BioLiP

Download all results in tab-seperated text for 5 receptor-ligand interactions, whose format is explained at readme.txt.

Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.

Click Site # to view the binding site structure. Hover over Site # to view the binding residues.

The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.

Hover over EC number to view the full name of enzymatic activity.

Hover over GO terms to view all GO terms.

Hover over UniProt to view the protein name.

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#	PDB (resolution)	Site #	RNA sequence	EC number	GO terms	UniProt	PubMed
1	7nhn:4 (2.9)	BS01	>7nhn:B (identical to 8uu4:B, 8uu5:B, 8uu6:B, 8uu7:B, 8uu8:B, 8uu9:B, 8uua:B) cugguaguuauggcgagaaggucacacccguucccaucccgaacacggua guuaagcuucucugcgccaaugguaguugggggcuucccccugcgagagu aggucgcugccggg <<<<<<<<....<<<<<<<<.....<<<<<...............>>>.. >>....>>>>>>.>><<<.......<<.<<<<<...>>>>>.>>...... .>>>.>>>>>>>>.	?	GO:0003735 ...	P0A485	34117249
2	7nhn:J (2.9)	BS02	>7nhn:B (identical to 8uu4:B, 8uu5:B, 8uu6:B, 8uu7:B, 8uu8:B, 8uu9:B, 8uua:B) cugguaguuauggcgagaaggucacacccguucccaucccgaacacggua guuaagcuucucugcgccaaugguaguugggggcuucccccugcgagagu aggucgcugccggg <<<<<<<<....<<<<<<<<.....<<<<<...............>>>.. >>....>>>>>>.>><<<.......<<.<<<<<...>>>>>.>>...... .>>>.>>>>>>>>.	?	GO:0000049 ...	Q927L9	34117249
3	7nhn:P (2.9)	BS02	>7nhn:B (identical to 8uu4:B, 8uu5:B, 8uu6:B, 8uu7:B, 8uu8:B, 8uu9:B, 8uua:B) cugguaguuauggcgagaaggucacacccguucccaucccgaacacggua guuaagcuucucugcgccaaugguaguugggggcuucccccugcgagagu aggucgcugccggg <<<<<<<<....<<<<<<<<.....<<<<<...............>>>.. >>....>>>>>>.>><<<.......<<.<<<<<...>>>>>.>>...... .>>>.>>>>>>>>.	?	GO:0000049 ...	Q927L4	34117249
4	7nhn:R (2.9)	BS02	>7nhn:B (identical to 8uu4:B, 8uu5:B, 8uu6:B, 8uu7:B, 8uu8:B, 8uu9:B, 8uua:B) cugguaguuauggcgagaaggucacacccguucccaucccgaacacggua guuaagcuucucugcgccaaugguaguugggggcuucccccugcgagagu aggucgcugccggg <<<<<<<<....<<<<<<<<.....<<<<<...............>>>.. >>....>>>>>>.>><<<.......<<.<<<<<...>>>>>.>>...... .>>>.>>>>>>>>.	?	GO:0003735 ...	Q8Y445	34117249
5	7nhn:Z (2.9)	BS02	>7nhn:B (identical to 8uu4:B, 8uu5:B, 8uu6:B, 8uu7:B, 8uu8:B, 8uu9:B, 8uua:B) cugguaguuauggcgagaaggucacacccguucccaucccgaacacggua guuaagcuucucugcgccaaugguaguugggggcuucccccugcgagagu aggucgcugccggg <<<<<<<<....<<<<<<<<.....<<<<<...............>>>.. >>....>>>>>>.>><<<.......<<.<<<<<...>>>>>.>>...... .>>>.>>>>>>>>.	?	GO:0003735 ...	P66125	34117249