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BioLiP
Download all results in tab-seperated text for 74 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7yca:3 (2.94) BS17 CLA ? GO:0009416 ... Q3B9U5 36951548
    2 7yca:3 (2.94) BS18 CLA ? GO:0009416 ... Q3B9U5 36951548
    3 7yca:3 (2.94) BS19 CLA ? GO:0009416 ... Q3B9U5 36951548
    4 7yca:A (2.94) BS01 CL0 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    5 7yca:A (2.94) BS02 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    6 7yca:A (2.94) BS03 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    7 7yca:A (2.94) BS04 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    8 7yca:A (2.94) BS05 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    9 7yca:A (2.94) BS06 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    10 7yca:A (2.94) BS07 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    11 7yca:A (2.94) BS08 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    12 7yca:A (2.94) BS09 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    13 7yca:A (2.94) BS10 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    14 7yca:A (2.94) BS11 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    15 7yca:A (2.94) BS12 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    16 7yca:A (2.94) BS13 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    17 7yca:A (2.94) BS14 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    18 7yca:A (2.94) BS15 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    19 7yca:A (2.94) BS16 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    20 7yca:A (2.94) BS17 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    21 7yca:A (2.94) BS18 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    22 7yca:A (2.94) BS19 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    23 7yca:A (2.94) BS20 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    24 7yca:A (2.94) BS21 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    25 7yca:A (2.94) BS22 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    26 7yca:A (2.94) BS23 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    27 7yca:A (2.94) BS24 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    28 7yca:A (2.94) BS25 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    29 7yca:A (2.94) BS26 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    30 7yca:A (2.94) BS27 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    31 7yca:A (2.94) BS28 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    32 7yca:A (2.94) BS29 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    33 7yca:A (2.94) BS30 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    34 7yca:A (2.94) BS31 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    35 7yca:A (2.94) BS32 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    36 7yca:A (2.94) BS33 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    37 7yca:A (2.94) BS34 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    38 7yca:A (2.94) BS35 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    39 7yca:A (2.94) BS36 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    40 7yca:A (2.94) BS37 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    41 7yca:A (2.94) BS38 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    42 7yca:A (2.94) BS39 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    43 7yca:A (2.94) BS40 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    44 7yca:A (2.94) BS41 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    45 7yca:A (2.94) BS42 PQN 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    46 7yca:A (2.94) BS43 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    47 7yca:A (2.94) BS44 SF4 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    48 7yca:A (2.94) BS45 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    49 7yca:A (2.94) BS46 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    50 7yca:A (2.94) BS47 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    51 7yca:A (2.94) BS48 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    52 7yca:A (2.94) BS49 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    53 7yca:A (2.94) BS50 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    54 7yca:A (2.94) BS51 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    55 7yca:A (2.94) BS52 CLA 1.97.1.12 GO:0000287 ... Q0P3K1 36951548
    56 7yca:B (2.94) BS01 CL0 1.97.1.12 GO:0000287 ... Q0P3K2 36951548
    57 7yca:B (2.94) BS02 CLA 1.97.1.12 GO:0000287 ... Q0P3K2 36951548
    58 7yca:B (2.94) BS03 CLA 1.97.1.12 GO:0000287 ... Q0P3K2 36951548
    59 7yca:B (2.94) BS04 CLA 1.97.1.12 GO:0000287 ... Q0P3K2 36951548
    60 7yca:B (2.94) BS05 CLA 1.97.1.12 GO:0000287 ... Q0P3K2 36951548
    61 7yca:B (2.94) BS06 CLA 1.97.1.12 GO:0000287 ... Q0P3K2 36951548
    62 7yca:B (2.94) BS07 SF4 1.97.1.12 GO:0000287 ... Q0P3K2 36951548
    63 7yca:F (2.94) BS01 CLA ? GO:0009507 ... Q01B61 36951548
    64 7yca:F (2.94) BS02 CLA ? GO:0009507 ... Q01B61 36951548
    65 7yca:J (2.94) BS01 CLA ? GO:0009507 ... Q0P3J4 36951548
    66 7yca:J (2.94) BS02 CLA ? GO:0009507 ... Q0P3J4 36951548
    67 7yca:K (2.94) BS01 CLA ? GO:0009507 ... A0A096P8E8 36951548
    68 7yca:K (2.94) BS02 CLA ? GO:0009507 ... A0A096P8E8 36951548
    69 7yca:K (2.94) BS03 CLA ? GO:0009507 ... A0A096P8E8 36951548
    70 7yca:L (2.94) BS01 CLA ? GO:0009522 ... A0A090M7B0 36951548
    71 7yca:L (2.94) BS02 CLA ? GO:0009522 ... A0A090M7B0 36951548
    72 7yca:L (2.94) BS03 CLA ? GO:0009522 ... A0A090M7B0 36951548
    73 7yca:O (2.94) BS01 CLA ? GO:0016020 ... A0A096P9N0 36951548
    74 7yca:O (2.94) BS02 CLA ? GO:0016020 ... A0A096P9N0 36951548
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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