BioLiP

Download all results in tab-seperated text for 13 receptor-ligand interactions, whose format is explained at readme.txt.

Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.

Click Site # to view the binding site structure. Hover over Site # to view the binding residues.

The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.

Hover over EC number to view the full name of enzymatic activity.

Hover over GO terms to view all GO terms.

Hover over UniProt to view the protein name.

<< < 1 > >>

#	PDB (resolution)	Site #	RNA sequence	EC number	GO terms	UniProt	PubMed
1	6lqt:3D (4.9)	BS02	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000154 ...	Q12460	32943522
2	6lqt:3E (4.9)	BS02	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000447 ...	Q12499	32943522
3	6lqt:5C (4.9)	BS02	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000447 ...	P40055	32943522
4	6lqt:A4 (4.9)	BS01	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000462 ...	Q06679	32943522
5	6lqt:A9 (4.9)	BS01	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000049 ...	P38882	32943522
6	6lqt:AE (4.9)	BS01	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000447 ...	P42945	32943522
7	6lqt:AF (4.9)	BS01	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000462 ...	Q04305	32943522
8	6lqt:AG (4.9)	BS02	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000462 ...	Q02931	32943522
9	6lqt:B1 (4.9)	BS02	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000028 ...	P25635	32943522
10	6lqt:B6 (4.9)	BS01	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000447 ...	Q02354	32943522
11	6lqt:B8 (4.9)	BS01	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000292 ...	P40362	32943522
12	6lqt:BE (4.9)	BS02	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0003674 ...	Q06078	32943522
13	6lqt:RQ (4.9)	BS01	>6lqt:5A (identical to 6lqs:5A) ugcgaaagcaguugaagacaaguggcuugucguucguuaauggccucgca gcgaaggauuugguggauuacuagcuaauagcaaucuaggaaacucaaag agugcuaugcggagugcgcgagagcauuuccggcagcagagauuucagcu gu <<<....>>>...<<<<<<<<<...>>>>>>.>>>............... .......................<<<...>>>.................. .........<<<<<<<<......>>>>.>>>>.<<<<.<<<..>>>.>>> >.	?	GO:0000447 ...	Q04500	32943522