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BioLiP
Download all results in tab-seperated text for 67 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6igz:9 (3.49) BS01 CLA ? GO:0009416 ... A0A4V8H002 30850820
    2 6igz:A (3.49) BS50 CLA 1.97.1.12 GO:0009522 ... A0A4V8GZZ2 30850820
    3 6igz:A (3.49) BS51 SF4 1.97.1.12 GO:0009522 ... A0A4V8GZZ2 30850820
    4 6igz:A (3.49) BS52 CLA 1.97.1.12 GO:0009522 ... A0A4V8GZZ2 30850820
    5 6igz:A (3.49) BS53 CLA 1.97.1.12 GO:0009522 ... A0A4V8GZZ2 30850820
    6 6igz:A (3.49) BS54 CLA 1.97.1.12 GO:0009522 ... A0A4V8GZZ2 30850820
    7 6igz:A (3.49) BS55 CLA 1.97.1.12 GO:0009522 ... A0A4V8GZZ2 30850820
    8 6igz:B (3.49) BS01 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    9 6igz:B (3.49) BS02 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    10 6igz:B (3.49) BS03 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    11 6igz:B (3.49) BS04 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    12 6igz:B (3.49) BS05 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    13 6igz:B (3.49) BS06 SF4 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    14 6igz:B (3.49) BS07 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    15 6igz:B (3.49) BS08 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    16 6igz:B (3.49) BS09 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    17 6igz:B (3.49) BS10 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    18 6igz:B (3.49) BS11 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    19 6igz:B (3.49) BS12 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    20 6igz:B (3.49) BS13 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    21 6igz:B (3.49) BS14 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    22 6igz:B (3.49) BS15 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    23 6igz:B (3.49) BS16 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    24 6igz:B (3.49) BS17 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    25 6igz:B (3.49) BS18 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    26 6igz:B (3.49) BS19 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    27 6igz:B (3.49) BS20 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    28 6igz:B (3.49) BS21 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    29 6igz:B (3.49) BS22 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    30 6igz:B (3.49) BS23 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    31 6igz:B (3.49) BS24 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    32 6igz:B (3.49) BS25 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    33 6igz:B (3.49) BS26 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    34 6igz:B (3.49) BS27 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    35 6igz:B (3.49) BS28 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    36 6igz:B (3.49) BS29 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    37 6igz:B (3.49) BS30 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    38 6igz:B (3.49) BS31 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    39 6igz:B (3.49) BS32 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    40 6igz:B (3.49) BS33 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    41 6igz:B (3.49) BS34 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    42 6igz:B (3.49) BS35 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    43 6igz:B (3.49) BS36 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    44 6igz:B (3.49) BS37 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    45 6igz:B (3.49) BS38 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    46 6igz:B (3.49) BS39 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    47 6igz:B (3.49) BS40 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    48 6igz:B (3.49) BS41 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    49 6igz:B (3.49) BS42 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    50 6igz:B (3.49) BS43 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    51 6igz:B (3.49) BS44 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    52 6igz:B (3.49) BS45 PQN 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    53 6igz:B (3.49) BS46 8CT 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    54 6igz:B (3.49) BS47 8CT 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    55 6igz:B (3.49) BS48 8CT 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    56 6igz:B (3.49) BS49 8CT 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    57 6igz:B (3.49) BS50 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    58 6igz:B (3.49) BS51 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    59 6igz:B (3.49) BS52 CLA 1.97.1.12 GO:0009522 ... A0A4V8H003 30850820
    60 6igz:F (3.49) BS03 8CT ? GO:0009507 ... A0A4V8H008 30850820
    61 6igz:F (3.49) BS04 CLA ? GO:0009507 ... A0A4V8H008 30850820
    62 6igz:F (3.49) BS05 CLA ? GO:0009507 ... A0A4V8H008 30850820
    63 6igz:G (3.49) BS01 CLA N/A GO:0009522 ... N/A 30850820
    64 6igz:G (3.49) BS02 CLA N/A GO:0009522 ... N/A 30850820
    65 6igz:G (3.49) BS03 8CT N/A GO:0009522 ... N/A 30850820
    66 6igz:I (3.49) BS01 CLA ? GO:0009522 ... A0A4V8H010 30850820
    67 6igz:M (3.49) BS01 CLA ? GO:0009507 ... A0A0D6E2L8 30850820
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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