f:2, 6cb1:2, 8ccs:CC, 8cdl:CC, 8cdr:CC, 8ceh:CC, 8cf5:CC, 8cg8:CC, 8cgn:CC, 8civ:CC, 8cku:CC, 8cmj:CC, 5dat:4, 5dat:8, 5dc3:4, 5dc3:8, 5dge:4, 5dge:8, 5dgf:4, 5dgf:8, 5dgv:4, 5dgv:8, 6elz:2, 6em1:2, 6em4:2, 6em5:2, 8eub:A4, 8evp:A4, 8evq:A4, 8evr:A4, 8evs:A4, 8evt:A4, 8ewb:A4, 8ewc:A4, 5fci:4, 5fci:8, 5fcj:4, 5fcj:8, 5gak:4, 6gq1:4, 6gqb:4, 6gqv:4, 5h4p:4, 6hd7:4, 6hhq:4, 6hhq:AT, 5i4l:4, 5i4l:8, 3j6x:8S, 3j6y:8S, 3j77:8S, 3j78:8S, 3jct:2, 5jcs:y, 5juo:C, 5jup:C, 5jus:C, 5jut:C, 5juu:C, 8k82:C3, 5lyb:4, 5lyb:8, 5m1j:44, 6m62:2, 5mc6:BS, 5mei:4, 5mei:AT, 7mpi:A4, 7mpj:A4, 6n8j:3, 6n8m:C, 6n8o:C, 7n8b:A4, 7nac:2, 5ndg:4, 5ndv:8, 5ndw:4, 5ndw:8, 7nrc:LC, 7nrd:LC, 5obm:8, 7of1:2, 7ohq:2, 7ohr:2, 6oig:8, 5on6:4, 5on6:AT, 7osa:58S, 7osm:58S, 8p8m:LD, 8p8u:LD, 8pfr:LD, 6q8y:BS, 7r7a:2, 6r84:4, 6r86:4, 6r87:4, 7rr5:C3, 6s47:AC, 6snt:3, 6t4q:C3, 5t62:C, 5t6r:C, 6t7i:C3, 6t7t:C3, 6t83:3b, 5tbw:4, 5tbw:AT, 6tb3:BS, 5tga:4, 5tga:8, 5tgm:4, 5tgm:8, 6tnu:BS, 7too:A58S, 7top:A58S, 7u0h:2, 4u3m:4, 4u3m:8, 4u3n:4, 4u3n:8, 4u3u:4, 4u3u:8, 4u4n:4, 4u4n:8, 4u4o:4, 4u4o:8, 4u4q:4, 4u4q:8, 4u4r:4, 4u4r:8, 4u4u:4, 4u4u:8, 4u4y:4, 4u4y:8, 4u4z:4, 4u4z:8, 4u50:4, 4u50:8, 4u51:4, 4u51:8, 4u52:4, 4u52:8, 4u53:4, 4u53:8, 4u55:4, 4u55:8, 4u56:4, 4u56:8, 4u6f:4, 4u6f:8, 7ug6:2, 7uoo:2, 7uqb:2, 7uqz:2, 7v08:2, 4v7r:B3, 4v7r:D3, 4v88:A4, 4v88:A8, 4v8t:8, 4v8y:B8, 4v8z:B8, 4v91:4, 6xiq:4, 6xir:4, 8y0u:C3, 6ylx:2, 6yly:3, 7zpq:3, 7zrs:3, 7zs5:4, 7zuw:3, 7zux:3, 7zw0:LD)
    aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagc
gaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgccccuugguauuccagggggcaugccuguuugag
cgucauuu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>..............>>>..)...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
........
