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BioLiP
Download all results in tab-seperated text for 18 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6yez:1 (2.7) BS01 CLA N/A GO:0009765 ... N/A 33020607
    2 6yez:1 (2.7) BS02 CLA N/A GO:0009765 ... N/A 33020607
    3 6yez:1 (2.7) BS03 CLA N/A GO:0009765 ... N/A 33020607
    4 6yez:1 (2.7) BS04 CLA N/A GO:0009765 ... N/A 33020607
    5 6yez:1 (2.7) BS05 CLA N/A GO:0009765 ... N/A 33020607
    6 6yez:1 (2.7) BS06 CLA N/A GO:0009765 ... N/A 33020607
    7 6yez:1 (2.7) BS07 CLA N/A GO:0009765 ... N/A 33020607
    8 6yez:1 (2.7) BS08 CLA N/A GO:0009765 ... N/A 33020607
    9 6yez:1 (2.7) BS09 CLA N/A GO:0009765 ... N/A 33020607
    10 6yez:1 (2.7) BS10 CLA N/A GO:0009765 ... N/A 33020607
    11 6yez:1 (2.7) BS11 CHL N/A GO:0009765 ... N/A 33020607
    12 6yez:1 (2.7) BS12 CLA N/A GO:0009765 ... N/A 33020607
    13 6yez:1 (2.7) BS13 CHL N/A GO:0009765 ... N/A 33020607
    14 6yez:1 (2.7) BS14 CLA N/A GO:0009765 ... N/A 33020607
    15 6yez:1 (2.7) BS15 CLA N/A GO:0009765 ... N/A 33020607
    16 6yez:1 (2.7) BS16 CHL N/A GO:0009765 ... N/A 33020607
    17 6yez:4 (2.7) BS01 CLA ? GO:0009765 ... Q9SQL2 33020607
    18 6yez:4 (2.7) BS02 CHL ? GO:0009765 ... Q9SQL2 33020607
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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