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BioLiP
Download all results in tab-seperated text for 65 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6hqb:A (4.0) BS01 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    2 6hqb:A (4.0) BS02 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    3 6hqb:A (4.0) BS03 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    4 6hqb:A (4.0) BS04 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    5 6hqb:A (4.0) BS05 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    6 6hqb:A (4.0) BS06 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    7 6hqb:A (4.0) BS07 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    8 6hqb:A (4.0) BS08 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    9 6hqb:A (4.0) BS09 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    10 6hqb:A (4.0) BS10 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    11 6hqb:A (4.0) BS11 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    12 6hqb:A (4.0) BS12 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    13 6hqb:A (4.0) BS13 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    14 6hqb:A (4.0) BS14 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    15 6hqb:A (4.0) BS15 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    16 6hqb:A (4.0) BS16 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    17 6hqb:A (4.0) BS17 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    18 6hqb:A (4.0) BS18 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    19 6hqb:A (4.0) BS19 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    20 6hqb:A (4.0) BS20 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    21 6hqb:A (4.0) BS21 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    22 6hqb:A (4.0) BS22 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    23 6hqb:A (4.0) BS23 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    24 6hqb:A (4.0) BS24 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    25 6hqb:A (4.0) BS25 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    26 6hqb:A (4.0) BS26 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    27 6hqb:A (4.0) BS27 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    28 6hqb:A (4.0) BS28 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    29 6hqb:A (4.0) BS29 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    30 6hqb:A (4.0) BS30 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    31 6hqb:A (4.0) BS31 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    32 6hqb:A (4.0) BS32 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    33 6hqb:A (4.0) BS33 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    34 6hqb:A (4.0) BS34 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    35 6hqb:A (4.0) BS35 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    36 6hqb:A (4.0) BS36 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    37 6hqb:A (4.0) BS37 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    38 6hqb:A (4.0) BS38 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    39 6hqb:A (4.0) BS39 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    40 6hqb:A (4.0) BS40 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    41 6hqb:A (4.0) BS41 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    42 6hqb:A (4.0) BS42 PQN 1.97.1.12 GO:0000287 ... P29254 30662446
    43 6hqb:A (4.0) BS43 SF4 1.97.1.12 GO:0000287 ... P29254 30662446
    44 6hqb:A (4.0) BS44 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    45 6hqb:A (4.0) BS45 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    46 6hqb:A (4.0) BS46 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    47 6hqb:A (4.0) BS47 45D 1.97.1.12 GO:0000287 ... P29254 30662446
    48 6hqb:A (4.0) BS48 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    49 6hqb:A (4.0) BS49 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    50 6hqb:A (4.0) BS50 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    51 6hqb:A (4.0) BS51 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    52 6hqb:A (4.0) BS52 CLA 1.97.1.12 GO:0000287 ... P29254 30662446
    53 6hqb:B (4.0) BS01 CLA 1.97.1.12 GO:0000287 ... P29255 30662446
    54 6hqb:B (4.0) BS02 CLA 1.97.1.12 GO:0000287 ... P29255 30662446
    55 6hqb:B (4.0) BS03 CLA 1.97.1.12 GO:0000287 ... P29255 30662446
    56 6hqb:B (4.0) BS04 CLA 1.97.1.12 GO:0000287 ... P29255 30662446
    57 6hqb:B (4.0) BS05 SF4 1.97.1.12 GO:0000287 ... P29255 30662446
    58 6hqb:B (4.0) BS06 CLA 1.97.1.12 GO:0000287 ... P29255 30662446
    59 6hqb:F (4.0) BS01 CLA ? GO:0009522 ... P29256 30662446
    60 6hqb:F (4.0) BS02 CLA ? GO:0009522 ... P29256 30662446
    61 6hqb:J (4.0) BS01 CLA ? GO:0009522 ... Q55329 30662446
    62 6hqb:J (4.0) BS02 CLA ? GO:0009522 ... Q55329 30662446
    63 6hqb:K (4.0) BS01 CLA ? GO:0009522 ... P74564 30662446
    64 6hqb:L (4.0) BS01 CLA ? GO:0009522 ... P37277 30662446
    65 6hqb:L (4.0) BS02 CLA ? GO:0009522 ... P37277 30662446
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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