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BioLiP
Download all results in tab-seperated text for 53 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7qco:A (3.7) BS01 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    2 7qco:A (3.7) BS02 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    3 7qco:A (3.7) BS03 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    4 7qco:A (3.7) BS04 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    5 7qco:A (3.7) BS05 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    6 7qco:A (3.7) BS06 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    7 7qco:A (3.7) BS07 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    8 7qco:A (3.7) BS08 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    9 7qco:A (3.7) BS09 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    10 7qco:A (3.7) BS10 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    11 7qco:A (3.7) BS11 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    12 7qco:A (3.7) BS12 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    13 7qco:A (3.7) BS13 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    14 7qco:A (3.7) BS14 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    15 7qco:A (3.7) BS15 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    16 7qco:A (3.7) BS16 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    17 7qco:A (3.7) BS17 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    18 7qco:A (3.7) BS18 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    19 7qco:A (3.7) BS19 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    20 7qco:A (3.7) BS20 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    21 7qco:A (3.7) BS21 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    22 7qco:A (3.7) BS22 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    23 7qco:A (3.7) BS23 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    24 7qco:A (3.7) BS24 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    25 7qco:A (3.7) BS25 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    26 7qco:A (3.7) BS26 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    27 7qco:A (3.7) BS27 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    28 7qco:A (3.7) BS28 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    29 7qco:A (3.7) BS29 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    30 7qco:A (3.7) BS30 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    31 7qco:A (3.7) BS31 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    32 7qco:A (3.7) BS32 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    33 7qco:A (3.7) BS33 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    34 7qco:A (3.7) BS34 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    35 7qco:A (3.7) BS35 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    36 7qco:A (3.7) BS36 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    37 7qco:A (3.7) BS37 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    38 7qco:A (3.7) BS38 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    39 7qco:A (3.7) BS39 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    40 7qco:A (3.7) BS40 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    41 7qco:A (3.7) BS41 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    42 7qco:A (3.7) BS42 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    43 7qco:A (3.7) BS43 PQN 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    44 7qco:A (3.7) BS44 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    45 7qco:A (3.7) BS45 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    46 7qco:A (3.7) BS46 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    47 7qco:A (3.7) BS47 SF4 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    48 7qco:A (3.7) BS48 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    49 7qco:A (3.7) BS49 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGM5 35059628
    50 7qco:B (3.7) BS01 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    51 7qco:B (3.7) BS02 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    52 7qco:B (3.7) BS03 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    53 7qco:B (3.7) BS04 CLA 1.97.1.12 GO:0000287 ... A0A2S6VGS2 35059628
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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