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BioLiP
Download all results in tab-seperated text for 62 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7blz:A (3.1) BS49 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    2 7blz:A (3.1) BS50 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    3 7blz:A (3.1) BS51 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    4 7blz:A (3.1) BS52 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    5 7blz:A (3.1) BS53 CLA 1.97.1.12 GO:0000287 ... Q85FY7 N/A
    6 7blz:B (3.1) BS01 peptide 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    7 7blz:B (3.1) BS02 CL0 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    8 7blz:B (3.1) BS03 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    9 7blz:B (3.1) BS04 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    10 7blz:B (3.1) BS05 SF4 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    11 7blz:B (3.1) BS06 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    12 7blz:B (3.1) BS07 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    13 7blz:B (3.1) BS08 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    14 7blz:B (3.1) BS09 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    15 7blz:B (3.1) BS10 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    16 7blz:B (3.1) BS11 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    17 7blz:B (3.1) BS12 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    18 7blz:B (3.1) BS13 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    19 7blz:B (3.1) BS14 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    20 7blz:B (3.1) BS15 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    21 7blz:B (3.1) BS16 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    22 7blz:B (3.1) BS17 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    23 7blz:B (3.1) BS18 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    24 7blz:B (3.1) BS19 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    25 7blz:B (3.1) BS20 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    26 7blz:B (3.1) BS21 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    27 7blz:B (3.1) BS22 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    28 7blz:B (3.1) BS23 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    29 7blz:B (3.1) BS24 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    30 7blz:B (3.1) BS25 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    31 7blz:B (3.1) BS26 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    32 7blz:B (3.1) BS27 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    33 7blz:B (3.1) BS28 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    34 7blz:B (3.1) BS29 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    35 7blz:B (3.1) BS30 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    36 7blz:B (3.1) BS31 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    37 7blz:B (3.1) BS32 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    38 7blz:B (3.1) BS33 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    39 7blz:B (3.1) BS34 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    40 7blz:B (3.1) BS35 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    41 7blz:B (3.1) BS36 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    42 7blz:B (3.1) BS37 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    43 7blz:B (3.1) BS38 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    44 7blz:B (3.1) BS39 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    45 7blz:B (3.1) BS40 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    46 7blz:B (3.1) BS41 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    47 7blz:B (3.1) BS42 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    48 7blz:B (3.1) BS43 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    49 7blz:B (3.1) BS44 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    50 7blz:B (3.1) BS45 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    51 7blz:B (3.1) BS46 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    52 7blz:B (3.1) BS47 PQN 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    53 7blz:B (3.1) BS48 CA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    54 7blz:B (3.1) BS49 CA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    55 7blz:B (3.1) BS50 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    56 7blz:B (3.1) BS51 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    57 7blz:B (3.1) BS52 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    58 7blz:B (3.1) BS53 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    59 7blz:B (3.1) BS54 CLA 1.97.1.12 GO:0000287 ... Q85FY6 N/A
    60 7blz:F (3.1) BS03 CLA ? GO:0009507 ... Q85FS9 N/A
    61 7blz:I (3.1) BS02 CLA ? GO:0009507 ... Q85FQ6 N/A
    62 7blz:J (3.1) BS03 CLA ? GO:0009507 ... Q85FS8 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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