    		 ? GO:0002181 ... P05743 30814529
    7 6n8n:u
    (3.8)    		 BS02 >6n8n:C (identical to 8aaf:i, 8agt:i, 8agu:i, 8agv:i, 8agw:i, 8agx:i, 8agz:i, 5apn:8, 5apo:8, 7azy:G, 7b7d:LC, 8bip:C3, 8bjq:C3, 8bn3:4, 8bqd:BS, 8bqx:BS, 7bt6:2, 7btb:2, 6c0f:2, 6cb1:2, 8ccs:CC, 8cdl:CC, 8cdr:CC, 8ceh:CC, 8cf5:CC, 8cg8:CC, 8cgn:CC, 8civ:CC, 8cku:CC, 8cmj:CC, 5dat:4, 5dat:8, 5dc3:4, 5dc3:8, 5dge:4, 5dge:8, 5dgf:4, 5dgf:8, 5dgv:4, 5dgv:8, 6elz:2, 6em1:2, 6em4:2, 6em5:2, 8eub:A4, 8evp:A4, 8evq:A4, 8evr:A4, 8evs:A4, 8evt:A4, 8ewb:A4, 8ewc:A4, 5fci:4, 5fci:8, 5fcj:4, 5fcj:8, 5gak:4, 6gq1:4, 6gqb:4, 6gqv:4, 5h4p:4, 6hd7:4, 6hhq:4, 6hhq:AT, 5i4l:4, 5i4l:8, 3j6x:8S, 3j6y:8S, 3j77:8S, 3j78:8S, 3jct:2, 5jcs:y, 5juo:C, 5jup:C, 5jus:C, 5jut:C, 5juu:C, 8k82:C3, 5lyb:4, 5lyb:8, 5m1j:44, 6m62:2, 5mc6:BS, 5mei:4, 5mei:AT, 7mpi:A4, 7mpj:A4, 6n8j:3, 6n8m:C, 6n8o:C, 7n8b:A4, 7nac:2, 5ndg:4, 5ndv:8, 5ndw:4, 5ndw:8, 7nrc:LC, 7nrd:LC, 5obm:8, 7of1:2, 7ohq:2, 7ohr:2, 6oig:8, 5on6:4, 5on6:AT, 7osa:58S, 7osm:58S, 8p8m:LD, 8p8u:LD, 8pfr:LD, 6q8y:BS, 7r7a:2, 6r84:4, 6r86:4, 6r87:4, 7rr5:C3, 6s47:AC, 6snt:3, 6t4q:C3, 5t62:C, 5t6r:C, 6t7i:C3, 6t7t:C3, 6t83:3b, 5tbw:4, 5tbw:AT, 6tb3:BS, 5tga:4, 5tga:8, 5tgm:4, 5tgm:8, 6tnu:BS, 7too:A58S, 7top:A58S, 7u0h:2, 4u3m:4, 4u3m:8, 4u3n:4, 4u3n:8, 4u3u:4, 4u3u:8, 4u4n:4, 4u4n:8, 4u4o:4, 4u4o:8, 4u4q:4, 4u4q:8, 4u4r:4, 4u4r:8, 4u4u:4, 4u4u:8, 4u4y:4, 4u4y:8, 4u4z:4, 4u4z:8, 4u50:4, 4u50:8, 4u51:4, 4u51:8, 4u52:4, 4u52:8, 4u53:4, 4u53:8, 4u55:4, 4u55:8, 4u56:4, 4u56:8, 4u6f:4, 4u6f:8, 7ug6:2, 7uoo:2, 7uqb:2, 7uqz:2, 7v08:2, 4v7r:B3, 4v7r:D3, 4v88:A4, 4v88:A8, 4v8t:8, 4v8y:B8, 4v8z:B8, 4v91:4, 6xiq:4, 6xir:4, 8y0u:C3, 6ylx:2, 6yly:3, 7zpq:3, 7zrs:3, 7zs5:4, 7zuw:3, 7zux:3, 7zw0:LD)
    aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagc
gaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgccccuugguauuccagggggcaugccuguuugag
cgucauuu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>..............>>>..)...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
........
