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BioLiP
Download all results in tab-seperated text for 19 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6qyb:B (1.18) BS01 CU1 ? N/A Q9X8F4 31111982
    2 6qyb:B (1.18) BS02 CU1 ? N/A Q9X8F4 31111982
    3 6qyb:B (1.18) BS03 CU1 ? N/A Q9X8F4 31111982
    4 6qyb:B (1.18) BS04 CU1 ? N/A Q9X8F4 31111982
    5 6qyb:B (1.18) BS05 CU1 ? N/A Q9X8F4 31111982
    6 6qyb:B (1.18) BS06 CU1 ? N/A Q9X8F4 31111982
    7 6qyb:B (1.18) BS07 CU1 ? N/A Q9X8F4 31111982
    8 6qyb:B (1.18) BS08 CU1 ? N/A Q9X8F4 31111982
    9 6qyb:B (1.18) BS09 CU1 ? N/A Q9X8F4 31111982
    10 6qyb:B (1.18) BS10 CU1 ? N/A Q9X8F4 31111982
    11 6qyb:B (1.18) BS11 CU1 ? N/A Q9X8F4 31111982
    12 6qyb:B (1.18) BS12 CU1 ? N/A Q9X8F4 31111982
    13 6qyb:B (1.18) BS13 CU1 ? N/A Q9X8F4 31111982
    14 6qyb:B (1.18) BS14 CU1 ? N/A Q9X8F4 31111982
    15 6qyb:B (1.18) BS15 CU1 ? N/A Q9X8F4 31111982
    16 6qyb:B (1.18) BS16 CU1 ? N/A Q9X8F4 31111982
    17 6qyb:B (1.18) BS17 CU1 ? N/A Q9X8F4 31111982
    18 6qyb:B (1.18) BS18 CU1 ? N/A Q9X8F4 31111982
    19 6qyb:B (1.18) BS19 CU1 ? N/A Q9X8F4 31111982
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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