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BioLiP
Download all results in tab-seperated text for 68 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6uzv:0 (3.1) BS05 CLA ? GO:0005886 ... P37277 33077842
    2 6uzv:0 (3.1) BS06 CLA ? GO:0005886 ... P37277 33077842
    3 6uzv:1 (3.1) BS44 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    4 6uzv:1 (3.1) BS45 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    5 6uzv:1 (3.1) BS46 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    6 6uzv:1 (3.1) BS47 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    7 6uzv:1 (3.1) BS48 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    8 6uzv:1 (3.1) BS49 CLA 1.97.1.12 GO:0000287 ... P29254 33077842
    9 6uzv:2 (3.1) BS01 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    10 6uzv:2 (3.1) BS02 CL0 1.97.1.12 GO:0009522 ... P29255 33077842
    11 6uzv:2 (3.1) BS03 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    12 6uzv:2 (3.1) BS04 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    13 6uzv:2 (3.1) BS05 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    14 6uzv:2 (3.1) BS06 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    15 6uzv:2 (3.1) BS07 SF4 1.97.1.12 GO:0009522 ... P29255 33077842
    16 6uzv:2 (3.1) BS08 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    17 6uzv:2 (3.1) BS09 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    18 6uzv:2 (3.1) BS10 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    19 6uzv:2 (3.1) BS11 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    20 6uzv:2 (3.1) BS12 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    21 6uzv:2 (3.1) BS13 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    22 6uzv:2 (3.1) BS14 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    23 6uzv:2 (3.1) BS15 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    24 6uzv:2 (3.1) BS16 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    25 6uzv:2 (3.1) BS17 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    26 6uzv:2 (3.1) BS18 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    27 6uzv:2 (3.1) BS19 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    28 6uzv:2 (3.1) BS20 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    29 6uzv:2 (3.1) BS21 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    30 6uzv:2 (3.1) BS22 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    31 6uzv:2 (3.1) BS23 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    32 6uzv:2 (3.1) BS24 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    33 6uzv:2 (3.1) BS25 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    34 6uzv:2 (3.1) BS26 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    35 6uzv:2 (3.1) BS27 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    36 6uzv:2 (3.1) BS28 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    37 6uzv:2 (3.1) BS29 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    38 6uzv:2 (3.1) BS30 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    39 6uzv:2 (3.1) BS31 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    40 6uzv:2 (3.1) BS32 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    41 6uzv:2 (3.1) BS33 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    42 6uzv:2 (3.1) BS34 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    43 6uzv:2 (3.1) BS35 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    44 6uzv:2 (3.1) BS36 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    45 6uzv:2 (3.1) BS37 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    46 6uzv:2 (3.1) BS38 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    47 6uzv:2 (3.1) BS39 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    48 6uzv:2 (3.1) BS40 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    49 6uzv:2 (3.1) BS41 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    50 6uzv:2 (3.1) BS42 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    51 6uzv:2 (3.1) BS43 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    52 6uzv:2 (3.1) BS44 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    53 6uzv:2 (3.1) BS45 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    54 6uzv:2 (3.1) BS46 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    55 6uzv:2 (3.1) BS47 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    56 6uzv:2 (3.1) BS48 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    57 6uzv:2 (3.1) BS49 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    58 6uzv:2 (3.1) BS50 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    59 6uzv:2 (3.1) BS51 PQN 1.97.1.12 GO:0009522 ... P29255 33077842
    60 6uzv:2 (3.1) BS52 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    61 6uzv:2 (3.1) BS53 CLA 1.97.1.12 GO:0009522 ... P29255 33077842
    62 6uzv:6 (3.1) BS03 CLA ? GO:0009522 ... P29256 33077842
    63 6uzv:6 (3.1) BS04 CLA ? GO:0009522 ... P29256 33077842
    64 6uzv:7 (3.1) BS03 CLA ? GO:0009522 ... Q55329 33077842
    65 6uzv:9 (3.1) BS01 CLA ? GO:0009522 ... P72986 33077842
    66 6uzv:h (3.1) BS01 CLA ? GO:0009522 ... Q55330 33077842
    67 6uzv:h (3.1) BS02 CLA ? GO:0009522 ... Q55330 33077842
    68 6uzv:l (3.1) BS07 CLA ? GO:0005886 ... P37277 33077842
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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