    		 ? GO:0000463 ... P0CX84 30814529
    8 6n8n:w
    (3.8)    		 BS02 >6n8n:C (identical to 8aaf:i, 8agt:i, 8agu:i, 8agv:i, 8agw:i, 8agx:i, 8agz:i, 5apn:8, 5apo:8, 7azy:G, 7b7d:LC, 8bip:C3, 8bjq:C3, 8bn3:4, 8bqd:BS, 8bqx:BS, 7bt6:2, 7btb:2, 6c0f:2, 6cb1:2, 8ccs:CC, 8cdl:CC, 8cdr:CC, 8ceh:CC, 8cf5:CC, 8cg8:CC, 8cgn:CC, 8civ:CC, 8cku:CC, 8cmj:CC, 5dat:4, 5dat:8, 5dc3:4, 5dc3:8, 5dge:4, 5dge:8, 5dgf:4, 5dgf:8, 5dgv:4, 5dgv:8, 6elz:2, 6em1:2, 6em4:2, 6em5:2, 8eub:A4, 8evp:A4, 8evq:A4, 8evr:A4, 8evs:A4, 8evt:A4, 8ewb:A4, 8ewc:A4, 5fci:4, 5fci:8, 5fcj:4, 5fcj:8, 5gak:4, 6gq1:4, 6gqb:4, 6gqv:4, 5h4p:4, 6hd7:4, 6hhq:4, 6hhq:AT, 5i4l:4, 5i4l:8, 3j6x:8S, 3j6y:8S, 3j77:8S, 3j78:8S, 3jct:2, 5jcs:y, 5juo:C, 5jup:C, 5jus:C, 5jut:C, 5juu:C, 8k82:C3, 5lyb:4, 5lyb:8, 5m1j:44, 6m62:2, 5mc6:BS, 5mei:4, 5mei:AT, 7mpi:A4, 7mpj:A4, 6n8j:3, 6n8m:C, 6n8o:C, 7n8b:A4, 7nac:2, 5ndg:4, 5ndv:8, 5ndw:4, 5ndw:8, 7nrc:LC, 7nrd:LC, 5obm:8, 7of1:2, 7ohq:2, 7ohr:2, 6oig:8, 5on6:4, 5on6:AT, 7osa:58S, 7osm:58S, 8p8m:LD, 8p8u:LD, 8pfr:LD, 6q8y:BS, 7r7a:2, 6r84:4, 6r86:4, 6r87:4, 7rr5:C3, 6s47:AC, 6snt:3, 6t4q:C3, 5t62:C, 5t6r:C, 6t7i:C3, 6t7t:C3, 6t83:3b, 5tbw:4, 5tbw:AT, 6tb3:BS, 5tga:4, 5tga:8, 5tgm:4, 5tgm:8, 6tnu:BS, 7too:A58S, 7top:A58S, 7u0h:2, 4u3m:4, 4u3m:8, 4u3n:4, 4u3n:8, 4u3u:4, 4u3u:8, 4u4n:4, 4u4n:8, 4u4o:4, 4u4o:8, 4u4q:4, 4u4q:8, 4u4r:4, 4u4r:8, 4u4u:4, 4u4u:8, 4u4y:4, 4u4y:8, 4u4z:4, 4u4z:8, 4u50:4, 4u50:8, 4u51:4, 4u51:8, 4u52:4, 4u52:8, 4u53:4, 4u53:8, 4u55:4, 4u55:8, 4u56:4, 4u56:8, 4u6f:4, 4u6f:8, 7ug6:2, 7uoo:2, 7uqb:2, 7uqz:2, 7v08:2, 4v7r:B3, 4v7r:D3, 4v88:A4, 4v88:A8, 4v8t:8, 4v8y:B8, 4v8z:B8, 4v91:4, 6xiq:4, 6xir:4, 8y0u:C3, 6ylx:2, 6yly:3, 7zpq:3, 7zrs:3, 7zs5:4, 7zuw:3, 7zux:3, 7zw0:LD)
    aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagc
gaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgccccuugguauuccagggggcaugccuguuugag
cgucauuu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>..............>>>..)...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
........
