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BioLiP
Download all results in tab-seperated text for 44 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 8em7:A (2.97) BS01 CA ? GO:0005509 ... A2ARV4 36750096
    2 8em7:A (2.97) BS02 CA ? GO:0005509 ... A2ARV4 36750096
    3 8em7:A (2.97) BS03 CA ? GO:0005509 ... A2ARV4 36750096
    4 8em7:A (2.97) BS04 CA ? GO:0005509 ... A2ARV4 36750096
    5 8em7:A (2.97) BS05 CA ? GO:0005509 ... A2ARV4 36750096
    6 8em7:A (2.97) BS06 CA ? GO:0005509 ... A2ARV4 36750096
    7 8em7:A (2.97) BS07 CA ? GO:0005509 ... A2ARV4 36750096
    8 8em7:A (2.97) BS08 CA ? GO:0005509 ... A2ARV4 36750096
    9 8em7:A (2.97) BS09 CA ? GO:0005509 ... A2ARV4 36750096
    10 8em7:A (2.97) BS10 CA ? GO:0005509 ... A2ARV4 36750096
    11 8em7:A (2.97) BS11 CA ? GO:0005509 ... A2ARV4 36750096
    12 8em7:A (2.97) BS12 CA ? GO:0005509 ... A2ARV4 36750096
    13 8em7:A (2.97) BS13 CA ? GO:0005509 ... A2ARV4 36750096
    14 8em7:A (2.97) BS14 CA ? GO:0005509 ... A2ARV4 36750096
    15 8em7:A (2.97) BS15 CA ? GO:0005509 ... A2ARV4 36750096
    16 8em7:A (2.97) BS16 CA ? GO:0005509 ... A2ARV4 36750096
    17 8em7:A (2.97) BS17 CA ? GO:0005509 ... A2ARV4 36750096
    18 8em7:A (2.97) BS18 CA ? GO:0005509 ... A2ARV4 36750096
    19 8em7:A (2.97) BS19 CA ? GO:0005509 ... A2ARV4 36750096
    20 8em7:A (2.97) BS20 CA ? GO:0005509 ... A2ARV4 36750096
    21 8em7:A (2.97) BS21 CA ? GO:0005509 ... A2ARV4 36750096
    22 8em7:A (2.97) BS22 CA ? GO:0005509 ... A2ARV4 36750096
    23 8em7:A (2.97) BS23 CA ? GO:0005509 ... A2ARV4 36750096
    24 8em7:A (2.97) BS24 CA ? GO:0005509 ... A2ARV4 36750096
    25 8em7:A (2.97) BS25 CA ? GO:0005509 ... A2ARV4 36750096
    26 8em7:A (2.97) BS26 CA ? GO:0005509 ... A2ARV4 36750096
    27 8em7:A (2.97) BS27 CA ? GO:0005509 ... A2ARV4 36750096
    28 8em7:A (2.97) BS28 CA ? GO:0005509 ... A2ARV4 36750096
    29 8em7:A (2.97) BS29 CA ? GO:0005509 ... A2ARV4 36750096
    30 8em7:A (2.97) BS30 CA ? GO:0005509 ... A2ARV4 36750096
    31 8em7:A (2.97) BS31 CA ? GO:0005509 ... A2ARV4 36750096
    32 8em7:A (2.97) BS32 CA ? GO:0005509 ... A2ARV4 36750096
    33 8em7:A (2.97) BS33 CA ? GO:0005509 ... A2ARV4 36750096
    34 8em7:A (2.97) BS34 CA ? GO:0005509 ... A2ARV4 36750096
    35 8em7:A (2.97) BS35 CA ? GO:0005509 ... A2ARV4 36750096
    36 8em7:A (2.97) BS36 CA ? GO:0005509 ... A2ARV4 36750096
    37 8em7:A (2.97) BS37 CA ? GO:0005509 ... A2ARV4 36750096
    38 8em7:A (2.97) BS38 CA ? GO:0005509 ... A2ARV4 36750096
    39 8em7:A (2.97) BS39 CA ? GO:0005509 ... A2ARV4 36750096
    40 8em7:A (2.97) BS40 CA ? GO:0005509 ... A2ARV4 36750096
    41 8em7:A (2.97) BS41 CA ? GO:0005509 ... A2ARV4 36750096
    42 8em7:A (2.97) BS42 CA ? GO:0005509 ... A2ARV4 36750096
    43 8em7:A (2.97) BS43 CA ? GO:0005509 ... A2ARV4 36750096
    44 8em7:A (2.97) BS44 CA ? GO:0005509 ... A2ARV4 36750096

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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