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BioLiP
Download all results in tab-seperated text for 40 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8em4:B (2.83) BS01 CA ? GO:0005509 ... A2ARV4 36750096
    2 8em4:B (2.83) BS02 CA ? GO:0005509 ... A2ARV4 36750096
    3 8em4:B (2.83) BS03 CA ? GO:0005509 ... A2ARV4 36750096
    4 8em4:B (2.83) BS04 CA ? GO:0005509 ... A2ARV4 36750096
    5 8em4:B (2.83) BS05 CA ? GO:0005509 ... A2ARV4 36750096
    6 8em4:B (2.83) BS06 CA ? GO:0005509 ... A2ARV4 36750096
    7 8em4:B (2.83) BS07 CA ? GO:0005509 ... A2ARV4 36750096
    8 8em4:B (2.83) BS08 CA ? GO:0005509 ... A2ARV4 36750096
    9 8em4:B (2.83) BS09 CA ? GO:0005509 ... A2ARV4 36750096
    10 8em4:B (2.83) BS10 CA ? GO:0005509 ... A2ARV4 36750096
    11 8em4:B (2.83) BS11 CA ? GO:0005509 ... A2ARV4 36750096
    12 8em4:B (2.83) BS12 CA ? GO:0005509 ... A2ARV4 36750096
    13 8em4:B (2.83) BS13 CA ? GO:0005509 ... A2ARV4 36750096
    14 8em4:B (2.83) BS14 CA ? GO:0005509 ... A2ARV4 36750096
    15 8em4:B (2.83) BS15 CA ? GO:0005509 ... A2ARV4 36750096
    16 8em4:B (2.83) BS16 CA ? GO:0005509 ... A2ARV4 36750096
    17 8em4:B (2.83) BS17 CA ? GO:0005509 ... A2ARV4 36750096
    18 8em4:B (2.83) BS18 CA ? GO:0005509 ... A2ARV4 36750096
    19 8em4:B (2.83) BS19 CA ? GO:0005509 ... A2ARV4 36750096
    20 8em4:B (2.83) BS20 CA ? GO:0005509 ... A2ARV4 36750096
    21 8em4:B (2.83) BS21 CA ? GO:0005509 ... A2ARV4 36750096
    22 8em4:B (2.83) BS22 CA ? GO:0005509 ... A2ARV4 36750096
    23 8em4:B (2.83) BS23 CA ? GO:0005509 ... A2ARV4 36750096
    24 8em4:B (2.83) BS24 CA ? GO:0005509 ... A2ARV4 36750096
    25 8em4:B (2.83) BS25 CA ? GO:0005509 ... A2ARV4 36750096
    26 8em4:B (2.83) BS26 CA ? GO:0005509 ... A2ARV4 36750096
    27 8em4:B (2.83) BS27 CA ? GO:0005509 ... A2ARV4 36750096
    28 8em4:B (2.83) BS28 CA ? GO:0005509 ... A2ARV4 36750096
    29 8em4:B (2.83) BS29 CA ? GO:0005509 ... A2ARV4 36750096
    30 8em4:B (2.83) BS30 CA ? GO:0005509 ... A2ARV4 36750096
    31 8em4:B (2.83) BS31 CA ? GO:0005509 ... A2ARV4 36750096
    32 8em4:B (2.83) BS32 CA ? GO:0005509 ... A2ARV4 36750096
    33 8em4:B (2.83) BS33 CA ? GO:0005509 ... A2ARV4 36750096
    34 8em4:B (2.83) BS34 CA ? GO:0005509 ... A2ARV4 36750096
    35 8em4:B (2.83) BS35 CA ? GO:0005509 ... A2ARV4 36750096
    36 8em4:B (2.83) BS36 CA ? GO:0005509 ... A2ARV4 36750096
    37 8em4:B (2.83) BS37 CA ? GO:0005509 ... A2ARV4 36750096
    38 8em4:B (2.83) BS38 CA ? GO:0005509 ... A2ARV4 36750096
    39 8em4:B (2.83) BS39 CA ? GO:0005509 ... A2ARV4 36750096
    40 8em4:B (2.83) BS40 CA ? GO:0005509 ... A2ARV4 36750096
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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