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BioLiP
Download all results in tab-seperated text for 41 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6lu1:A (3.2) BS42 CLA 1.97.1.12 GO:0000287 ... P0A405 33686186
    2 6lu1:A (3.2) BS43 CLA 1.97.1.12 GO:0000287 ... P0A405 33686186
    3 6lu1:A (3.2) BS44 SF4 1.97.1.12 GO:0000287 ... P0A405 33686186
    4 6lu1:B (3.2) BS01 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    5 6lu1:B (3.2) BS02 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    6 6lu1:B (3.2) BS03 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    7 6lu1:B (3.2) BS04 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    8 6lu1:B (3.2) BS05 SF4 1.97.1.12 GO:0000287 ... P0A407 33686186
    9 6lu1:B (3.2) BS06 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    10 6lu1:B (3.2) BS07 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    11 6lu1:B (3.2) BS08 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    12 6lu1:B (3.2) BS09 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    13 6lu1:B (3.2) BS10 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    14 6lu1:B (3.2) BS11 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    15 6lu1:B (3.2) BS12 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    16 6lu1:B (3.2) BS13 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    17 6lu1:B (3.2) BS14 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    18 6lu1:B (3.2) BS15 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    19 6lu1:B (3.2) BS16 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    20 6lu1:B (3.2) BS17 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    21 6lu1:B (3.2) BS18 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    22 6lu1:B (3.2) BS19 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    23 6lu1:B (3.2) BS20 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    24 6lu1:B (3.2) BS21 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    25 6lu1:B (3.2) BS22 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    26 6lu1:B (3.2) BS23 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    27 6lu1:B (3.2) BS24 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    28 6lu1:B (3.2) BS25 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    29 6lu1:B (3.2) BS26 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    30 6lu1:B (3.2) BS27 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    31 6lu1:B (3.2) BS28 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    32 6lu1:B (3.2) BS29 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    33 6lu1:B (3.2) BS30 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    34 6lu1:B (3.2) BS31 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    35 6lu1:B (3.2) BS32 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    36 6lu1:B (3.2) BS33 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    37 6lu1:B (3.2) BS34 CLA 1.97.1.12 GO:0000287 ... P0A407 33686186
    38 6lu1:B (3.2) BS35 PQN 1.97.1.12 GO:0000287 ... P0A407 33686186
    39 6lu1:I (3.2) BS01 CLA ? GO:0009522 ... P0A427 33686186
    40 6lu1:I (3.2) BS02 CLA ? GO:0009522 ... P0A427 33686186
    41 6lu1:M (3.2) BS01 CLA ? GO:0009522 ... P0A403 33686186
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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