    		 ? GO:0000448 ... P49166 30814529
    9 6n8n:y
    (3.8)    		 BS02 >6n8n:C (identical to 8aaf:i, 8agt:i, 8agu:i, 8agv:i, 8agw:i, 8agx:i, 8agz:i, 5apn:8, 5apo:8, 7azy:G, 7b7d:LC, 8bip:C3, 8bjq:C3, 8bn3:4, 8bqd:BS, 8bqx:BS, 7bt6:2, 7btb:2, 6c0f:2, 6cb1:2, 8ccs:CC, 8cdl:CC, 8cdr:CC, 8ceh:CC, 8cf5:CC, 8cg8:CC, 8cgn:CC, 8civ:CC, 8cku:CC, 8cmj:CC, 5dat:4, 5dat:8, 5dc3:4, 5dc3:8, 5dge:4, 5dge:8, 5dgf:4, 5dgf:8, 5dgv:4, 5dgv:8, 6elz:2, 6em1:2, 6em4:2, 6em5:2, 8eub:A4, 8evp:A4, 8evq:A4, 8evr:A4, 8evs:A4, 8evt:A4, 8ewb:A4, 8ewc:A4, 5fci:4, 5fci:8, 5fcj:4, 5fcj:8, 5gak:4, 6gq1:4, 6gqb:4, 6gqv:4, 5h4p:4, 6hd7:4, 6hhq:4, 6hhq:AT, 5i4l:4, 5i4l:8, 3j6x:8S, 3j6y:8S, 3j77:8S, 3j78:8S, 3jct:2, 5jcs:y, 5juo:C, 5jup:C, 5jus:C, 5jut:C, 5juu:C, 8k82:C3, 5lyb:4, 5lyb:8, 5m1j:44, 6m62:2, 5mc6:BS, 5mei:4, 5mei:AT, 7mpi:A4, 7mpj:A4, 6n8j:3, 6n8m:C, 6n8o:C, 7n8b:A4, 7nac:2, 5ndg:4, 5ndv:8, 5ndw:4, 5ndw:8, 7nrc:LC, 7nrd:LC, 5obm:8, 7of1:2, 7ohq:2, 7ohr:2, 6oig:8, 5on6:4, 5on6:AT, 7osa:58S, 7osm:58S, 8p8m:LD, 8p8u:LD, 8pfr:LD, 6q8y:BS, 7r7a:2, 6r84:4, 6r86:4, 6r87:4, 7rr5:C3, 6s47:AC, 6snt:3, 6t4q:C3, 5t62:C, 5t6r:C, 6t7i:C3, 6t7t:C3, 6t83:3b, 5tbw:4, 5tbw:AT, 6tb3:BS, 5tga:4, 5tga:8, 5tgm:4, 5tgm:8, 6tnu:BS, 7too:A58S, 7top:A58S, 7u0h:2, 4u3m:4, 4u3m:8, 4u3n:4, 4u3n:8, 4u3u:4, 4u3u:8, 4u4n:4, 4u4n:8, 4u4o:4, 4u4o:8, 4u4q:4, 4u4q:8, 4u4r:4, 4u4r:8, 4u4u:4, 4u4u:8, 4u4y:4, 4u4y:8, 4u4z:4, 4u4z:8, 4u50:4, 4u50:8, 4u51:4, 4u51:8, 4u52:4, 4u52:8, 4u53:4, 4u53:8, 4u55:4, 4u55:8, 4u56:4, 4u56:8, 4u6f:4, 4u6f:8, 7ug6:2, 7uoo:2, 7uqb:2, 7uqz:2, 7v08:2, 4v7r:B3, 4v7r:D3, 4v88:A4, 4v88:A8, 4v8t:8, 4v8y:B8, 4v8z:B8, 4v91:4, 6xiq:4, 6xir:4, 8y0u:C3, 6ylx:2, 6yly:3, 7zpq:3, 7zrs:3, 7zs5:4, 7zuw:3, 7zux:3, 7zw0:LD)
    aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagc
gaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgccccuugguauuccagggggcaugccuguuugag
cgucauuu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>..............>>>..)...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
........
    		 ? GO:0002181 ... P04650 30814529
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218