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BioLiP
Download all results in tab-seperated text for 64 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7dz7:9 (2.84) BS01 CLA ? GO:0009416 ... A8ITV3 34239095
    2 7dz7:A (2.84) BS48 CLA 1.97.1.12 GO:0000287 ... P12154 34239095
    3 7dz7:A (2.84) BS49 CLA 1.97.1.12 GO:0000287 ... P12154 34239095
    4 7dz7:A (2.84) BS50 CLA 1.97.1.12 GO:0000287 ... P12154 34239095
    5 7dz7:B (2.84) BS01 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    6 7dz7:B (2.84) BS02 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    7 7dz7:B (2.84) BS03 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    8 7dz7:B (2.84) BS04 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    9 7dz7:B (2.84) BS05 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    10 7dz7:B (2.84) BS06 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    11 7dz7:B (2.84) BS07 SF4 1.97.1.12 GO:0000287 ... P09144 34239095
    12 7dz7:B (2.84) BS08 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    13 7dz7:B (2.84) BS09 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    14 7dz7:B (2.84) BS10 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    15 7dz7:B (2.84) BS11 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    16 7dz7:B (2.84) BS12 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    17 7dz7:B (2.84) BS13 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    18 7dz7:B (2.84) BS14 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    19 7dz7:B (2.84) BS15 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    20 7dz7:B (2.84) BS16 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    21 7dz7:B (2.84) BS17 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    22 7dz7:B (2.84) BS18 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    23 7dz7:B (2.84) BS19 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    24 7dz7:B (2.84) BS20 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    25 7dz7:B (2.84) BS21 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    26 7dz7:B (2.84) BS22 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    27 7dz7:B (2.84) BS23 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    28 7dz7:B (2.84) BS24 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    29 7dz7:B (2.84) BS25 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    30 7dz7:B (2.84) BS26 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    31 7dz7:B (2.84) BS27 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    32 7dz7:B (2.84) BS28 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    33 7dz7:B (2.84) BS29 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    34 7dz7:B (2.84) BS30 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    35 7dz7:B (2.84) BS31 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    36 7dz7:B (2.84) BS32 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    37 7dz7:B (2.84) BS33 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    38 7dz7:B (2.84) BS34 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    39 7dz7:B (2.84) BS35 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    40 7dz7:B (2.84) BS36 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    41 7dz7:B (2.84) BS37 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    42 7dz7:B (2.84) BS38 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    43 7dz7:B (2.84) BS39 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    44 7dz7:B (2.84) BS40 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    45 7dz7:B (2.84) BS41 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    46 7dz7:B (2.84) BS42 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    47 7dz7:B (2.84) BS43 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    48 7dz7:B (2.84) BS44 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    49 7dz7:B (2.84) BS45 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    50 7dz7:B (2.84) BS46 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    51 7dz7:B (2.84) BS47 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    52 7dz7:B (2.84) BS48 PQN 1.97.1.12 GO:0000287 ... P09144 34239095
    53 7dz7:B (2.84) BS49 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    54 7dz7:B (2.84) BS50 CLA 1.97.1.12 GO:0000287 ... P09144 34239095
    55 7dz7:F (2.84) BS02 CLA ? GO:0005515 ... P12356 34239095
    56 7dz7:F (2.84) BS03 CLA ? GO:0005515 ... P12356 34239095
    57 7dz7:G (2.84) BS01 CLA ? GO:0009507 ... P14224 34239095
    58 7dz7:G (2.84) BS02 CLA ? GO:0009507 ... P14224 34239095
    59 7dz7:H (2.84) BS01 CLA ? GO:0009507 ... P13352 34239095
    60 7dz7:I (2.84) BS01 CLA ? GO:0009522 ... A8IFG7 34239095
    61 7dz7:I (2.84) BS02 CLA ? GO:0009522 ... A8IFG7 34239095
    62 7dz7:J (2.84) BS02 CLA ? GO:0009507 ... P59777 34239095
    63 7dz7:L (2.84) BS03 CLA ? GO:0009522 ... A8IL32 34239095
    64 7dz7:L (2.84) BS04 CLA ? GO:0009522 ... A8IL32 34239095
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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