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BioLiP
Download all results in tab-seperated text for 57 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2wsc:3 (3.3) BS08 CLA ? GO:0009507 ... C6TEX2 19923216
    2 2wsc:A (3.3) BS01 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    3 2wsc:A (3.3) BS02 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    4 2wsc:A (3.3) BS03 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    5 2wsc:A (3.3) BS04 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    6 2wsc:A (3.3) BS05 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    7 2wsc:A (3.3) BS06 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    8 2wsc:A (3.3) BS07 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    9 2wsc:A (3.3) BS08 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    10 2wsc:A (3.3) BS09 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    11 2wsc:A (3.3) BS10 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    12 2wsc:A (3.3) BS11 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    13 2wsc:A (3.3) BS12 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    14 2wsc:A (3.3) BS13 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    15 2wsc:A (3.3) BS14 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    16 2wsc:A (3.3) BS15 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    17 2wsc:A (3.3) BS16 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    18 2wsc:A (3.3) BS17 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    19 2wsc:A (3.3) BS18 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    20 2wsc:A (3.3) BS19 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    21 2wsc:A (3.3) BS20 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    22 2wsc:A (3.3) BS21 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    23 2wsc:A (3.3) BS22 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    24 2wsc:A (3.3) BS23 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    25 2wsc:A (3.3) BS24 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    26 2wsc:A (3.3) BS25 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    27 2wsc:A (3.3) BS26 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    28 2wsc:A (3.3) BS27 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    29 2wsc:A (3.3) BS28 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    30 2wsc:A (3.3) BS29 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    31 2wsc:A (3.3) BS30 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    32 2wsc:A (3.3) BS31 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    33 2wsc:A (3.3) BS32 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    34 2wsc:A (3.3) BS33 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    35 2wsc:A (3.3) BS34 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    36 2wsc:A (3.3) BS35 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    37 2wsc:A (3.3) BS36 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    38 2wsc:A (3.3) BS37 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    39 2wsc:A (3.3) BS38 PQN 1.97.1.12 GO:0000287 ... P05310 19923216
    40 2wsc:A (3.3) BS39 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    41 2wsc:A (3.3) BS40 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    42 2wsc:A (3.3) BS41 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    43 2wsc:A (3.3) BS42 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    44 2wsc:A (3.3) BS43 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    45 2wsc:A (3.3) BS44 SF4 1.97.1.12 GO:0000287 ... P05310 19923216
    46 2wsc:A (3.3) BS45 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    47 2wsc:A (3.3) BS46 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    48 2wsc:B (3.3) BS01 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    49 2wsc:B (3.3) BS02 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    50 2wsc:B (3.3) BS03 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    51 2wsc:B (3.3) BS04 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    52 2wsc:F (3.3) BS01 CLA ? GO:0009507 ... P12355 19923216
    53 2wsc:L (3.3) BS01 CLA ? GO:0009507 ... Q41385 19923216
    54 2wsc:L (3.3) BS02 CLA ? GO:0009507 ... Q41385 19923216
    55 2wsc:L (3.3) BS03 CLA ? GO:0009507 ... Q41385 19923216
    56 2wsc:L (3.3) BS04 CLA ? GO:0009507 ... Q41385 19923216
    57 2wsc:L (3.3) BS05 CLA ? GO:0009507 ... Q41385 19923216
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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